Abstract
Metastatic melanoma is a highly lethal type of skin cancer and is often refractory to all traditional chemo-therapeutic agents. Key insights into the genetic makeup of melanoma tumors have led to the development of promising targeted agents. An activated RAS pathway, anchored by oncogenic BRAF, appears to be the central motor driving melanoma proliferation. Although recent clinical trials have brought enormous hope to patients with melanoma, adverse effects and novel escape mechanisms of these inhibitors have already emerged. Definition of the limits of the first successful targeted therapies will provide the basis for further advances in management of disseminated melanoma. In this review, the current state of targeted therapy for melanoma is discussed, including the potent BRAFV600E inhibitor vemurafenib.
Current therapies for melanoma
The incidence of melanoma has rapidly increased over the past several decades [1]. Approximately 10% of all patients who are diagnosed with melanoma eventually die from this cancer [2]. When it becomes metastatic, melanoma often leads to death within a year [3,4], a dismal prognosis that has resulted from a lack of highly curative therapies for advanced disease [1].
The United States Food and Drug Administration (FDA) has approved few therapies for metastatic melanoma, all of which have minimal beneficial effects on patient survival [5,6]. Many of these have been immunologic in nature, including interferon (IFN)-α2b, high-dose interleu-kin (IL)-2 and, as of March 2011, ipilumimab. IFN-α2b is associated with a 10–15% reduction in the risk of relapse in the adjuvant setting, whereas IL-2 produces objective response in 15% of metastatic patients [6–10]. An older FDA-approved melanoma therapy is the alkylating agent dacarbazine (DTIC), which achieves responses in less than 10% of patients [11], a profile similar to other available agents such as carmustine (BCNU), temozolomide, tax-anes and platinum analogs [6,12–14]. In the face of these limited options, there has been a sea change in melanoma treatments ushered in by recent molecular advances.
Targeted agents aimed at oncogenic drivers that have been identified over the past decade provide an opportunity for novel melanoma therapeutics [15,16]. This review focuses on the central molecular network that fuels melanoma growth and recent drug development progress towards targeting these key proteins and signaling pathways.
The central melanoma axis and therapeutic targets
Over the past decade, much has been learned about genetic lesions that stimulate growth and signaling pathways in melanomas [17]. As shown in Figure 1, many components of the RAS pathway are either activated through oncogenic mutations or inactivated through deleterious alterations. From this composite view, activation of a KIT–NRAS–BRAF–MEK–ERK central axis (Figure 1, shaded in green) seems to be crucial in almost all forms of melanoma. Figure 1 also lists some of the drugs in the pipeline for inhibiting various components of the pathway.
Receptor tyrosine kinases (RTKs)
A number of growth factor RTKs such as EGFR, PDGFR and KIT are expressed in melanoma cells, although recurrent activating mutations are uncommon. One lineage-derived RTK is c-KIT, a receptor known to be crucial in melanocyte differentiation but whose expression appears to be lost in many melanomas [18,19]. A more direct role for c-KIT was recently recognized when genomic screens revealed that the KIT locus (chromosome 4q11) was amplified and/or mutated in a subset of mucosal, acral and chronically sun-damaged (CSD) melanomas (MACs) [20]. Approximately 10–20% of these melanomas harbor the same activating KIT mutations described in gastrointestinal stromal tumors (GISTs) [20–24].
The earlier successes of imatinib in c-KIT-mutated GISTs suggested that MAC melanomas may be particularly vulnerable to c-KIT inhibitors. The idea was initially bolstered by reports of several melanoma cases treated with imatinib [25,26]. These clinical results were subsequently confirmed in other melanoma cell lines sustained by an activating c-KIT mutation or an SCF–c-KIT autocrine loop [21,27]. Imatinib has minimal inhibitory effects on melanoma cell lines containing the BRAFV600E mutation despite evidence of c-KIT expression; furthermore, the mere presence of c-KIT receptor expression does not seem to predict response [28,29]. Thus, it appears that the potential clinical role of c-KIT inhibitors is probably restricted to those melanomas that have activating mutations and consequent c-KIT-dependent signaling. Interestingly, response seems to correlate with the site of mutation in c-KIT. For example, melanomas withmutations in the juxtamembrane region of c-KIT are associated with a better response to imatinib treatment [28]. Because imatinib is not c-KIT-specific, it is possible that a more selective agent could achieve a greater degree of inhibition and result in more profound responses.
Reports on two open-label Phase II trials of imatinib mesylate for KIT-mutated melanomas have recently been published. In the first trial, Carvajal et al. treated 28 patients who developed metastatic melanoma from MAC sites with 400 mg of imatinib twice daily [30]. There were 2 complete responses (CRs) lasting 94 and 95 weeks, 2 durable partial responses (PRs) lasting 53 and 89 weeks, and 2 transient PRs lasting 12 and 18 weeks among 25 evaluable patients. The median progression-free survival (PFS) was 12 weeks, with a median overall survival (OS) of 46.3 weeks. At a molecular level, 23.4% of the cases harbored either KIT mutations or amplifications, whereas 27.8% of the tumors actually contained either BRAF or NRAS mutations. The most significant responses occurred in patients with KITk642E or KITL576P variants and those with a mutant/allele ratio >1, that is, tumors with greater activated KIT dependence. In the second trial, Guo et al. treated 43 metastatic melanoma patients with 400 mg of imatinib per day unless intolerable toxicity or disease progression occurred [31]. Eligibility in the Guo trial required KIT aberrations defined as mutations in exons 9,11, 13,17, or 18 and/or increases in copy number. Overall, PRs, stable disease and progressive disease were observed in 10 patients (23.3%), 13 patients (30.2%) and 20 patients (46.5%), respectively. The 6-month PFS and 1-year OS rates were 36.6% and 51.0%, respectively. The median PFS time was 3.5 months (range 1.3–5.7 months) and the OS time was 14.0 months (range 10.8–17.2 months). There were no clear-cut associations between outcome and KIT mutation characteristics. Although the overall benefits of imatinib in these studies are encouraging, albeit modest, other RTK inhibitors (e.g. sunitinib, nilotinib and dasatanib) are emerging (Table 1) and may prove more efficacious in trials. For instance, a current Phase III trial is comparing nilotinib to dacarbazine (NCT01028222) in patients with KIT-mutated metastatic melanoma (exons 9, 11 or 13, or exon 17 mutations p.Tyr822Asp, p.Asp820Tyr, or p.Tyr823Asp). Masitinib is another potent and highly selective oral RTK inhibitor that has combined activity against both c-KIT and LYN. A recent small study showed some effect against another KIT-mediated disease, systemic mastocytosis [32], and a Phase III trial of masitinib for metastatic melanomas with juxtamembrane mutations is also currently enrolling patients (NCTO1280565).
Table 1.
Drug | Targets | Stage of clinical development |
---|---|---|
Imatinib (Gleevec, STI571) | KIT, ABL, PDGFR, NQO2 [84], V-ATPase [85] | Approved for CML and GIST [86] |
Sunitinib (SU11248) | KIT, PDGFR, VEGFR [87] | Approved for RCC and GIST [87] |
Nilotinib | KIT, ABL, LCK, NQO2, DDR1 [84] | Approved for CML [88] |
Dasatanib (BMS-354825) | KIT, ABL, SRC [89], DDR1, BTK, TEC [84] | Approved for CML [90] |
Tipifarnib (R115777) | RAS and other proteins that require farnesyl transferase [91] |
Phase II/III [91] |
Salirasib (FTS) | RAS, mTOR [92] | Phase II [43] |
Sorafenib (BAY 43-9006) | BRAF | Approved for RCC and HCC Failed at phase II for advanced melanoma [52] |
PLX4720 | BRAF, CRAF, VEGF, PDGF, FLT3, KIT [46] | Precursor of PLX4032 |
Vemurafenib (PLX4032) | BRAFV600E, BRAFWT, BRK [56] | Phase III [61] |
GSK2118436 | BRAFV600E, CRAF, BRAFWI, ARAF, ACK1, SRMS and MAP4K5 [57,58] |
Phase I/II [68] |
PD0325901 | MEK | Phase II [75] |
AZD6244 (ARRY-142886) | MEK | Phase II [93] |
Anthrax lethal toxin | MEK | |
GSK1120212 (JTP-74057) | MEK | Phase III |
Prickett and colleagues recently scanned the tyrosine kinome and identified mutations in ERBB4 in 19% of melanoma cases, although there were no mutational hot-spots [33]. The alterations were clearly oncogenic in several in vitro phenotypes, such as NIH-3T3 transformation and soft-agar growth. Furthermore, inhibition of ERBB4 by lapatinib induced apoptosis, especially in ERBB4-mu-tated cells. These recent findings have led to a Phase II trial of lapatinib in stage IV melanoma for patients with ERBB4-mutated melanomas (NCT01264081).
RAS inhibitors
NRAS is the second most commonly activated oncogene in melanoma after BRAF. Like other RAS protein members, activating changes occur on p.Glyl2 or p.Gln61. The potential of NRAS as a therapeutic target has been validated in preclinical models with siRNA [34], but potent and selective pharmacologic inhibitors are not readily available. The first group of compounds used to target RAS were farnesyl transferase inhibitors (FTIs), such as R115777 (tibifarnib; Figure 1). The FTIs were designed to block the post-translational lipid modification of RAS that is required for full RAS activity [35]. FTIs inhibit tumor growth in preclinical models [36], although their performance in the clinical trial setting has been lackluster [37]. The prevailing hypothesis for the lack of efficacy is that FTIs inhibit a large family of proteins that require farnesylation as a post-translational modification. Thus, it is not possible to achieve sufficient downregulation of RAS without profoundly impairing the function of other farnesylated proteins, a fact that is responsible for the dose-limiting toxicity of these agents. Furthermore, KRAS and NRAS can circumvent FTIs by employing geranylgeranyltransferases in cells and thereby maintaining their function in the presence of FTIs. Nevertheless, it remains possible that FTIs might still enhance the effect of other chemotherapeutic agents in melanoma, as shown in at least one preclinical study [38].
Salirasib (S-trans,trans-farnesylthiosalicylic acid, FTS) belongs to another group of RAS antagonists and mimics the carboxy-terminal farnesylcysteine that is common to all three RAS isoforms [39]. Thus, FTS competes with the active, GTP-bound forms of RAS proteins for specific binding sites on the cytoplasmic membrane [40] and inhibits melanoma cell growth in vitro and in xenograft models [41,42]. Initial results from recent clinical trials with pancreatic cancer patients support the ability of FTS to suppress RAS function and possibly mediate survival benefits [43,44]. These preliminary results require validation in larger patient populations and randomized trials. RAS inhibitors still hold unrealized potential as a therapeutic approach for melanoma, especially for the ∼20% of tumors in which activating mutations are found.
RAF inhibitors
As mentioned above, the most prevalent alteration in cutaneous melanoma is activation of the serine/threonine protein kinase BRAF [45], which makes BRAF a veritable target in the therapeutic landscape. Overall, approximately 40–50% of uncultured cutaneous melanomas harbor BRAF mutations, with the p.Val600Glu missense mutation (BRAFV600E), which lies in the CR3 kinase domain (Figure 2), comprising ≥90% of reported mutations.
The first BRAF inhibitor that progressed to clinical trial was sorafenib, which targets multiple protein kinases including BRAF, CRAF and the VEGF and PDGF RTKs (Figure 1) [46]. Sorafenib has minimal activity as a single agent in melanoma, although initial results were more encouraging when it was combined with carboplatin and paclitaxel or temozolomide [47–49]. However, the activity of the combination regimen did not correlate with BRAF mutational status. A Phase III trial of sorafenib in combination with carboplatin and paclitaxel in patients with advanced melanoma failed to improve overall survival [50]. The failure of sorafenib has been attributed in part to incomplete MAP kinase inhibition at the maximum tolerated dose [51] and to compensatory RAF–MEK–ERK signaling [52] or other escape mechanisms [53,54]. A recent study challenged the entire notion that sorafenib works through BRAF in vivo. Whittaker et al. engineered cells with a gatekeeper mutation (p.Thr529Asn or p.T529N) that rendered BRAFT529N/V600E cells resistant to sorafenib in vitro and yet sensitive to sorafenib in vivo. By contrast, truly selective BRAF inhibitors (SBIs) such as PLX4720 (see below) lost their effectiveness both in vitro and in vivo when the gatekeeper mutation was introduced. This suggests that sorafenib has BRAF-independent anti-tumor activity and may also explain why sorafenib causes side effects at a dose that does not efficiently inhibit MEK signaling [55].
More selective BRAF inhibitors have been synthesized over the past few years. The first of these, PLX4720, selectively inhibits BRAFV600E (IC50=13 nM vs 160 nM for wild-type BRAF, BRAFWT) and has been thoroughly tested and validated in preclinical BRAFV600E models [56]. The clinical compound vemurafenib (PLX4032; Figure 2), which is an analog of PLX4720, shows higher selectivity for BRAFV600E (IC50=31 nM) and CRAF (IC50=48 nM) than wild-type BRAF (IC50=100 nM) [57]. These in vitro parameters, however, do not necessarily predict drug activity in vivo, where signaling networks may produce more dynamic physiologic responses. Furthermore, vemurafenib, at least in vitro, also inhibits several other protein kinases, such as ACK1, SRMS and MAP4K5 [58], with similar potency (IC50<50 nM) compared with BRAFV600E. Although speculative, suppression of these secondary targets could potentially contribute to the observed responses [58] and more investigation is needed to understand the consequences of these off-target effects.
The clinical efficacy of vemurafenib in melanoma patients with BRAFV600E mutations has been firmly established through three trials. The objective response exceeded 50% among those treated at the higher doses in the Phase I trial and an even higher response rate was obtained when a cohort of patients received the recommended Phase II dose [59,60]. Correlative studies also demonstrated that doses of vemurafenib that lead to >90% reductions in ERK phosphorylation are required to achieve a meaningful clinical response [58]. The pivotal Phase III study (BRIM-3) enrolled 675 patients with previously untreated metastatic melanoma that could not be surgically removed [61]. Patients with BRAFV600E-mutated tumors were randomly assigned to receive either vemur-afenib (960 mg orally twice daily) or dacarbazine. At the 6-month evaluation, OS was 84% in the vemurafenib group (n=336) and 64% in the dacarbazine group (n=336; hazard ratio 0.37, p<0.001). The hazard ratio for tumor progression in the vemurafenib group was 0.26 (p<0.001) and the estimated median PFS was 5.3 months in the vemurafenib group and 1.6 months in the dacarbazine group. The objective response rate for individuals treated with vemurafenib was 48% compared to 5% for dacarbazine-treated patients (p<0.001). As observed in earlier trials, kerati-nocytic neoplasms (cutaneous squamous cell carcinomas or a related entity, keratoacanthoma) developed in 18% of patients treated with vemurafenib. BRIM-3 represents the first prospective randomized molecular therapy trial in melanoma and the first to demonstrate a convincing survival benefit. Although its importance cannot be overstated, there are several lingering challenges worth addressing. First, patients with BRAFWT tumors are not eligible for vemurafenib and are in desperate need of effective agents. Second, although 48% of the patients showed an objective response, a significant fraction of BRAF-mutated tumors did not reach the RECIST criteria and therefore seem to be innately insensitive to vemurafenib; it will be important to identify these primarily resistant tumors through secondary biomarkers beyond BRAF status. Third, nearly all patients relapse with time despite ongoing treatment, and thus OS after longer follow-up will be important to establish the true rate of cure.
Secondary resistance in RAF-mutated tumors
One of the most pressing and exciting areas of investigation is the elucidation of primary and secondary resistance mechanisms. Biochemical and genetic studies into the development of resistance have largely focused on two specific questions: why is MEK–ERK signaling paradoxically activated by SBIs in RAS-mutated cells, and how do BRAF-mutated cells gain resistance to SBIs amid chronic suppression? There are at least two models that address the first question and both invoke RAF dimerization, although the two models differ in their molecular details (Figure 3) [57,62]. In response to growth factor receptor activation or an oncogenic RAS mutation, the RAS protein binds GTP, is activated (RAS*-GTP; Figure 3), localizes to the plasma membrane and induces homodimerization and heterodimerization of BRAF and CRAF. In cells driven by a BRAFV600E mutation, RAS activation is bypassed and signal initiation occurs in the cytoplasm; MEK phosphorylation results from constitutive BRAF activity. Consequently, an SBI attenuates nearly all downstream MEK–ERK signal propagation. However, in BRAFWT cells, this molecular assembly at the cellular membrane is a crucial step for subsequent MEK phosphorylation and downstream signaling. One unexpected observation is the paradoxical MAPK pathway stimulation by SBIs in WT BRAF cells [57,62]. How does this occur? In one model (Figure 3b), low concentrations of a RAF inhibitor inactivate only a single monomer in the RAF dimer; dimerization still transactivates the uninhibited partner RAF molecule and triggers MAPK signaling [57]. Higher RAF inhibitor levels lead to inhibition of both RAF partners and all signaling is suppressed. In a second model (Figure 3c) [62], WT BRAF remains largely inactive in the cytoplasm of RAS*-GTP cells until it binds an SBI. The SBI-bound BRAFWT then translocates to the cell membrane where it dimerizes with CRAF, further stimulating CRAF signaling. A pan-RAF inhibitor (PRI) suppresses both BRAF and CRAF and thereby abrogates all MAPK signaling. Gatekeeper CRAF mutations, such as CRAF Thr421Asn, could disrupt binding of the PRI to CRAF and restore signaling. The implication for both models is that RAS-mutated cells may in fact be stimulated by an SBI, which could explain the observed squamous cell carcinomas that develop while on vemurafenib. Thus, the use of vemurafenib requires absolute genetic precision.
Several recent reports have also shed light on possible mechanisms that are responsible for resistance to vemurafenib (Figure 3). For example, reactivation of the ERK pathway by an NRAS mutation confers secondary resistance to vemurafenib, as functionally shown in a relapse-derived cell line and verified in a clinically resistant melanoma sample [63]. In another study, Johannessen et al. undertook a kinome-wide screen for molecules that could confer resistance to PLX4720 and identified both CRAF and the kinase MAP3K8 (COT, TPL2) [64]. Naїve melanoma cell lines with elevated COT levels exhibit de novo resistance to PLX4720 and 2 of 3 melanoma samples taken from patients early in the course of therapy or at the time of progression also had increased COT expression. Finally, a more recent report identified a MEK1 mutation in a single tumor that had become resistant to vemurafenib [65].
Interestingly, ERK reactivation may not to be the only means of acquiring vemurafenib resistance. Nazarian et al. found that PDGFRβ upregulation can be associated with vemurafenib resistance in the absence of ostensible ERK activation [63]. There is biochemical evidence to suggest that AKT activation is correlated with heightened PDGFRβ expression, although other unidentified downstream effectors may also play a role. Similarly, Villanueva et al. reported that increased IGF receptor signaling may also be correlated with acquired SBI resistance [66].
There are several other BRAF inhibitors currently in clinical development (Figure 1 and Table 1) [67]. GSK2118436 is a BRAF inhibitor that showed promising results in an early clinical trial [68]. Interestingly, regression of brain metastasis after treatment with GSK2118436 has been observed in several patients. A Phase II clinical trial is now ongoing to test its effect in melanoma patients with BRAF mutation (NCT01266967).
CRAF may also be an effective target for melanoma therapy [69,70], particularly in BRAFWT cells, because CRAF seems to be the key mediator of MEK activation in NRAS-mutated melanomas [71]. PRIs may be more relevant for NRAS-mutated melanomas and non-V600E BRAF mutants, which tend to activate MEK through CRAF signaling [71,72].
MEK inhibitor
MEK is the major downstream molecule of oncogenic BRAF. An early study found that melanoma cells with BRAF mutations tend to be more sensitive to MEK inhibitors than those with NRAS mutations [73]. Therefore, BRAF mutational status may also predict sensitivity to MEK inhibitors in the clinic.
MEK inhibitors reduce proliferation, colony formation and invasiveness of BRAFV600E mutant human melanoma cells in vitro and tumor growth in vivo [74]. Several MEK inhibitors have been investigated in clinical trials in which patients with advanced melanoma were treated (Figure 1). PD0325901 was evaluated in a Phase I trial: 2 of 27 patients had an objective response and another 5 patients showed disease stabilization [67]. However, dose-limiting side effects such as diarrhea and rash precluded the high amount of target inhibition required to adequately suppress the MAPK pathway in tumor cells. Because MEK inhibitors inhibit MAPK pathway signaling in normal cells as well as tumor cells, it may not be possible to achieve sufficient target effects in tumors owing to normal tissue toxicity at the drug concentrations required. Phase II trials of PD0325901 in non-small-cell lung cancer were suspended because of limited activity and intolerable side effects such as visual disturbances [75]. In a recent Phase I trial, another MEK inhibitor, AZD6244, showed only moderate effects in a very small subgroup of patients with metastatic melanoma harboring BRAFV600E mutations [76]. However, in the follow-up phase II trial with AZD6244, 12% of patients whose tumors harbored BRAFV600E showed significant tumor regression, although the regression was not complete [67]. This limited response may be due to insufficient target inhibition or failure to induce cell death. In vitro studies have also demonstrated that BRAF/MEK inhibitors lead to mainly cytostatic effects in BRAFV600E-mutated melanoma cells [56,73,77] and therefore AZD6244 may not be adequate as a single agent in melanoma treatment. GSK1120212 is an allosteric MEK inhibitor [78] that showed promising antitumor activity in a Phase I clinical trial [79] and is now being evaluated in a Phase III trial (NCT01245062). Finally, the lethal toxin anthrax, which selectively degrades and inactivates MEK1 and MEK2 [80], is also being tested in melanoma clinical trials [53].
Concluding remarks
It is clear that single-agent approaches in melanoma are not capable of achieving a cure, a finding that is not surprising given the genetic complexity of melanomas and the concomitant activation of multiple signaling pathways. The experience with BRAF inhibitors has demonstrated that melanoma often resurrects itself, even after the main growth signals are abrogated. Therefore, simultaneous targeting of several pathways is likely to result in better outcomes. The redundancy within the multiple signaling pathways activated in melanoma, such as PTEN loss with consequent AKT activation, raises the possibility of combining MAPK and AKT pathway inhibitors in new formulations. Studies have shown that PI3K and MEK inhibitors synergize to reduce growth and survival of melanoma cells in 3D cell culture systems [81,82] and thus larger signaling networks may need to be considered. Moreover, melanomas with BRAFV600E often have other genetic disruptions in molecules such as cyclin D1, CDK2, CDK4, MITF and AKT3 [67], which suggests that additional inhibitor combinations may enhance efficacy.
Melanomas are genetically heterogeneous, and the use of personalized cancer therapy has already been demonstrated in this cancer. To maximize success, future targeted therapy may need to be tested in patients for whom the relevant combination of genetic aberrations in the tumors have been predetermined.
Acknowledgments
We want to thank the National Institutes of Health (K24 CA149202 to H.T.), the Melanoma Research Alliance, the American Skin Association and the generous donors to the Massachusetts General Hospital Millennium Melanoma Fund for their support during the writing of this review.
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