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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 Jun 29;69(Pt 7):o1179. doi: 10.1107/S1600536813016462

1-(3,4-Di­fluoro­benz­yl)-4-(4-methyl­phenyl­sulfon­yl)piperazine

S Sreenivasa a,*, H C Anitha b, P A Suchetan b, B S Palakshamurthy c, J Savanur d, J Tonannavar d
PMCID: PMC3770435  PMID: 24046720

Abstract

In the title compound, C18H20F2N2O2S, the central piperazine ring adopts a chair conformation. The dihedral angle between the two benzene rings is 40.20°, whereas those between the piperazine ring (considering the best fit plane through all the non-H atoms) and the sulfonyl-bound benzene and di­fluoro­benzene rings are 74.96 and 86.16°, respectively. In the crystal, mol­ecules are stacked along the a axis through weak C—H⋯O and C—H⋯F inter­actions.

Related literature  

For similar structures, see: Sreenivasa et al. (2013a ,b ,c ).graphic file with name e-69-o1179-scheme1.jpg

Experimental  

Crystal data  

  • C18H20F2N2O2S

  • M r = 366.42

  • Monoclinic, Inline graphic

  • a = 6.6680 (2) Å

  • b = 36.0404 (8) Å

  • c = 7.6093 (2) Å

  • β = 99.728 (2)°

  • V = 1802.35 (8) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.21 mm−1

  • T = 298 K

  • 0.28 × 0.24 × 0.20 mm

Data collection  

  • Bruker APEXII diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.943, T max = 0.959

  • 9583 measured reflections

  • 2434 independent reflections

  • 1910 reflections with I > 2σ(I)

  • R int = 0.025

  • θmax = 22.8°

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.045

  • wR(F 2) = 0.114

  • S = 1.02

  • 2434 reflections

  • 227 parameters

  • H-atom parameters constrained

  • Δρmax = 0.19 e Å−3

  • Δρmin = −0.25 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: APEX2 and SAINT-Plus (Bruker, 2009); data reduction: SAINT-Plus and XPREP (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813016462/sj5330sup1.cif

e-69-o1179-sup1.cif (27.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813016462/sj5330Isup2.hkl

e-69-o1179-Isup2.hkl (119.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813016462/sj5330Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C3—H3⋯O1i 0.93 2.67 3.380 (4) 134
C7—H7A⋯O1ii 0.96 2.66 3.400 (4) 134
C10—H10B⋯F1iii 0.97 2.66 3.585 (3) 160

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

The authors thank Dr S. C. Sharma, Ex-Vice Chancellor, Tumkur University, for his constant encouragement. JT also thanks the DST, New Delhi, for the SCXRD facility under the PURSE Grant (SR/S9/Z-23/2008/11, 2009) at USIC, Karnatak University.

supplementary crystallographic information

Comment

As a part of our continued efforts to study the crystal structures of N-(aryl)(4-tosylpiperazin-1-yl)methanone derivatives (Sreenivasa et al., 2013a,b,c), we report herein the crystal structure of the title compound.

The title compound, Fig. 1, crystallizes in the monoclinic crystal system and P21/c space group. The piperazine ring in the title compound adopts a chair conformation. The dihedral angle between the two benzene rings is 40.20°, compared to the observed dihedral angles of 72.2 (12)°, 76.86° and 30.97 (2)° respectively in (I), 1-(2,4-dichlorobenzyl)-4-[(4-methyl-phenyl)sulfonyl]-piperazine (Sreenivasa et al., 2013a), (II) 1-tosyl-4-[2-(trifluoromethyl)-benzyl]piperazine (Sreenivasa et al., 2013b) and (III) (2,3-difluorophenyl)(4-tosylpiperazin-1-yl)methanone (Sreenivasa et al., 2013c). Further, the dihedral angles between the piperazine ring (considering the best fit plane through all the non-hydrogen atoms) and the sulfonyl bound benzene and difluorobenzene rings are 74.96° and 86.16° respectively, compared to 74.16 (2)° and 2.44 (13)° in I, 74.36° and 68.29 (3)° in II, and 69.4 (2)° and 75.98 (2)° in III.

In the crystal structure, the molecules are stacked along the a axis through weak C–H···O and C–H···F interactions, Fig. 2.

Experimental

A mixture of 1-tosylpiperazine (0.01 mmol), potassium carbonate (0.03 mmol) and 3,4-difluorobenzyl bromide (0.01 mmol) was added to dry acetonitrile (5 ml). The mixture was stirred at 85°C for 8 h. The reaction was monitored by TLC. Solvent was removed by vacuum distillation and the crude product obtained was purified by column chromatography using 230–400 silica gel and petroleum ether/ethyl acetate as eluent.

Colourless prisms were obtained from a mixture of dichloromethane/methanol (7:3) by slow evaporation.

Refinement

H atoms were positioned with idealized geometry using a riding model with C—H = 0.93 - 0.96 Å. The isotropic displacement parameters for all H atoms were set to 1.2 times Ueq of the parent atom or 1.5 times that of the parent atom for CH3.

Crystals were small and very weakly diffracting, with no significant data obtained beyond θ = 22.8° hence the low values of sin(θ/λ). However the structure solved and refined satisfactorily and gave acceptable residuals and su values.

Figures

Fig. 1.

Fig. 1.

Molecular structure of the title compound, showing the atom-labeling scheme. Displacement ellipsoids are drawn at the 50% probability level.

Fig. 2.

Fig. 2.

A packing diagram of the title compound, showing C–H···O and C–H···F interactions (dotted lines). Hydrogen atoms not involved in hydrogen bonding are omitted.

Crystal data

C18H20F2N2O2S prism
Mr = 366.42 Dx = 1.350 Mg m3
Monoclinic, P21/c Melting point: 501 K
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 6.6680 (2) Å Cell parameters from 227 reflections
b = 36.0404 (8) Å θ = 2.3–22.8°
c = 7.6093 (2) Å µ = 0.21 mm1
β = 99.728 (2)° T = 298 K
V = 1802.35 (8) Å3 Prism, colourless
Z = 4 0.28 × 0.24 × 0.20 mm
F(000) = 768

Data collection

Bruker APEXII diffractometer 2434 independent reflections
Radiation source: fine-focus sealed tube 1910 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.025
Detector resolution: 1.03 pixels mm-1 θmax = 22.8°, θmin = 2.3°
φ and ω scans h = −7→7
Absorption correction: multi-scan (SADABS; Bruker, 2009) k = −39→37
Tmin = 0.943, Tmax = 0.959 l = −7→8
9583 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.114 H-atom parameters constrained
S = 1.02 w = 1/[σ2(Fo2) + (0.0512P)2 + 0.6421P] where P = (Fo2 + 2Fc2)/3
2434 reflections (Δ/σ)max = 0.028
227 parameters Δρmax = 0.19 e Å3
0 restraints Δρmin = −0.25 e Å3
32 constraints

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 −0.3654 (5) 0.51803 (9) 0.7226 (4) 0.0763 (8)
C2 −0.4516 (5) 0.48860 (11) 0.7956 (4) 0.0850 (9)
H2 −0.5880 0.4901 0.8070 0.102*
C3 −0.3451 (5) 0.45692 (9) 0.8529 (4) 0.0761 (8)
H3 −0.4088 0.4376 0.9028 0.091*
C4 −0.1454 (4) 0.45409 (7) 0.8359 (3) 0.0598 (7)
C5 −0.0564 (4) 0.48283 (9) 0.7599 (4) 0.0821 (9)
H5 0.0790 0.4811 0.7455 0.099*
C6 −0.1666 (6) 0.51438 (9) 0.7045 (4) 0.0870 (9)
H6 −0.1034 0.5336 0.6535 0.104*
C7 −0.4821 (6) 0.55287 (10) 0.6662 (5) 0.1135 (13)
H7A −0.4283 0.5729 0.7431 0.170*
H7B −0.6229 0.5492 0.6742 0.170*
H7C −0.4697 0.5587 0.5455 0.170*
C8 −0.2454 (4) 0.36712 (8) 0.6955 (4) 0.0737 (8)
H8A −0.3419 0.3850 0.6347 0.088*
H8B −0.2926 0.3592 0.8033 0.088*
C9 −0.2310 (5) 0.33415 (7) 0.5761 (4) 0.0738 (8)
H9A −0.1406 0.3157 0.6400 0.089*
H9B −0.3644 0.3230 0.5431 0.089*
C10 0.0484 (4) 0.36109 (8) 0.4655 (4) 0.0734 (8)
H10A 0.1008 0.3680 0.3587 0.088*
H10B 0.1392 0.3427 0.5292 0.088*
C11 0.0404 (4) 0.39451 (7) 0.5809 (4) 0.0680 (7)
H11A 0.1762 0.4046 0.6154 0.082*
H11B −0.0443 0.4134 0.5148 0.082*
C12 −0.1536 (5) 0.31498 (8) 0.2910 (4) 0.0801 (9)
H12A −0.0854 0.2938 0.3529 0.096*
H12B −0.0773 0.3224 0.1990 0.096*
C13 −0.3660 (4) 0.30386 (8) 0.2051 (3) 0.0629 (7)
C14 −0.4280 (5) 0.26741 (8) 0.2015 (4) 0.0737 (8)
H14 −0.3405 0.2492 0.2572 0.088*
C15 −0.6186 (5) 0.25787 (8) 0.1158 (4) 0.0759 (8)
C16 −0.7479 (5) 0.28422 (10) 0.0346 (4) 0.0772 (8)
C17 −0.6903 (5) 0.32020 (9) 0.0356 (4) 0.0834 (9)
H17 −0.7788 0.3381 −0.0212 0.100*
C18 −0.4993 (5) 0.33006 (8) 0.1215 (4) 0.0729 (8)
H18 −0.4596 0.3548 0.1231 0.088*
N1 −0.0432 (3) 0.38434 (6) 0.7410 (3) 0.0646 (6)
N2 −0.1548 (3) 0.34542 (6) 0.4167 (3) 0.0627 (6)
O1 0.2056 (3) 0.42331 (6) 0.9324 (3) 0.0918 (7)
O2 −0.0916 (4) 0.39768 (6) 1.0463 (2) 0.0989 (7)
F1 −0.6798 (3) 0.22224 (5) 0.1108 (3) 0.1225 (8)
F2 −0.9357 (3) 0.27392 (6) −0.0489 (3) 0.1200 (7)
S1 −0.00612 (12) 0.41390 (2) 0.90583 (9) 0.0734 (3)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.080 (2) 0.089 (2) 0.0536 (17) 0.0093 (19) −0.0063 (15) −0.0117 (15)
C2 0.0544 (19) 0.114 (3) 0.086 (2) 0.001 (2) 0.0093 (16) −0.022 (2)
C3 0.074 (2) 0.087 (2) 0.0703 (19) −0.0205 (18) 0.0190 (15) −0.0075 (16)
C4 0.0567 (18) 0.0677 (18) 0.0527 (15) −0.0136 (13) 0.0024 (12) −0.0043 (13)
C5 0.0567 (18) 0.077 (2) 0.114 (3) −0.0079 (16) 0.0178 (17) 0.0131 (18)
C6 0.092 (3) 0.071 (2) 0.099 (2) −0.0020 (18) 0.0179 (19) 0.0170 (17)
C7 0.128 (3) 0.116 (3) 0.082 (2) 0.047 (2) −0.023 (2) −0.014 (2)
C8 0.082 (2) 0.079 (2) 0.0601 (17) −0.0242 (16) 0.0110 (15) 0.0036 (15)
C9 0.084 (2) 0.0610 (17) 0.0711 (19) −0.0216 (15) −0.0014 (15) 0.0047 (14)
C10 0.0626 (19) 0.076 (2) 0.0795 (19) −0.0024 (15) 0.0056 (14) 0.0011 (16)
C11 0.0652 (18) 0.0661 (18) 0.0705 (18) −0.0125 (14) 0.0051 (14) 0.0079 (14)
C12 0.073 (2) 0.077 (2) 0.086 (2) 0.0074 (16) 0.0020 (16) −0.0156 (17)
C13 0.0687 (19) 0.0607 (18) 0.0582 (16) 0.0072 (15) 0.0069 (13) −0.0111 (13)
C14 0.086 (2) 0.0618 (19) 0.0689 (18) 0.0114 (16) 0.0011 (16) −0.0066 (14)
C15 0.093 (2) 0.0558 (19) 0.080 (2) −0.0109 (18) 0.0167 (18) −0.0134 (15)
C16 0.066 (2) 0.087 (2) 0.075 (2) −0.0040 (18) −0.0003 (15) −0.0177 (17)
C17 0.082 (2) 0.079 (2) 0.083 (2) 0.0152 (18) −0.0043 (17) −0.0005 (17)
C18 0.078 (2) 0.0592 (18) 0.0782 (19) 0.0012 (15) 0.0042 (16) −0.0011 (15)
N1 0.0693 (15) 0.0594 (13) 0.0599 (13) −0.0137 (11) −0.0038 (11) 0.0045 (10)
N2 0.0631 (15) 0.0628 (14) 0.0602 (13) −0.0042 (11) 0.0047 (11) −0.0009 (11)
O1 0.0685 (14) 0.0894 (15) 0.1015 (16) −0.0033 (11) −0.0311 (11) −0.0102 (12)
O2 0.148 (2) 0.0899 (15) 0.0536 (12) −0.0194 (13) 0.0032 (12) 0.0131 (11)
F1 0.1360 (18) 0.0734 (13) 0.154 (2) −0.0270 (12) 0.0134 (14) −0.0162 (12)
F2 0.0804 (14) 0.1292 (17) 0.1398 (18) −0.0121 (11) −0.0119 (12) −0.0334 (13)
S1 0.0845 (6) 0.0688 (5) 0.0590 (5) −0.0099 (4) −0.0110 (4) 0.0051 (4)

Geometric parameters (Å, º)

C1—C6 1.362 (4) C10—H10A 0.9700
C1—C2 1.368 (4) C10—H10B 0.9700
C1—C7 1.501 (4) C11—N1 1.469 (3)
C2—C3 1.376 (4) C11—H11A 0.9700
C2—H2 0.9300 C11—H11B 0.9700
C3—C4 1.363 (4) C12—N2 1.457 (3)
C3—H3 0.9300 C12—C13 1.510 (4)
C4—C5 1.369 (4) C12—H12A 0.9700
C4—S1 1.754 (3) C12—H12B 0.9700
C5—C6 1.381 (4) C13—C14 1.376 (4)
C5—H5 0.9300 C13—C18 1.377 (4)
C6—H6 0.9300 C14—C15 1.371 (4)
C7—H7A 0.9600 C14—H14 0.9300
C7—H7B 0.9600 C15—F1 1.346 (3)
C7—H7C 0.9600 C15—C16 1.359 (4)
C8—N1 1.472 (3) C16—C17 1.352 (4)
C8—C9 1.508 (4) C16—F2 1.356 (3)
C8—H8A 0.9700 C17—C18 1.377 (4)
C8—H8B 0.9700 C17—H17 0.9300
C9—N2 1.450 (3) C18—H18 0.9300
C9—H9A 0.9700 N1—S1 1.632 (2)
C9—H9B 0.9700 O1—S1 1.432 (2)
C10—N2 1.457 (3) O2—S1 1.419 (2)
C10—C11 1.497 (4)
C6—C1—C2 116.7 (3) N1—C11—C10 110.0 (2)
C6—C1—C7 121.2 (3) N1—C11—H11A 109.7
C2—C1—C7 122.1 (3) C10—C11—H11A 109.7
C1—C2—C3 122.8 (3) N1—C11—H11B 109.7
C1—C2—H2 118.6 C10—C11—H11B 109.7
C3—C2—H2 118.6 H11A—C11—H11B 108.2
C4—C3—C2 119.5 (3) N2—C12—C13 112.0 (2)
C4—C3—H3 120.3 N2—C12—H12A 109.2
C2—C3—H3 120.3 C13—C12—H12A 109.2
C3—C4—C5 118.9 (3) N2—C12—H12B 109.2
C3—C4—S1 120.5 (2) C13—C12—H12B 109.2
C5—C4—S1 120.5 (2) H12A—C12—H12B 107.9
C4—C5—C6 120.4 (3) C14—C13—C18 118.5 (3)
C4—C5—H5 119.8 C14—C13—C12 121.2 (3)
C6—C5—H5 119.8 C18—C13—C12 120.2 (3)
C1—C6—C5 121.7 (3) C15—C14—C13 120.0 (3)
C1—C6—H6 119.2 C15—C14—H14 120.0
C5—C6—H6 119.2 C13—C14—H14 120.0
C1—C7—H7A 109.5 F1—C15—C16 119.2 (3)
C1—C7—H7B 109.5 F1—C15—C14 120.3 (3)
H7A—C7—H7B 109.5 C16—C15—C14 120.5 (3)
C1—C7—H7C 109.5 C17—C16—F2 120.3 (3)
H7A—C7—H7C 109.5 C17—C16—C15 120.6 (3)
H7B—C7—H7C 109.5 F2—C16—C15 119.1 (3)
N1—C8—C9 109.0 (2) C16—C17—C18 119.3 (3)
N1—C8—H8A 109.9 C16—C17—H17 120.3
C9—C8—H8A 109.9 C18—C17—H17 120.3
N1—C8—H8B 109.9 C17—C18—C13 121.0 (3)
C9—C8—H8B 109.9 C17—C18—H18 119.5
H8A—C8—H8B 108.3 C13—C18—H18 119.5
N2—C9—C8 110.5 (2) C11—N1—C8 111.8 (2)
N2—C9—H9A 109.6 C11—N1—S1 116.43 (17)
C8—C9—H9A 109.6 C8—N1—S1 118.03 (18)
N2—C9—H9B 109.6 C9—N2—C12 112.3 (2)
C8—C9—H9B 109.6 C9—N2—C10 109.7 (2)
H9A—C9—H9B 108.1 C12—N2—C10 110.5 (2)
N2—C10—C11 109.7 (2) O2—S1—O1 120.16 (13)
N2—C10—H10A 109.7 O2—S1—N1 106.38 (12)
C11—C10—H10A 109.7 O1—S1—N1 106.30 (13)
N2—C10—H10B 109.7 O2—S1—C4 108.02 (14)
C11—C10—H10B 109.7 O1—S1—C4 107.81 (12)
H10A—C10—H10B 108.2 N1—S1—C4 107.58 (11)
C6—C1—C2—C3 1.5 (5) C14—C13—C18—C17 −0.1 (4)
C7—C1—C2—C3 −178.0 (3) C12—C13—C18—C17 177.0 (3)
C1—C2—C3—C4 −0.6 (4) C10—C11—N1—C8 −56.5 (3)
C2—C3—C4—C5 −0.8 (4) C10—C11—N1—S1 163.77 (18)
C2—C3—C4—S1 −179.4 (2) C9—C8—N1—C11 55.7 (3)
C3—C4—C5—C6 1.2 (4) C9—C8—N1—S1 −165.23 (18)
S1—C4—C5—C6 179.8 (2) C8—C9—N2—C12 −175.5 (2)
C2—C1—C6—C5 −1.1 (5) C8—C9—N2—C10 61.1 (3)
C7—C1—C6—C5 178.4 (3) C13—C12—N2—C9 70.2 (3)
C4—C5—C6—C1 −0.2 (5) C13—C12—N2—C10 −166.9 (2)
N1—C8—C9—N2 −57.8 (3) C11—C10—N2—C9 −60.8 (3)
N2—C10—C11—N1 58.1 (3) C11—C10—N2—C12 174.7 (2)
N2—C12—C13—C14 −129.4 (3) C11—N1—S1—O2 −177.66 (19)
N2—C12—C13—C18 53.5 (4) C8—N1—S1—O2 45.1 (2)
C18—C13—C14—C15 0.0 (4) C11—N1—S1—O1 −48.5 (2)
C12—C13—C14—C15 −177.1 (3) C8—N1—S1—O1 174.31 (19)
C13—C14—C15—F1 179.6 (3) C11—N1—S1—C4 66.8 (2)
C13—C14—C15—C16 −0.3 (4) C8—N1—S1—C4 −70.4 (2)
F1—C15—C16—C17 −179.3 (3) C3—C4—S1—O2 −28.3 (3)
C14—C15—C16—C17 0.6 (5) C5—C4—S1—O2 153.0 (2)
F1—C15—C16—F2 0.2 (4) C3—C4—S1—O1 −159.6 (2)
C14—C15—C16—F2 −179.9 (3) C5—C4—S1—O1 21.8 (3)
F2—C16—C17—C18 179.8 (3) C3—C4—S1—N1 86.1 (2)
C15—C16—C17—C18 −0.7 (5) C5—C4—S1—N1 −92.5 (2)
C16—C17—C18—C13 0.4 (5)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C3—H3···O1i 0.93 2.67 3.380 (4) 134
C7—H7A···O1ii 0.96 2.66 3.400 (4) 134
C10—H10B···F1iii 0.97 2.66 3.585 (3) 160

Symmetry codes: (i) x−1, y, z; (ii) −x, −y+1, −z+2; (iii) x+1, −y+1/2, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SJ5330).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813016462/sj5330sup1.cif

e-69-o1179-sup1.cif (27.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813016462/sj5330Isup2.hkl

e-69-o1179-Isup2.hkl (119.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813016462/sj5330Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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