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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 Jun 15;69(Pt 7):o1097. doi: 10.1107/S1600536813016048

5-Bromo-4-(3,5-di­bromo-2-hy­droxy­phen­yl)-2-(piperidin-1-yl)-1,3-di­thiol-2-ylium bromide

Paul Chirita a, Cristian G Hrib b, Lucian M Birsa c,*
PMCID: PMC3770374  PMID: 24046659

Abstract

In the title salt, C14H13Br3NOS2 +·Br, synthesized by bromination of mesoionic 2-[2-(piperidin-1-yl)-1,3-di­thiol-2-ylium-4-yl]phenolate in glacial acetic acid, the dihedral angle between the 1,3-di­thiol­ium ring and the phenolic substituent ring is 45.9 (3)° due to the steric influence of the ortho-Br group on the 1,3-di­thiol­ium ring. The piperidine ring adopts a chair conformation. In the crystal, the cation and anion are linked by an O—H⋯Br hydrogen bond.

Related literature  

For applications of 1,3-di­thiol­ium salts, see: Narita & Pittman (1976); Bryce (2000); Birsa & Ganju (2003); For the structure of 2-ethyl­thio-4,5-bis­(tri­fluoro­meth­yl)-1,3-di­thiol-2-ylium hexa­chloro­stibiate, see: Frasch et al. (1993)graphic file with name e-69-o1097-scheme1.jpg

Experimental  

Crystal data  

  • C14H13Br3NOS2 +·Br

  • M r = 595.01

  • Monoclinic, Inline graphic

  • a = 10.484 (2) Å

  • b = 7.9240 (16) Å

  • c = 21.396 (4) Å

  • β = 95.16 (3)°

  • V = 1770.4 (6) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 9.33 mm−1

  • T = 153 K

  • 0.26 × 0.13 × 0.05 mm

Data collection  

  • Stoe IPDS 2T area-detector diffractometer

  • Absorption correction: for a sphere [modified Dwiggins (1975)] T min = 0.047, T max = 0.073

  • 19422 measured reflections

  • 4399 independent reflections

  • 3413 reflections with I > 2σ(I)

  • R int = 0.132

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.061

  • wR(F 2) = 0.137

  • S = 1.08

  • 4399 reflections

  • 200 parameters

  • H-atom parameters constrained

  • Δρmax = 1.52 e Å−3

  • Δρmin = −1.03 e Å−3

Data collection: X-AREA (Stoe & Cie, 2002); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813016048/zs2264sup1.cif

e-69-o1097-sup1.cif (18.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813016048/zs2264Isup2.hkl

e-69-o1097-Isup2.hkl (215.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813016048/zs2264Isup3.cdx

Supplementary material file. DOI: 10.1107/S1600536813016048/zs2264Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O—H0⋯Br4 0.84 2.30 3.120 (5) 167

Acknowledgments

Part of this work was supported by a grant of the Romanian National Authority for Scientific Research, CNDI– UEFISCDI, project No. 51/2012.

supplementary crystallographic information

Comment

1,3-Dithiolium salts are well known precursors of tetrathiafulvalenes (Narita & Pittman, 1976), which in turn are notable π-electron donors in organic superconductors (Bryce, 2000). Of special interest are systems where the donor moiety is linked through a σ- or π-bonded bridge to the acceptor moiety. In this context, it has been shown that 1,3-dithiolium ions can also serve as acceptor moieties in intramolecular charge-transfer systems (Birsa & Ganju, 2003). The title compound, C14H13Br3NOS2+ Br-, has been synthesized in good yield (84%), by bromination of mesoionic 2-[2-(piperidin-1-yl)-1,3-dithiol-2-ylium-4-yl]phenolate in glacial acetic acid. In this salt (Fig. 1), the benzene and 1,3-dithiolium planes form a dihedral angle of 45.9 (3) °, this deviation from planarity most likely being due to the bulky bromine substituent in the 5-position of 1,3-dithiolium ring. Moreover, no hydrogen bond was found between the phenolic O—H group and the S2 atom. Instead, a hydrogen bond between the O—H group and the bromide counter-anion is present (Table 1). Also present in the crystal is a weak intermolecular C13—H···Br2i hydrogen bond [3.836 (7) Å], a short intermolecular Br3···Br4ii interaction [3.3062 (11) Å] and a weak dithiolium to phenyl ring π–π interaction [minimum ring centroid separation, 3.801 (4) Å] [for symmetry code (i) -x + 1, y + 1/2, -z + 1/2; (ii) -x + 1, y - 1/2, -z + 1/2].

Experimental

To a solution of 0.277 g (1 mmol) of 2-[2-(piperidin-1-yl)-1,3-dithiol-2-ylium-4-yl]phenolate (Birsa & Ganju, 2003) in 20 ml of glacial acetic acid, a solution of 0.15 ml (3 mmol) of bromine in 2 ml of glacial acetic acid was added dropwise. After complete consumption of the bromine the reaction mixture was poured into water and the precipitate filtered off. Crystallization from ethanol give 0.5 g (84%) of pure product as colorless crystals [m.p. 501–502 K (dec.)]. IR (ATR): νmax 2946, 2764, 2551, 1567, 1523, 1439, 1248, 1229, 868, 852, 687 cm-1. 1H NMR (300 MHz, DMSO-d6): δ = 1.77 (m, 6H, 3CH2), 3.89 (m, 4H, 2CH2-N), 7.55 (d, 4 J=2.1 Hz, 1H), 7.88 (d, 4 J=2.1 Hz, 1H), 10.63 (s, 1H, OH). 13C{1H} NMR (75 MHz, DMSO-d6): δ = 21.6 (t), 24.8 (t), 24.9 (t), 56.5 (t), 57.5 (t), 107.1 (s), 111.4 (s), 113.8 (s), 119.4 (s), 130.3 (s), 133.5 (d), 137.9 (d), 152.5 (s), 184.6 (s).

Refinement

The C-bound H-atoms were included at calculated positions and treated using a riding model, with aromatic C—H = 0.95 Å, and methylene C—H = 0.99 Å, and Uiso(H) = 1.2Ueq(C). The phenolic H-atom (H0) was located in a difference Fourier and was also allowed to ride in the refinement, with Uiso(H) = 1.5Ueq(O).

Figures

Fig. 1.

Fig. 1.

The atom numberimg scheme for the cation and anion species of the title salt. Thermal ellipsoids are drawn at the 50% probability level.

Crystal data

C14H13Br3NOS2+·Br F(000) = 1136
Mr = 595.01 Dx = 2.232 Mg m3
Monoclinic, P21/c Melting point = 501–502 K
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 10.484 (2) Å Cell parameters from 17310 reflections
b = 7.9240 (16) Å θ = 2.6–29.6°
c = 21.396 (4) Å µ = 9.33 mm1
β = 95.16 (3)° T = 153 K
V = 1770.4 (6) Å3 Plate, colourless
Z = 4 0.26 × 0.13 × 0.05 mm

Data collection

Stoe IPDS 2T area-detector diffractometer 4399 independent reflections
Radiation source: fine-focus sealed tube 3413 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.132
Detector resolution: 6.67 pixels mm-1 θmax = 28.3°, θmin = 2.0°
rotation method scans h = −13→13
Absorption correction: for a sphere [modified Dwiggins (1975)] k = −10→9
Tmin = 0.047, Tmax = 0.073 l = −28→28
19422 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.061 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.137 H-atom parameters constrained
S = 1.08 w = 1/[σ2(Fo2) + (0.0656P)2] where P = (Fo2 + 2Fc2)/3
4399 reflections (Δ/σ)max < 0.001
200 parameters Δρmax = 1.52 e Å3
0 restraints Δρmin = −1.03 e Å3

Special details

Experimental. Absorption correction: Interpolation using International Tables Vol. C, Table 6.3.3.3 for values of µR in the range 0-2.5, and International Tables Vol. II, Table 5.3.6B for µR in the range 2.6–10.0. The interpolation procedure (Dwiggins, 1975) is used with some modification.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
N 0.2558 (5) 1.1734 (8) 0.0481 (2) 0.0247 (12)
O 0.6690 (4) 0.9340 (7) 0.1718 (2) 0.0250 (10)
H0 0.7142 0.9925 0.1496 0.038*
Br1 0.93336 (6) 0.89688 (11) 0.24480 (3) 0.03220 (19)
Br2 0.68140 (7) 1.21285 (10) 0.43451 (3) 0.03022 (18)
Br3 0.27602 (6) 0.94400 (9) 0.29348 (3) 0.02288 (16)
Br4 0.80174 (7) 1.19802 (10) 0.09104 (3) 0.03071 (18)
S1 0.20158 (14) 1.0731 (2) 0.16132 (7) 0.0216 (3)
S2 0.46012 (15) 1.1582 (2) 0.13143 (7) 0.0246 (3)
C1 0.5624 (6) 1.0722 (8) 0.2511 (3) 0.0201 (12)
C2 0.6747 (6) 0.9999 (9) 0.2309 (3) 0.0210 (12)
C3 0.7839 (6) 0.9945 (9) 0.2716 (3) 0.0249 (13)
C4 0.7862 (7) 1.0585 (10) 0.3319 (3) 0.0270 (14)
H4 0.8626 1.0542 0.3594 0.032*
C5 0.6763 (7) 1.1286 (9) 0.3516 (3) 0.0249 (13)
C6 0.5634 (6) 1.1376 (8) 0.3120 (3) 0.0219 (12)
H6 0.4886 1.1871 0.3260 0.026*
C7 0.4449 (6) 1.0855 (9) 0.2082 (3) 0.0227 (13)
C8 0.3247 (6) 1.0477 (9) 0.2205 (3) 0.0221 (12)
C9 0.3003 (5) 1.1413 (9) 0.1063 (3) 0.0208 (12)
C10 0.1219 (6) 1.1466 (11) 0.0266 (3) 0.0287 (15)
H10A 0.0709 1.1381 0.0632 0.034*
H10B 0.1126 1.0393 0.0030 0.034*
C11 0.0718 (7) 1.2914 (10) −0.0152 (3) 0.0306 (15)
H11A 0.0750 1.3977 0.0092 0.037*
H11B −0.0185 1.2697 −0.0309 0.037*
C12 0.1533 (8) 1.3085 (11) −0.0705 (3) 0.0340 (16)
H12A 0.1453 1.2047 −0.0963 0.041*
H12B 0.1218 1.4046 −0.0972 0.041*
C13 0.2923 (7) 1.3368 (10) −0.0478 (3) 0.0297 (15)
H13A 0.3015 1.4482 −0.0270 0.036*
H13B 0.3440 1.3383 −0.0843 0.036*
C14 0.3436 (7) 1.2010 (11) −0.0022 (3) 0.0291 (15)
H14A 0.3534 1.0942 −0.0253 0.035*
H14B 0.4291 1.2348 0.0171 0.035*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
N 0.024 (3) 0.033 (3) 0.017 (2) −0.001 (2) −0.0002 (19) 0.003 (2)
O 0.028 (2) 0.029 (3) 0.0191 (19) −0.002 (2) 0.0093 (17) −0.0033 (19)
Br1 0.0235 (3) 0.0384 (4) 0.0354 (3) 0.0043 (3) 0.0065 (3) 0.0071 (3)
Br2 0.0406 (4) 0.0313 (4) 0.0183 (3) −0.0038 (3) −0.0001 (2) −0.0008 (3)
Br3 0.0253 (3) 0.0252 (3) 0.0188 (3) −0.0002 (2) 0.0056 (2) 0.0019 (2)
Br4 0.0434 (4) 0.0259 (4) 0.0247 (3) 0.0012 (3) 0.0133 (3) 0.0004 (3)
S1 0.0211 (6) 0.0256 (8) 0.0184 (6) −0.0011 (6) 0.0037 (5) 0.0009 (6)
S2 0.0218 (7) 0.0335 (9) 0.0186 (6) −0.0036 (6) 0.0024 (5) 0.0035 (6)
C1 0.025 (3) 0.017 (3) 0.018 (2) 0.000 (2) 0.003 (2) 0.002 (2)
C2 0.028 (3) 0.017 (3) 0.018 (2) −0.004 (2) 0.002 (2) −0.001 (2)
C3 0.025 (3) 0.021 (3) 0.029 (3) −0.002 (3) 0.008 (2) 0.002 (3)
C4 0.027 (3) 0.028 (4) 0.025 (3) −0.002 (3) −0.006 (2) 0.005 (3)
C5 0.036 (3) 0.023 (3) 0.015 (2) −0.006 (3) 0.002 (2) −0.001 (2)
C6 0.030 (3) 0.015 (3) 0.021 (3) 0.001 (2) 0.004 (2) 0.000 (2)
C7 0.031 (3) 0.020 (3) 0.017 (3) 0.001 (2) −0.002 (2) 0.000 (2)
C8 0.028 (3) 0.022 (3) 0.016 (2) 0.003 (3) 0.001 (2) 0.000 (2)
C9 0.016 (2) 0.022 (3) 0.024 (3) −0.001 (2) 0.002 (2) 0.000 (2)
C10 0.024 (3) 0.038 (4) 0.025 (3) 0.001 (3) 0.002 (2) 0.002 (3)
C11 0.027 (3) 0.033 (4) 0.033 (3) 0.003 (3) 0.004 (3) 0.002 (3)
C12 0.046 (4) 0.034 (4) 0.022 (3) 0.004 (3) 0.002 (3) 0.007 (3)
C13 0.043 (4) 0.028 (4) 0.018 (3) −0.003 (3) 0.004 (3) 0.000 (3)
C14 0.030 (3) 0.040 (4) 0.017 (3) 0.004 (3) 0.004 (2) 0.004 (3)

Geometric parameters (Å, º)

N—C9 1.314 (8) C4—H4 0.9500
N—C10 1.453 (8) C5—C6 1.394 (9)
N—C14 1.495 (8) C6—H6 0.9500
O—C2 1.365 (7) C7—C8 1.344 (9)
O—H0 0.8400 C10—C11 1.519 (10)
Br1—C3 1.883 (7) C10—H10A 0.9900
Br2—C5 1.892 (6) C10—H10B 0.9900
Br3—C8 1.876 (6) C11—C12 1.527 (10)
Br3—Br4i 3.3063 (11) C11—H11A 0.9900
S1—C9 1.723 (6) C11—H11B 0.9900
S1—C8 1.737 (6) C12—C13 1.511 (11)
S2—C9 1.718 (6) C12—H12A 0.9900
S2—C7 1.761 (6) C12—H12B 0.9900
C1—C6 1.401 (8) C13—C14 1.518 (10)
C1—C2 1.412 (9) C13—H13A 0.9900
C1—C7 1.472 (9) C13—H13B 0.9900
C2—C3 1.375 (9) C14—H14A 0.9900
C3—C4 1.385 (10) C14—H14B 0.9900
C4—C5 1.380 (10)
C9—N—C10 121.5 (5) N—C9—S1 121.6 (5)
C9—N—C14 121.4 (5) S2—C9—S1 116.1 (4)
C10—N—C14 115.7 (5) N—C10—C11 110.5 (6)
C2—O—H0 109.5 N—C10—H10A 109.6
C8—Br3—Br4i 169.9 (2) C11—C10—H10A 109.6
C9—S1—C8 94.7 (3) N—C10—H10B 109.6
C9—S2—C7 95.7 (3) C11—C10—H10B 109.6
C6—C1—C2 119.9 (6) H10A—C10—H10B 108.1
C6—C1—C7 119.3 (6) C10—C11—C12 109.6 (6)
C2—C1—C7 120.8 (5) C10—C11—H11A 109.7
O—C2—C3 122.7 (6) C12—C11—H11A 109.7
O—C2—C1 118.1 (5) C10—C11—H11B 109.7
C3—C2—C1 119.2 (6) C12—C11—H11B 109.7
C2—C3—C4 121.5 (6) H11A—C11—H11B 108.2
C2—C3—Br1 119.2 (5) C13—C12—C11 110.8 (6)
C4—C3—Br1 119.2 (5) C13—C12—H12A 109.5
C5—C4—C3 119.1 (6) C11—C12—H12A 109.5
C5—C4—H4 120.4 C13—C12—H12B 109.5
C3—C4—H4 120.4 C11—C12—H12B 109.5
C4—C5—C6 121.5 (6) H12A—C12—H12B 108.1
C4—C5—Br2 118.3 (5) C12—C13—C14 112.2 (6)
C6—C5—Br2 120.2 (5) C12—C13—H13A 109.2
C5—C6—C1 118.8 (6) C14—C13—H13A 109.2
C5—C6—H6 120.6 C12—C13—H13B 109.2
C1—C6—H6 120.6 C14—C13—H13B 109.2
C8—C7—C1 127.4 (6) H13A—C13—H13B 107.9
C8—C7—S2 114.9 (5) N—C14—C13 111.2 (6)
C1—C7—S2 117.7 (5) N—C14—H14A 109.4
C7—C8—S1 118.7 (5) C13—C14—H14A 109.4
C7—C8—Br3 126.2 (5) N—C14—H14B 109.4
S1—C8—Br3 114.7 (4) C13—C14—H14B 109.4
N—C9—S2 122.3 (5) H14A—C14—H14B 108.0
C6—C1—C2—O 178.5 (6) S2—C7—C8—S1 0.2 (8)
C7—C1—C2—O −3.8 (9) C1—C7—C8—Br3 −7.4 (11)
C6—C1—C2—C3 0.1 (10) S2—C7—C8—Br3 172.4 (4)
C7—C1—C2—C3 177.9 (6) C9—S1—C8—C7 0.8 (6)
O—C2—C3—C4 −178.4 (6) C9—S1—C8—Br3 −172.3 (4)
C1—C2—C3—C4 −0.1 (10) Br4i—Br3—C8—C7 −87.8 (13)
O—C2—C3—Br1 1.3 (9) Br4i—Br3—C8—S1 84.7 (12)
C1—C2—C3—Br1 179.6 (5) C10—N—C9—S2 175.4 (6)
C2—C3—C4—C5 0.3 (11) C14—N—C9—S2 9.5 (10)
Br1—C3—C4—C5 −179.4 (5) C10—N—C9—S1 −2.5 (10)
C3—C4—C5—C6 −0.5 (11) C14—N—C9—S1 −168.4 (6)
C3—C4—C5—Br2 179.3 (5) C7—S2—C9—N −176.5 (6)
C4—C5—C6—C1 0.6 (11) C7—S2—C9—S1 1.5 (5)
Br2—C5—C6—C1 −179.2 (5) C8—S1—C9—N 176.6 (6)
C2—C1—C6—C5 −0.4 (10) C8—S1—C9—S2 −1.4 (5)
C7—C1—C6—C5 −178.1 (6) C9—N—C10—C11 138.2 (7)
C6—C1—C7—C8 −47.4 (10) C14—N—C10—C11 −55.1 (8)
C2—C1—C7—C8 134.8 (8) N—C10—C11—C12 57.3 (8)
C6—C1—C7—S2 132.8 (6) C10—C11—C12—C13 −57.8 (9)
C2—C1—C7—S2 −44.9 (8) C11—C12—C13—C14 54.4 (9)
C9—S2—C7—C8 −1.0 (6) C9—N—C14—C13 −142.7 (7)
C9—S2—C7—C1 178.8 (5) C10—N—C14—C13 50.6 (9)
C1—C7—C8—S1 −179.6 (6) C12—C13—C14—N −49.1 (8)

Symmetry code: (i) −x+1, y−1/2, −z+1/2.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O—H0···Br4 0.84 2.30 3.120 (5) 167
C6—H6···Oii 0.95 2.56 3.424 (8) 151
C10—H10A···S1 0.99 2.46 2.985 (7) 113
C13—H13A···Br2ii 0.99 2.88 3.836 (7) 163
C14—H14B···S2 0.99 2.51 3.026 (7) 112

Symmetry code: (ii) −x+1, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZS2264).

References

  1. Birsa, M. L. & Ganju, D. (2003). J. Phys. Org. Chem. 16, 207–212.
  2. Bryce, M. R. (2000). J. Mater. Chem. 10, 589–598.
  3. Dwiggins, C. W. (1975). Acta Cryst. A31, 146–148.
  4. Frasch, M., Mono, S., Pritzkow, H. & Sundermeyer, W. (1993). Chem. Ber. 126, 273–275.
  5. Narita, M. & Pittman, C. U. Jr (1976). Synthesis, pp. 489–514.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Stoe & Cie (2002). X-AREA Stoe & Cie, Darmstadt, Germany.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813016048/zs2264sup1.cif

e-69-o1097-sup1.cif (18.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813016048/zs2264Isup2.hkl

e-69-o1097-Isup2.hkl (215.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813016048/zs2264Isup3.cdx

Supplementary material file. DOI: 10.1107/S1600536813016048/zs2264Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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