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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 Jun 29;69(Pt 7):o1187. doi: 10.1107/S1600536813017583

5-Fluoro-2-(4-fluoro­phen­yl)-7-methyl-3-phenyl­sulfinyl-1-benzo­furan

Pil Ja Seo a, Hong Dae Choi a, Uk Lee b,*
PMCID: PMC3770441  PMID: 24046726

Abstract

In the title compound, C21H14F2O2S, the dihedral angles between the mean plane [r.m.s. deviation = 0.007 (2) Å] of the benzo­furan ring system and the pendant 4-fluoro­phenyl and phenyl rings are 5.93 (9) and 80.23 (5)°, respectively. In the crystal, mol­ecules are linked by weak C—H⋯O and C—H⋯π inter­actions, forming a three-dimensional network.

Related literature  

For background information and the crystal structures of related compounds, see: Choi et al. (2011, 2012); Seo et al. (2011).graphic file with name e-69-o1187-scheme1.jpg

Experimental  

Crystal data  

  • C21H14F2O2S

  • M r = 368.38

  • Monoclinic, Inline graphic

  • a = 12.3698 (8) Å

  • b = 7.9967 (5) Å

  • c = 17.4195 (10) Å

  • β = 100.323 (4)°

  • V = 1695.20 (18) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.22 mm−1

  • T = 173 K

  • 0.30 × 0.26 × 0.10 mm

Data collection  

  • Bruker SMART APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.655, T max = 0.746

  • 30145 measured reflections

  • 4267 independent reflections

  • 3147 reflections with I > 2σ(I)

  • R int = 0.065

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.044

  • wR(F 2) = 0.123

  • S = 1.04

  • 4267 reflections

  • 236 parameters

  • H-atom parameters constrained

  • Δρmax = 0.34 e Å−3

  • Δρmin = −0.29 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 2012) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813017583/gg2118sup1.cif

e-69-o1187-sup1.cif (26.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813017583/gg2118Isup2.hkl

e-69-o1187-Isup2.hkl (209.1KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813017583/gg2118Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 is the centroid of the C16–C21 phenyl ring.

D—H⋯A D—H H⋯A DA D—H⋯A
C20—H20⋯O2i 0.95 2.35 3.252 (3) 158
C9—H9BCg1ii 0.98 2.79 3.519 (2) 132

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

This work was supported by a Dong-eui University grant (No. 2013AA076).

supplementary crystallographic information

Comment

As a part of our continuing study of 2-(4-fluorophenyl)-3-phenylsulfinyl-1-benzofuran derivatives containing chloro (Choi et al., 2011), bromo (Seo et al., 2011) and iodo (Choi et al., 2012) substituents in 5-position, we report herein the crystal structure of the title compound.

In the title molecule (Fig. 1), the benzofuran unit is essentially planar, with a mean deviation of 0.007 (2) Å from the least-squares plane defined by the nine constituent atoms. The dihedral angles between the mean plane of the benzofuran ring system and the pendant 4-fluorophenyl and phenyl rings are 5.93 (9) and 80.23 (5)°, respectively. In the crystal structure (Fig. 2), molecules are connected by weak C–H···O and C–H···π interactions (Table 1, Cg1 is the centroid of the C16-C21 phenyl ring), forming a three-dimensional network.

Experimental

3-Chloroperoxybenzoic acid (77%, 202 mg, 0.9 mmol) was added in small portions to a stirred solution of 5-fluoro-2-(4-fluorophenyl)-7-methyl-3-phenylsulfanyl-1-benzofuran (282 mg, 0.8 mmol) in dichloromethane (30 mL) at 273 K. After being stirred at room temperature for 5h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by column chromatography (benzene) to afford the title compound as a colorless solid [yield 54%, m.p. 466-467 K; Rf = 0.42 (benzene)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in benzene at room temperature.

Refinement

All H atoms were positioned geometrically and refined using a riding model, with C–H = 0.95 Å for aryl and 0.98Å for methyl H atoms. Uiso(H) = 1.2Ueq(C) for aryl and 1.5Ueq(C) for methyl H atoms. The positions of methyl hydrogens were optimized rotationally.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as small spheres of arbitrary radius.

Fig. 2.

Fig. 2.

A view of the C–H..O and C–H···π interactions (dotted lines) in the crystal structure of the title compound. H atoms non-participating in hydrogen-bonding were omitted for clarity. [Symmetry codes: (i) x, y - 1, z; (ii) x - 1/2, - y + 3/2, z - 1/2; (iii) x, y + 1, z; (iv) x + 1/2, - y + 3/2, z + 1/2.]

Crystal data

C21H14F2O2S F(000) = 760
Mr = 368.38 Dx = 1.443 Mg m3
Monoclinic, P21/n Melting point = 466–467 K
Hall symbol: -P 2yn Mo Kα radiation, λ = 0.71073 Å
a = 12.3698 (8) Å Cell parameters from 6581 reflections
b = 7.9967 (5) Å θ = 2.2–27.5°
c = 17.4195 (10) Å µ = 0.22 mm1
β = 100.323 (4)° T = 173 K
V = 1695.20 (18) Å3 Block, colourless
Z = 4 0.30 × 0.26 × 0.10 mm

Data collection

Bruker SMART APEXII CCD diffractometer 4267 independent reflections
Radiation source: rotating anode 3147 reflections with I > 2σ(I)
Graphite multilayer monochromator Rint = 0.065
Detector resolution: 10.0 pixels mm-1 θmax = 28.5°, θmin = 1.9°
φ and ω scans h = −16→16
Absorption correction: multi-scan (SADABS; Bruker, 2009) k = −10→10
Tmin = 0.655, Tmax = 0.746 l = −23→23
30145 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044 Hydrogen site location: difference Fourier map
wR(F2) = 0.123 H-atom parameters constrained
S = 1.04 w = 1/[σ2(Fo2) + (0.0545P)2 + 0.6509P] where P = (Fo2 + 2Fc2)/3
4267 reflections (Δ/σ)max = 0.001
236 parameters Δρmax = 0.34 e Å3
0 restraints Δρmin = −0.29 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.75286 (4) 0.76155 (6) 0.66805 (2) 0.02982 (13)
F1 0.88756 (12) 1.08879 (19) 0.40581 (8) 0.0604 (4)
F2 0.24627 (11) 0.3963 (2) 0.67822 (8) 0.0594 (4)
O1 0.52531 (10) 0.79604 (17) 0.47682 (6) 0.0331 (3)
O2 0.82873 (12) 0.90671 (18) 0.68234 (8) 0.0421 (4)
C1 0.66892 (15) 0.7947 (2) 0.57601 (9) 0.0293 (4)
C2 0.70298 (15) 0.8786 (2) 0.51067 (9) 0.0308 (4)
C3 0.79965 (17) 0.9521 (3) 0.49652 (11) 0.0368 (4)
H3 0.8643 0.9575 0.5352 0.044*
C4 0.79512 (19) 1.0161 (3) 0.42283 (12) 0.0420 (5)
C5 0.70310 (19) 1.0131 (3) 0.36455 (11) 0.0426 (5)
H5 0.7061 1.0612 0.3151 0.051*
C6 0.60661 (18) 0.9404 (3) 0.37787 (10) 0.0372 (5)
C7 0.61135 (16) 0.8754 (2) 0.45189 (10) 0.0317 (4)
C8 0.56166 (15) 0.7471 (2) 0.55269 (9) 0.0295 (4)
C9 0.50397 (19) 0.9291 (3) 0.31700 (11) 0.0468 (6)
H9A 0.4979 0.8165 0.2944 0.070*
H9B 0.5074 1.0114 0.2759 0.070*
H9C 0.4397 0.9519 0.3411 0.070*
C10 0.48089 (15) 0.6561 (2) 0.58759 (10) 0.0310 (4)
C11 0.49926 (16) 0.6069 (3) 0.66553 (11) 0.0388 (5)
H11 0.5674 0.6330 0.6980 0.047*
C12 0.42033 (17) 0.5211 (3) 0.69639 (12) 0.0433 (5)
H12 0.4332 0.4885 0.7497 0.052*
C13 0.32297 (17) 0.4839 (3) 0.64853 (12) 0.0412 (5)
C14 0.30143 (17) 0.5288 (3) 0.57126 (12) 0.0448 (5)
H14 0.2335 0.5001 0.5392 0.054*
C15 0.37990 (16) 0.6160 (3) 0.54113 (11) 0.0374 (5)
H15 0.3654 0.6496 0.4880 0.045*
C16 0.83023 (15) 0.5900 (2) 0.64087 (9) 0.0285 (4)
C17 0.92867 (16) 0.6178 (3) 0.61585 (11) 0.0404 (5)
H17 0.9549 0.7281 0.6105 0.049*
C18 0.9876 (2) 0.4805 (4) 0.59885 (13) 0.0560 (7)
H18 1.0550 0.4967 0.5809 0.067*
C19 0.9509 (2) 0.3218 (4) 0.60738 (13) 0.0593 (7)
H19 0.9931 0.2291 0.5957 0.071*
C20 0.8531 (2) 0.2952 (3) 0.63286 (12) 0.0502 (6)
H20 0.8274 0.1846 0.6382 0.060*
C21 0.79281 (17) 0.4303 (2) 0.65049 (10) 0.0346 (4)
H21 0.7260 0.4136 0.6691 0.041*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0319 (2) 0.0365 (3) 0.01842 (18) −0.0017 (2) −0.00255 (15) −0.00149 (16)
F1 0.0605 (9) 0.0742 (10) 0.0490 (7) −0.0177 (8) 0.0169 (7) 0.0140 (7)
F2 0.0472 (8) 0.0810 (11) 0.0534 (8) −0.0180 (7) 0.0181 (6) −0.0046 (7)
O1 0.0336 (7) 0.0419 (8) 0.0206 (5) 0.0028 (6) −0.0039 (5) 0.0011 (5)
O2 0.0475 (9) 0.0385 (8) 0.0342 (7) −0.0110 (7) −0.0085 (6) −0.0043 (6)
C1 0.0323 (9) 0.0332 (10) 0.0203 (7) 0.0009 (8) −0.0009 (7) 0.0005 (6)
C2 0.0355 (10) 0.0335 (10) 0.0220 (7) 0.0032 (8) 0.0010 (7) −0.0006 (7)
C3 0.0402 (11) 0.0401 (11) 0.0291 (8) −0.0035 (9) 0.0038 (8) 0.0001 (8)
C4 0.0492 (13) 0.0424 (12) 0.0364 (10) −0.0045 (10) 0.0131 (9) 0.0019 (9)
C5 0.0597 (14) 0.0422 (12) 0.0262 (8) 0.0027 (11) 0.0089 (9) 0.0048 (8)
C6 0.0512 (12) 0.0358 (11) 0.0226 (8) 0.0083 (9) 0.0009 (8) −0.0005 (7)
C7 0.0365 (10) 0.0335 (10) 0.0237 (8) 0.0025 (8) 0.0017 (7) −0.0010 (7)
C8 0.0319 (9) 0.0346 (10) 0.0195 (7) 0.0048 (8) −0.0020 (6) −0.0018 (7)
C9 0.0606 (15) 0.0510 (13) 0.0233 (8) 0.0095 (11) −0.0073 (9) 0.0016 (8)
C10 0.0282 (9) 0.0351 (10) 0.0282 (8) 0.0040 (8) 0.0010 (7) −0.0048 (7)
C11 0.0316 (10) 0.0525 (13) 0.0297 (9) −0.0033 (9) −0.0020 (7) 0.0011 (8)
C12 0.0386 (12) 0.0578 (14) 0.0330 (9) −0.0011 (10) 0.0050 (8) 0.0044 (9)
C13 0.0334 (11) 0.0481 (13) 0.0445 (11) −0.0044 (9) 0.0135 (9) −0.0064 (9)
C14 0.0311 (11) 0.0622 (15) 0.0398 (10) −0.0052 (10) 0.0031 (8) −0.0127 (10)
C15 0.0307 (10) 0.0519 (13) 0.0276 (8) 0.0014 (9) −0.0003 (7) −0.0071 (8)
C16 0.0269 (9) 0.0384 (10) 0.0177 (7) −0.0006 (8) −0.0030 (6) 0.0017 (7)
C17 0.0341 (11) 0.0562 (13) 0.0297 (9) −0.0007 (10) 0.0021 (8) 0.0097 (9)
C18 0.0421 (13) 0.091 (2) 0.0365 (11) 0.0184 (13) 0.0116 (9) 0.0080 (12)
C19 0.0697 (17) 0.0669 (18) 0.0392 (11) 0.0320 (15) 0.0044 (11) −0.0020 (11)
C20 0.0690 (16) 0.0418 (13) 0.0359 (10) 0.0090 (12) −0.0012 (10) −0.0012 (9)
C21 0.0385 (11) 0.0374 (11) 0.0253 (8) −0.0025 (9) −0.0010 (7) 0.0021 (7)

Geometric parameters (Å, º)

S1—O2 1.4855 (14) C10—C11 1.392 (2)
S1—C1 1.7671 (17) C10—C15 1.399 (3)
S1—C16 1.7846 (19) C11—C12 1.379 (3)
F1—C4 1.362 (2) C11—H11 0.9500
F2—C13 1.354 (2) C12—C13 1.369 (3)
O1—C8 1.3745 (19) C12—H12 0.9500
O1—C7 1.375 (2) C13—C14 1.372 (3)
C1—C8 1.370 (3) C14—C15 1.374 (3)
C1—C2 1.447 (2) C14—H14 0.9500
C2—C7 1.385 (2) C15—H15 0.9500
C2—C3 1.393 (3) C16—C21 1.378 (3)
C3—C4 1.374 (3) C16—C17 1.383 (3)
C3—H3 0.9500 C17—C18 1.379 (3)
C4—C5 1.383 (3) C17—H17 0.9500
C5—C6 1.384 (3) C18—C19 1.365 (4)
C5—H5 0.9500 C18—H18 0.9500
C6—C7 1.382 (2) C19—C20 1.378 (4)
C6—C9 1.504 (3) C19—H19 0.9500
C8—C10 1.454 (3) C20—C21 1.379 (3)
C9—H9A 0.9800 C20—H20 0.9500
C9—H9B 0.9800 C21—H21 0.9500
C9—H9C 0.9800
O2—S1—C1 106.59 (8) C11—C10—C8 122.99 (16)
O2—S1—C16 107.00 (9) C15—C10—C8 118.84 (16)
C1—S1—C16 97.50 (8) C12—C11—C10 121.16 (18)
C8—O1—C7 107.27 (14) C12—C11—H11 119.4
C8—C1—C2 107.38 (15) C10—C11—H11 119.4
C8—C1—S1 127.41 (14) C13—C12—C11 118.55 (19)
C2—C1—S1 125.21 (14) C13—C12—H12 120.7
C7—C2—C3 119.46 (16) C11—C12—H12 120.7
C7—C2—C1 104.94 (16) F2—C13—C12 118.68 (19)
C3—C2—C1 135.60 (17) F2—C13—C14 118.93 (19)
C4—C3—C2 115.45 (18) C12—C13—C14 122.4 (2)
C4—C3—H3 122.3 C13—C14—C15 118.77 (19)
C2—C3—H3 122.3 C13—C14—H14 120.6
F1—C4—C3 117.86 (19) C15—C14—H14 120.6
F1—C4—C5 117.40 (18) C14—C15—C10 120.96 (18)
C3—C4—C5 124.7 (2) C14—C15—H15 119.5
C4—C5—C6 120.34 (18) C10—C15—H15 119.5
C4—C5—H5 119.8 C21—C16—C17 121.41 (19)
C6—C5—H5 119.8 C21—C16—S1 118.17 (14)
C7—C6—C5 114.88 (18) C17—C16—S1 120.28 (16)
C7—C6—C9 121.7 (2) C18—C17—C16 118.0 (2)
C5—C6—C9 123.46 (17) C18—C17—H17 121.0
O1—C7—C6 124.24 (17) C16—C17—H17 121.0
O1—C7—C2 110.63 (15) C19—C18—C17 121.2 (2)
C6—C7—C2 125.12 (19) C19—C18—H18 119.4
C1—C8—O1 109.77 (15) C17—C18—H18 119.4
C1—C8—C10 135.78 (15) C18—C19—C20 120.5 (2)
O1—C8—C10 114.43 (15) C18—C19—H19 119.8
C6—C9—H9A 109.5 C20—C19—H19 119.8
C6—C9—H9B 109.5 C19—C20—C21 119.5 (2)
H9A—C9—H9B 109.5 C19—C20—H20 120.3
C6—C9—H9C 109.5 C21—C20—H20 120.3
H9A—C9—H9C 109.5 C16—C21—C20 119.5 (2)
H9B—C9—H9C 109.5 C16—C21—H21 120.3
C11—C10—C15 118.17 (18) C20—C21—H21 120.3
O2—S1—C1—C8 −147.60 (17) S1—C1—C8—C10 −1.9 (3)
C16—S1—C1—C8 102.09 (18) C7—O1—C8—C1 0.2 (2)
O2—S1—C1—C2 32.64 (19) C7—O1—C8—C10 −178.35 (15)
C16—S1—C1—C2 −77.66 (17) C1—C8—C10—C11 6.8 (4)
C8—C1—C2—C7 0.2 (2) O1—C8—C10—C11 −175.11 (18)
S1—C1—C2—C7 −179.97 (14) C1—C8—C10—C15 −173.3 (2)
C8—C1—C2—C3 −178.9 (2) O1—C8—C10—C15 4.8 (3)
S1—C1—C2—C3 0.9 (3) C15—C10—C11—C12 0.0 (3)
C7—C2—C3—C4 −0.3 (3) C8—C10—C11—C12 179.87 (19)
C1—C2—C3—C4 178.7 (2) C10—C11—C12—C13 0.4 (3)
C2—C3—C4—F1 −179.76 (18) C11—C12—C13—F2 178.5 (2)
C2—C3—C4—C5 0.6 (3) C11—C12—C13—C14 0.1 (4)
F1—C4—C5—C6 179.68 (19) F2—C13—C14—C15 −179.3 (2)
C3—C4—C5—C6 −0.7 (4) C12—C13—C14—C15 −0.8 (4)
C4—C5—C6—C7 0.4 (3) C13—C14—C15—C10 1.2 (3)
C4—C5—C6—C9 −178.7 (2) C11—C10—C15—C14 −0.7 (3)
C8—O1—C7—C6 179.07 (18) C8—C10—C15—C14 179.34 (19)
C8—O1—C7—C2 −0.1 (2) O2—S1—C16—C21 157.93 (13)
C5—C6—C7—O1 −179.11 (18) C1—S1—C16—C21 −92.11 (14)
C9—C6—C7—O1 0.0 (3) O2—S1—C16—C17 −17.86 (15)
C5—C6—C7—C2 −0.1 (3) C1—S1—C16—C17 92.11 (15)
C9—C6—C7—C2 179.01 (19) C21—C16—C17—C18 1.5 (3)
C3—C2—C7—O1 179.17 (17) S1—C16—C17—C18 177.18 (15)
C1—C2—C7—O1 −0.1 (2) C16—C17—C18—C19 −0.9 (3)
C3—C2—C7—C6 0.0 (3) C17—C18—C19—C20 0.4 (3)
C1—C2—C7—C6 −179.23 (18) C18—C19—C20—C21 −0.6 (3)
C2—C1—C8—O1 −0.3 (2) C17—C16—C21—C20 −1.8 (3)
S1—C1—C8—O1 179.93 (13) S1—C16—C21—C20 −177.49 (14)
C2—C1—C8—C10 177.8 (2) C19—C20—C21—C16 1.3 (3)

Hydrogen-bond geometry (Å, º)

Cg1 is the centroid of the C16-C21 phenyl ring.

D—H···A D—H H···A D···A D—H···A
C20—H20···O2i 0.95 2.35 3.252 (3) 158
C9—H9B···Cg1ii 0.98 2.79 3.519 (2) 132

Symmetry codes: (i) x, y−1, z; (ii) x−1/2, −y+3/2, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: GG2118).

References

  1. Brandenburg, K. (1998). DIAMOND Crystal Impact GbR, Bonn, Germany.
  2. Bruker (2009). APEX2, SADABS and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Choi, H. D., Seo, P. J. & Lee, U. (2012). Acta Cryst. E68, o1237. [DOI] [PMC free article] [PubMed]
  4. Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2011). Acta Cryst. E67, o498. [DOI] [PMC free article] [PubMed]
  5. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  6. Seo, P. J., Choi, H. D., Son, B. W. & Lee, U. (2011). Acta Cryst. E67, o2346. [DOI] [PMC free article] [PubMed]
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813017583/gg2118sup1.cif

e-69-o1187-sup1.cif (26.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813017583/gg2118Isup2.hkl

e-69-o1187-Isup2.hkl (209.1KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813017583/gg2118Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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