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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 Sep 18;69(Pt 10):o1560. doi: 10.1107/S1600536813025087

5,6-Dimeth­yl-1,10-phenanthroline

Sergio S Rozenel a,*
PMCID: PMC3790421  PMID: 24098240

Abstract

In the title compound, C14H12N2, the N⋯N distance is 2.719 (1) Å. The N—C—C—N torsion angle [0.9 (1)°] is close to the ideal value of 0° as expected. Bond lengths and angles are consistent with those observed for [1,10]phenanthroline and coordinated 5,6 dimeth­yl[1,10]phenanthroline. In the crystal, C—H⋯N hydrogen bonds link the mol­ecules into C(4) chains running parallel to the b axis. Weak π–π inter­actions between benzene and pyridine rings [centroid–centroid distance = 3.5337 (7) Å] and between benzene rings [centroid–centroid distances = 3.6627 (7) and 3.8391 (7)Å] also occur.

Related literature  

For [1,10]phenanthroline and 5,6-dimeth­yl[1,10]phenan­thro­line, see: Ton & Bolte (2005) and Gasque et al. (1999), respectively. For hydrogen-bond motifs, see: Bernstein et al. (1995).graphic file with name e-69-o1560-scheme1.jpg

Experimental  

Crystal data  

  • C14H12N2

  • M r = 208.26

  • Monoclinic, Inline graphic

  • a = 7.1932 (7) Å

  • b = 10.0572 (10) Å

  • c = 13.8729 (13) Å

  • β = 93.673 (5)°

  • V = 1001.55 (17) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 100 K

  • 0.11 × 0.10 × 0.09 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.991, T max = 0.993

  • 16500 measured reflections

  • 1855 independent reflections

  • 1613 reflections with I > 2σ(I)

  • R int = 0.022

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.035

  • wR(F 2) = 0.100

  • S = 1.06

  • 1855 reflections

  • 171 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.16 e Å−3

  • Δρmin = −0.20 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare, et al. 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-32 (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).

Supplementary Material

Crystal structure: contains datablock(s) srd3013, I. DOI: 10.1107/S1600536813025087/bx2451sup1.cif

e-69-o1560-sup1.cif (19.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813025087/bx2451Isup2.hkl

e-69-o1560-Isup2.hkl (91.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813025087/bx2451Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C2—H2⋯N1i 0.945 (14) 2.439 (13) 3.3718 (15) 169.0 (10)

Symmetry code: (i) Inline graphic.

Acknowledgments

The author thanks Professor Richard Andersen and Dr DiPasquale for their support. This work was supported by the Director, Office of Science, Office of Basic Energy Sciences, and the Division of Chemical Sciences, Geosciences, and Biosciences of the US Department of Energy under contract No. DE–AC02-05CH11231.

supplementary crystallographic information

1. Comment

5,6-dimethyl-1,10-phenanthroline was obtained from Sigma-Aldrich. The distances and angles are consistent with those observed for [1,10]phenanthroline (Ton & Bolte, 2005) and coordinated 5,6-dimethyl-1,10-phenanthroline (Gasque, et al., 1999). The crystal packing is stabilized by an intermolecular C—H···N hydrogen bond interaction which links the molecules into chains with graph-set notation C(4) (Bernstein, et al., 1995) running parallel to the b axis. Weak intermolecular π-π interactions, involving the benzene rings, and the pyridine rings, respectively with an average plane-to plane separation of 3.5982 (7) Å further stabilize and reinforce the crystal structure.

2. Experimental

Crystals of the title compound, 5,6-dimethyl-1,10-phenanthroline, were obtained by sublimation at 160 °C under dynamic vacuum.

3. Refinement

All non-hydrogen atoms were refined anisotropically. Aromatic hydrogen atoms were located in the Fourier map and refined isotropically. Methyl hydrogen atoms were placed based on the expected geometry of the carbon atoms to which they were attached and refined using a riding model, with C—H distances 0.98 Å and Uiso(H) = 1.5 Ueq(C).

Figures

Fig. 1.

Fig. 1.

Top view of the structure of 5,6-dimethyl-1,10-phenanthroline, displacement ellipsoids drawn at the 50% probability level.

Crystal data

C14H12N2 F(000) = 440
Mr = 208.26 SHELXL-97
Monoclinic, P21/c Dx = 1.381 Mg m3
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 7.1932 (7) Å Cell parameters from 9819 reflections
b = 10.0572 (10) Å θ = 2.5–25.4°
c = 13.8729 (13) Å µ = 0.08 mm1
β = 93.673 (5)° T = 100 K
V = 1001.55 (17) Å3 Block, colourless
Z = 4 0.11 × 0.10 × 0.09 mm

Data collection

Bruker APEXII CCD diffractometer 1855 independent reflections
Radiation source: microfocus sealed tube 1613 reflections with I > 2σ(I)
QUAZAR multilayer mirrors monochromator Rint = 0.022
Detector resolution: 8.366 pixels mm-1 θmax = 25.5°, θmin = 2.5°
φ and ω scans h = −8→8
Absorption correction: multi-scan (SADABS; Bruker, 2009) k = −12→12
Tmin = 0.991, Tmax = 0.993 l = −16→16
16500 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.100 H atoms treated by a mixture of independent and constrained refinement
S = 1.06 w = 1/[σ2(Fo2) + (0.0576P)2 + 0.2458P] where P = (Fo2 + 2Fc2)/3
1855 reflections (Δ/σ)max < 0.001
171 parameters Δρmax = 0.16 e Å3
0 restraints Δρmin = −0.20 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.42701 (15) 0.02490 (12) 0.23673 (8) 0.0163 (3)
C2 0.42141 (15) 0.15376 (12) 0.19967 (8) 0.0169 (3)
C3 0.35250 (15) 0.17126 (12) 0.10622 (8) 0.0155 (3)
C4 0.29281 (14) 0.06112 (11) 0.04921 (8) 0.0133 (3)
C5 0.22138 (14) 0.07469 (11) −0.05047 (8) 0.0140 (3)
C6 0.17602 (14) −0.03576 (11) −0.10406 (8) 0.0140 (3)
C7 0.19526 (14) −0.16667 (11) −0.06034 (8) 0.0136 (3)
C8 0.15222 (15) −0.28403 (12) −0.11278 (8) 0.0168 (3)
C9 0.17425 (16) −0.40516 (12) −0.06876 (8) 0.0192 (3)
C10 0.24086 (16) −0.40937 (12) 0.02795 (9) 0.0193 (3)
C11 0.26123 (14) −0.18229 (11) 0.03706 (8) 0.0132 (3)
C12 0.31061 (14) −0.06488 (11) 0.09349 (8) 0.0128 (3)
C13 0.20306 (16) 0.21432 (12) −0.08965 (8) 0.0182 (3)
H13A 0.3273 0.2519 −0.0961 0.027*
H13B 0.1353 0.2692 −0.0452 0.027*
H13C 0.1347 0.2125 −0.1530 0.027*
C14 0.10570 (15) −0.03036 (12) −0.20896 (8) 0.0188 (3)
H14A −0.0264 −0.0549 −0.2148 0.028*
H14B 0.1771 −0.0926 −0.2464 0.028*
H14C 0.1207 0.0600 −0.2337 0.028*
N1 0.37466 (12) −0.08243 (9) 0.18696 (7) 0.0150 (2)
N2 0.28440 (13) −0.30292 (9) 0.08056 (7) 0.0163 (3)
H1 0.4752 (17) 0.0073 (13) 0.3036 (9) 0.019 (3)*
H2 0.4698 (17) 0.2240 (14) 0.2390 (9) 0.020 (3)*
H3 0.3500 (18) 0.2604 (15) 0.0801 (9) 0.023 (3)*
H8 0.1103 (18) −0.2799 (14) −0.1809 (10) 0.026 (3)*
H9 0.1465 (17) −0.4866 (14) −0.1012 (9) 0.022 (3)*
H10 0.2560 (18) −0.4966 (14) 0.0606 (9) 0.024 (3)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0132 (5) 0.0220 (7) 0.0137 (6) −0.0005 (4) 0.0003 (4) −0.0018 (5)
C2 0.0141 (6) 0.0184 (6) 0.0183 (6) −0.0024 (4) 0.0026 (4) −0.0061 (5)
C3 0.0146 (6) 0.0130 (6) 0.0194 (6) 0.0002 (4) 0.0043 (4) 0.0005 (5)
C4 0.0086 (5) 0.0157 (6) 0.0160 (6) 0.0004 (4) 0.0031 (4) 0.0004 (5)
C5 0.0095 (5) 0.0160 (6) 0.0167 (6) 0.0014 (4) 0.0030 (4) 0.0034 (5)
C6 0.0098 (5) 0.0184 (6) 0.0141 (6) 0.0011 (4) 0.0023 (4) 0.0007 (5)
C7 0.0093 (5) 0.0169 (6) 0.0149 (6) 0.0007 (4) 0.0020 (4) −0.0005 (5)
C8 0.0154 (6) 0.0210 (7) 0.0142 (6) −0.0015 (5) 0.0008 (4) −0.0024 (5)
C9 0.0201 (6) 0.0157 (6) 0.0217 (6) −0.0018 (5) 0.0014 (5) −0.0045 (5)
C10 0.0209 (6) 0.0126 (6) 0.0241 (7) 0.0004 (5) 0.0001 (5) 0.0012 (5)
C11 0.0101 (5) 0.0145 (6) 0.0151 (6) 0.0005 (4) 0.0026 (4) 0.0012 (5)
C12 0.0091 (5) 0.0165 (6) 0.0130 (6) 0.0004 (4) 0.0019 (4) 0.0013 (4)
C13 0.0197 (6) 0.0169 (7) 0.0177 (6) 0.0004 (5) 0.0000 (5) 0.0029 (5)
C14 0.0192 (6) 0.0218 (7) 0.0150 (6) 0.0019 (5) −0.0014 (4) 0.0023 (5)
N1 0.0138 (5) 0.0180 (5) 0.0131 (5) 0.0002 (4) −0.0002 (4) 0.0002 (4)
N2 0.0172 (5) 0.0135 (5) 0.0178 (5) −0.0001 (4) −0.0003 (4) 0.0013 (4)

Geometric parameters (Å, º)

C1—N1 1.3230 (15) C8—C9 1.3673 (17)
C1—C2 1.3939 (17) C8—H8 0.975 (14)
C1—H1 0.985 (13) C9—C10 1.3960 (17)
C2—C3 1.3695 (16) C9—H9 0.950 (14)
C2—H2 0.945 (14) C10—N2 1.3220 (15)
C3—C4 1.4118 (16) C10—H10 0.990 (14)
C3—H3 0.967 (15) C11—N2 1.3605 (14)
C4—C12 1.4105 (16) C11—C12 1.4483 (15)
C4—C5 1.4505 (16) C12—N1 1.3595 (14)
C5—C6 1.3645 (16) C13—H13A 0.9800
C5—C13 1.5085 (15) C13—H13B 0.9800
C6—C7 1.4525 (16) C13—H13C 0.9800
C6—C14 1.5108 (15) C14—H14A 0.9800
C7—C8 1.4104 (15) C14—H14B 0.9800
C7—C11 1.4118 (15) C14—H14C 0.9800
N1—C1—C2 124.44 (10) C8—C9—H9 122.8 (8)
N1—C1—H1 114.6 (8) C10—C9—H9 118.6 (8)
C2—C1—H1 121.0 (7) N2—C10—C9 124.10 (11)
C3—C2—C1 117.96 (10) N2—C10—H10 116.7 (8)
C3—C2—H2 123.3 (8) C9—C10—H10 119.2 (8)
C1—C2—H2 118.7 (8) N2—C11—C7 123.22 (10)
C2—C3—C4 120.54 (11) N2—C11—C12 117.93 (10)
C2—C3—H3 118.1 (8) C7—C11—C12 118.84 (10)
C4—C3—H3 121.3 (8) N1—C12—C4 123.21 (10)
C12—C4—C3 116.43 (10) N1—C12—C11 117.78 (10)
C12—C4—C5 121.10 (10) C4—C12—C11 119.00 (10)
C3—C4—C5 122.46 (10) C5—C13—H13A 109.5
C6—C5—C4 120.03 (10) C5—C13—H13B 109.5
C6—C5—C13 123.31 (10) H13A—C13—H13B 109.5
C4—C5—C13 116.65 (10) C5—C13—H13C 109.5
C5—C6—C7 119.83 (10) H13A—C13—H13C 109.5
C5—C6—C14 123.31 (10) H13B—C13—H13C 109.5
C7—C6—C14 116.87 (10) C6—C14—H14A 109.5
C8—C7—C11 116.73 (10) C6—C14—H14B 109.5
C8—C7—C6 122.09 (10) H14A—C14—H14B 109.5
C11—C7—C6 121.17 (10) C6—C14—H14C 109.5
C9—C8—C7 119.99 (10) H14A—C14—H14C 109.5
C9—C8—H8 119.4 (8) H14B—C14—H14C 109.5
C7—C8—H8 120.6 (8) C1—N1—C12 117.36 (9)
C8—C9—C10 118.62 (11) C10—N2—C11 117.34 (10)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C2—H2···N1i 0.945 (14) 2.439 (13) 3.3718 (15) 169.0 (10)

Symmetry code: (i) −x+1, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BX2451).

References

  1. Altomare, A., Burla, M. C., Camalli, M., Cascarano, G. L., Giacovazzo, C., Guagliardi, A., Moliterni, A. G. G., Polidori, G. & Spagna, R. (1999). J. Appl. Cryst. 32, 115–119.
  2. Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573.
  3. Bruker (2009). APEX2, SAINT and SADABS Bruker AXS Inc. Madison, Wisconsin, USA.
  4. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  5. Gasque, L., Moreno-Esparza, R., Mollins, E., Briansó-Penalva, J. L., Ruiz-Ramírez, L. & Medina-Dickinson, G. (1999). Acta Cryst. C55, 158–160.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Ton, Q. C. & Bolte, M. (2005). Acta Cryst. E61, o1406–o1407.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) srd3013, I. DOI: 10.1107/S1600536813025087/bx2451sup1.cif

e-69-o1560-sup1.cif (19.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813025087/bx2451Isup2.hkl

e-69-o1560-Isup2.hkl (91.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813025087/bx2451Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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