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. Author manuscript; available in PMC: 2014 Apr 1.
Published in final edited form as: Epigenomics. 2013 Apr;5(2):131–146. doi: 10.2217/epi.13.1
5′:agcacagacacacgggagacaatgggtaagaaagagagggggaaggagagcacatagcgaacccatctatcctttggatattgtgga
aaacaaacatttagaaagtgaagtcaatcccatcctgtattcaccatgatcgccctatacagaaatcacacaaagtctcttattgaggtaattatg
ggccactgccttagcgttccacagaaaatcttgtttggcctacccaggatttataggggaagtgaaatcattaaataactagttaacctctgttt
ggcaaaaagagtaagtaattactgaaaaggggagaaagaaaaaaa>>4aaaaaaaaaccctgcctttcacaaacagcacagatagcatc
ctgaagggatttacacaatacaccaacg85tttgttctgtacccagagttgttaaaataattgtgatgacaggtgtctaggtaccactttcttaat
ggttttcaatatccattgatttattattgtggctccccccacttacatctctagctctaagaaggggctaagaaaagagattttgcaccaaaggct
gattctttattcctgggctgaaaagaactaataaaaataatcactcg84gcttttaagcagaaagcttccatttacagtatttcacccttacccccc
ctccaagccccttgttatctaacataatggctagaatacatttccg83tctctccccttaataacttc>>3atg4<<cattaacatcctcttcacac
atgcgcgtgcgtgcgcg78cg77cg76cg75cg74cg73cg72cacacacacacacacacacacagaggcaaacgcgcgcgcacccagcaaa
aggcggaggtgggggggaaagaggcagcagaaatctcagctgtacttctagc3<<ccttttaaaaagtttgctctgtaaattggaatgag
gtcagatttggagcttctcattgcacgcggagattattattgcatcgggttccaagccaatgggaaggacgggggaggggcttggcacgag
gaagcgttagttacagcggctgattggctgtctgagaaaggataaagaagcgcgaggcggaattggggtctgctctaagctgcagccaga
gaaacagagtgaggggaagagggccgtctccctcccggtttccagttcttgcacgctgtttcttagagagtctgcagtgggggaactctgcc
ggtaaccagctccccttcttgcaggagggagggagaaacatacatttattcatgccggtctgttgcatgcaagcttcttggcttcctaccttgca
acaaaataattgcaccaactcctcagcgccgattccgcccacagagagtcccggagccagagtcgctttggctttgcactgcaggaaaggg
acttaggcgctagagacgatgtcgctttcctgagctaccgcgagctctcgtgaactgcaatcgactgcttcagggaaaggggtgggggaaa
gacttgccccggaggcggcgagaaacttgcgtttggaagatactccggctaccaacgtttggagaaactcctcgccgcggccgactccag
cctcggtgcccgcagggagcacttcagcggtgagggaggacggagggcctcggggactctaggttggcggcgggaggcggccgcccc
tggcccgcgcgccgctcaggggaccctggtctccgccccggggagcccgcagggcccggcgaccgcgccgcgagcgtgtgagcgcgc
gtgggcgcccggcaag:3′

Bold indicates CpG sites.

Bold and underline indicate CpG sites of amplicons 3 and 4 exhibiting differential methylation.

>>3: Start of amplicon 3; >>4: Start of amplicon 4; 3<<: End of amplicon 3; 4<<: End of amplicon 4.