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Antimicrobial Agents and Chemotherapy logoLink to Antimicrobial Agents and Chemotherapy
. 2013 Nov;57(11):5548–5558. doi: 10.1128/AAC.01288-13

Antibacterial Activity of Eravacycline (TP-434), a Novel Fluorocycline, against Hospital and Community Pathogens

J A Sutcliffe 1,, W O'Brien 1, C Fyfe 1, T H Grossman 1
PMCID: PMC3811277  PMID: 23979750

Abstract

Eravacycline (TP-434 or 7-fluoro-9-pyrrolidinoacetamido-6-demethyl-6-deoxytetracycline) is a novel fluorocycline that was evaluated for antimicrobial activity against panels of recently isolated aerobic and anaerobic Gram-negative and Gram-positive bacteria. Eravacycline showed potent broad-spectrum activity against 90% of the isolates (MIC90) in each panel at concentrations ranging from ≤0.008 to 2 μg/ml for all species panels except those of Pseudomonas aeruginosa and Burkholderia cenocepacia (MIC90 values of 32 μg/ml for both organisms). The antibacterial activity of eravacycline was minimally affected by expression of tetracycline-specific efflux and ribosomal protection mechanisms in clinical isolates. Furthermore, eravacycline was active against multidrug-resistant bacteria, including those expressing extended-spectrum β-lactamases and mechanisms conferring resistance to other classes of antibiotics, including carbapenem resistance. Eravacycline has the potential to be a promising new intravenous (i.v.)/oral antibiotic for the empirical treatment of complicated hospital/health care infections and moderate-to-severe community-acquired infections.

INTRODUCTION

Multidrug-resistant bacteria pose a significant threat to public health. Antimicrobial resistance and its global spread threaten the continued effectiveness of many medicines used today, while at the same time, they jeopardize important medical procedures that require antimicrobial therapy to be successful (1). For example, the crude mortality rate was higher for adult patients with carbapenem-resistant Klebsiella pneumoniae infections than for those with carbapenem-susceptible K. pneumoniae infections (50.0% versus 25.7%) (2). Because carbapenem-resistant Enterobacteriaceae (CRE) are also resistant to most antibiotics, including cephalosporins, fluoroquinolones, and most aminoglycosides, few therapeutic options exist for the treatment of invasive infections caused by these pathogens (35). Of the 37 CRE that have been reported in the United States, the last 15 have been reported since July 2012 (6). In the United States, methicillin-resistant Staphylococcus aureus (MRSA) alone annually infects more than 94,000 people and kills nearly 19,000—more deaths than from homicides, HIV/AIDS, Parkinson's disease, or emphysema (5, 7). Additionally, resistant bacteria create an immense economic burden. The medical costs attributable to antimicrobial resistance ranged from $18,588 to $29,069 per patient in one sensitivity analysis of high-risk patients, with an excess duration of hospital stay of 6.4 to 12.7 days and with higher attributable mortality rates (8). Several studies have suggested that annual costs of antibiotic-resistant infections are a staggering $21 billion to $34 billion in the United States alone (9).

The need for new antibiotics to treat the increasing number of multidrug-resistant bacteria was recognized most recently in April 2011 by the World Health Organization's call for a six-point global policy package that includes joint planning, surveillance, drug regulation, rational use of medicines, infection prevention and control, and innovation and research (10). In some countries, there is little difference in the incidences of multidrug-resistant pathogens in the community and in the hospital; most notably, extended-spectrum β-lactamase (ESBL)-producing and/or carbapenem-resistant Enterobacteriaceae are being isolated in patients with no prior contact with the health care system, resulting in increased hospital stays for otherwise healthy adults with urinary tract infection or pyelonephritis (3, 11). In the United States, carbapenem-resistant health care-associated K. pneumoniae urinary tract infections are endemic in certain New York hospitals and carbapenem-resistant K. pneumoniae have spread to at least 33 U.S. states and have been described in many other countries (12, 13).

Eravacycline is a novel fluorocycline antibiotic designed to overcome resistance to common tetracycline-specific efflux and ribosomal protection mechanisms and is impervious to other antibiotic-specific resistance mechanisms (1417). Similar to other members of the tetracycline antibiotic class, eravacycline has been shown to be a potent, mechanism-based inhibitor of the bacterial ribosome (16). It has modifications at both the C-7 (fluorine) and C-9 [2-(pyrrolidin-1-yl)ethanamido] positions on the tetracyclic core that were made possible by using a totally synthetic route (Fig. 1) (15, 18, 19). In this work, we show that eravacycline has broad-spectrum antimicrobial activity, with MIC90 values of ≤2 μg/ml against panels of all major bacterial species except for Pseudomonas aeruginosa and Burkholderia cenocepacia.

Fig 1.

Fig 1

Chemical structure of eravacycline (TP-434).

MATERIALS AND METHODS

Bacterial strains.

Recently isolated, demographically diverse clinical isolates were obtained from or evaluated at Micromyx, LLC (Kalamazoo, MI); Eurofins Medinet (Chantilly, VA); International Health Management Associates, Inc. (IHMA; Schaumburg, IL); and Hershey Medical Center (Hershey, PA) and included over 200 baseline isolates from a phase 2 trial for treatment of complicated intra-abdominal infections conducted by Tetraphase Pharmaceuticals (20). Species-appropriate quality control (QC) strains were used to ensure laboratory standards, as guided by Clinical and Laboratory Standards Institute (CLSI) guidelines (2123). The QC strains were obtained from the American Type Culture Collection (Manassas, VA). Staphylococcus aureus strains SA981 (original strain name, K28) and SA982 (original strain name, K40) are an isogenic pair, with SA982 overexpressing the NorA pump (24). S. aureus strain SA983 (original strain name, K181) is the parent of SA984 (original strain name, K2068), a strain that overexpresses mepA (25).

Genotypic detection of β-lactamases.

Detection of ESBL genes by PCR was done at the IHMA or by standard singleplex PCR methodology at Tetraphase Pharmaceuticals, using previously reported consensus primers for family or multiple-related families of genes, including blaOXA-1-like, blaSHV, blaCTX-M-1-3-15, blaCTX-M-2, blaCTX-M-9-14, blaCTX-M-8-25-26-39-41, and blaKPC (26). Plasmid-mediated ampC family-specific genes were distinguished by using primers described previously by Perez-Perez and Hanson (27) that targeted MOX-1, MOX-2, CMY-1, CMY-8 to CMY-11, LAT-1 to LAT-4, CMY-2 to CMY-7, BIL-1, DHA-1, DHA-2, ACC, MIR-1T, ACT-1, and FOX-1 to FOX-5b. Primers designed in-house were derived from reported GenBank sequences for blaNDM, blaTEM, blaSPM, blaGIM, blaIMP, blaVIM, blaSIM, blaKHM, blaAIM-1, blaPER, blaVEB, and blaADC. All in-house samples providing a PCR product were sequenced (Genewiz, South Plainfield, NJ) to confirm ESBL gene identity compared to reported GenBank sequences.

Source of antibiotics.

Commercial-grade antibiotics were obtained from the USP (Rockville, MD), ChemPacific Corp. (Baltimore, MD), or Sigma-Aldrich, (St. Louis, MO). Eravacycline was synthesized as described previously by Xiao et al. (15).

Antibiotic susceptibility.

MIC values were determined by using microtiter microdilution broth or agar dilution for aerobic and anaerobic organisms, respectively, according to CLSI standardized methodology (2123). Antibiotic resistance or insensitivity was determined according to current CLSI guidelines (22).

RESULTS

Activity of eravacycline and comparators against Gram-negative pathogens.

The in vitro activity of eravacycline was evaluated against 2,644 Gram-negative aerobic isolates (Table 1). The collection of organisms contained clinically important species, and many of the isolates were resistant to one or more of the comparator compounds examined. In the vast majority of instances, the MIC90 value for eravacycline was equivalent to or lower than that of comparators for each organism/phenotypic grouping.

Table 1.

Susceptibilities of Gram-negative aerobic bacteria to eravacycline and comparatorsa

Organism MIC50/90 (μg/ml), MIC range (μg/ml), and no. of isolates
ERV TET TGC CARB AG 3rd GC FQ CST PTZ
Acinetobacter baumannii 0.25/1 8/>32 0.5/4 2/32 8/>32 >16/>32 >2/>2 0.5/2 >64/>128
0.016–8 ≤0.25–>32 ≤0.016–8 0.13–>32 ≤0.25–>32 0.13–>64 0.016–>32 0.13–>4 ≤0.5–>128
188 159 188 188 188 128 188 155 128
Acinetobacter baumannii CARB-I/R,b FQ-R,d AG-R 0.5/2 >8/>32 2/8 >8/>32 >8/>32 >32/>32 >4/16 0.5/1 >64/>128
≤0.016–4 2–>32 0.13–8 >8–>32 >8–>32 >16–>32 >2–>32 0.13–>4 64–>128
52 43 52 52 52 37 52 43 44
Acinetobacter baumannii TET-R 0.5/2 >8/>32 2/4 >8/>32 >8/>32 >32/>32 >4/32 0.5/1 >64/>128
0.06–2 >8–>32 0.25–8 ≤0.25–>32 ≤0.25–>32 4–>64 ≤0.25–>32 0.13–>4 4–>128
69 69 69 69 69 39 69 68 56
Acinetobacter lwoffii 0.13/0.25 1/2 0.13/0.5 ≤1/4 ≤0.25/1 1/16 ≤0.25/≤0.25 0.25/>2 ≤0.5/8
0.03–0.25 ≤0.25–>8 0.06–0.5 ≤0.25–>8 ≤0.25–>8 ≤0.5–>64 ≤0.25–2 ≤0.13–4 ≤0.5–16
34 34 34 34 34 34 34 34 34
Burkholderia cenocepacia 8/32 >32/>32 8/32 32/>32 >32/>32 16/32 4/8 >32/>32 16/>128
0.13–32 16–>32 0.25–>32 1–>32 >32–>32 2–>32 0.5–>32 >32–>32 0.5–>128
10 10 10 10 10 10 10 10 10
Citrobacter freundii 0.25/1 1/>8 0.5/2 0.5/2 0.5/>8 1/32 <0.25/>2 0.5/1 4/>128
0.06–2 0.5–>8 0.13–8 0.004–>32 ≤0.25–>32 0.06–>64 0.008–>4 0.25–>2 0.25–>128
115 65 115 103 115 115 115 64 115
Citrobacter freundii 3rd-GC-I/Rc 0.5/1 2/8 1/2 1/16 0.5/>32 >16/>64 1/>4 0.25/1 >64/>128
0.13–2 1–>8 0.25–8 0.25–>32 ≤0.25–>32 4–>64 0.016–>4 0.25–>2 2–>128
42 16 42 39 42 42 42 16 42
Enterobacter cloacae 0.5/2 2/>8 0.5/2 0.5/2 0.5/8 2/>64 ≤0.25/>4 0.5/>4 4/>64
0.03–4 0.5–>32 0.06–8 0.03–>32 ≤0.25–>32 0.03–>64 0.008–>32 ≤0.13–>32 0.5–>128
270 218 270 270 270 246 270 178 220
Enterobacter cloacae 3rd-GC-I/R 0.5/2 4/>8 1/4 0.5/4 0.5/16 >32/>64 0.25/>4 0.25/>2 >64/>128
0.03–4 1–>32 0.06–8 0.03–>32 ≤0.25–>32 2–>64 0.008–>32 ≤0.13–>32 2–>128
122 93 122 122 122 122 122 81 107
Enterobacter cloacae CARB-I/R 0.5/2 4/>32 0.5/4 2/16 1/>32 >32/>64 ≤0.25/>4 0.25/>4 >64/>128
0.25–4 2–>32 0.13–4 ≤0.016–>32 ≤0.25–>32 0.13–>64 0.03–>32 ≤0.13–>32 1–>128
34 31 34 34 34 26 34 21 21
Enterobacter cloacae FQ-R 2/4 8/>32 2/4 0.5/8 1/>32 >32/>64 >4/32 0.25/1 >64/>128
0.25–4 2–>32 0.25–8 ≤0.016–>32 ≤0.25–>32 0.5–>64 >2–>32 ≤0.13–>4 2–>128
36 29 36 36 36 35 36 21 27
Enterobacter cloacae AG-R 0.5/2 8/>32 1/4 0.5/16 16/>32 >32/>64 >2/>4 0.25/1 >64/>128
0.25–4 1–>32 0.25–8 0.13–>32 >8–>32 0.25–>64 ≤0.016–>32 ≤0.13–1 2–>128
26 20 26 26 26 26 26 15 22
Enterobacter cloacae TET-R 2/4 >8/>32 1/4 0.25/2 1/>32 32/>64 4/16 0.25/>4 16/>64
0.25–4 >8–>32 0.25–8 0.03–>32 ≤0.25–>32 0.13–>64 0.03–>32 ≤0.13–>32 2–>128
25 25 25 25 25 25 25 21 16
Enterobacter aerogenes 0.25/1 2/8 0.5/2 ≤1/1 ≤0.25/0.5 ≤0.5/>32 ≤0.25/≤0.25 0.25/0.5 4/>64
0.13–2 0.5–>8 0.25–4 ≤0.25–8 ≤0.25–8 ≤0.5–>64 ≤0.25–>4 ≤0.13–>4 ≤0.5–>64
77 77 77 77 77 77 77 77 77
Enterobacter aerogenes 3rd-GC-I/R 0.25/1 2/8 0.5/2 0.5/1 ≤0.25/1 32/>32 ≤0.25/>4 0.25/1 64/>64
0.13–2 1–>8 0.25–4 ≤0.25–8 ≤0.25–2 4–>64 ≤0.25–>4 ≤0.13–1 8–>64
27 27 27 27 27 27 27 27 27
Escherichia coli 0.25/0.5 4/>32 0.25/0.5 0.25/0.5 1/>8 ≤0.5/>32 ≤0.25/>4 0.5/0.5 2/>64
≤0.016–4 0.25–>64 0.06–>8 ≤0.002–>32 ≤0.25–>32 ≤0.016–>64 ≤0.25–>32 ≤0.13–4 ≤0.5–>128
445 390 445 445 445 445 445 216 359
Escherichia coli 3rd-GC-I/R 0.25/0.5 >8/>32 0.25/1 0.06/0.5 2/>32 >32/>64 >4/32 0.25/0.5 8/128
≤0.016–1 0.5–>32 0.03–>8 ≤1–>32 ≤0.25–>32 2–>64 ≤0.25–>32 ≤0.13–4 ≤0.5–>128
127 113 127 127 127 127 127 69 93
Escherichia coli FQ-R 0.25/0.5 >8/>32 0.25/0.5 0.13/≤0.5 4/>32 >16/>64 >4/32 0.25/0.5 8/>64
≤0.016–4 0.25–>32 0.06–>8 ≤1–>32 0.25–>32 0.06–>64 >2–>32 ≤0.13–4 1–>128
143 118 143 143 143 143 143 72 142
Escherichia coli AG-R 0.25/0.5 >8/>32 0.25/0.5 0.063/≤0.5 >8/>32 32/>64 >4/32 0.25/0.5 8/>64
≤0.016–1 0.25–>32 0.063–>8 ≤1–>32 >8–>32 0.06–>64 ≤0.25–>32 ≤0.13–0.5 ≤0.5–>128
79 69 79 79 79 79 79 44 78
Escherichia coli AG-R, FQ-R, 3rd-GC-I/R 0.25/0.5 >8/>32 0.25/0.5 0.063/0.5 >32/>32 >32/>64 >4/32 0.25/0.5 8/>128
≤0.016–1 0.5–>32 0.063–>8 ≤1–>32 >8–>32 4–>64 >2–>32 ≤0.12–0.5 1–>128
40 35 40 40 40 40 40 21 40
Escherichia coli TET-R 0.25/0.5 16/>32 0.25/0.5 0.063/≤0.5 2/>8 4/>32 1/32 0.25/0.5 4/>64
≤0.016–2 >8–>64 0.06–4 ≤1–>32 ≤0.25–>32 0.06–>64 ≤0.25–>32 ≤0.13–4 ≤0.5–>128
157 157 157 157 157 157 157 94 148
Haemophilus influenzae 0.13/0.25 0.5/1 0.13/0.25 1/2 ND <0.03/0.13 0.016/0.03 ND ND
≤0.016–0.5 ≤0.06–16 ≤0.016–1 0.06–8 ND ≤0.016–0.5 0.004–0.13 ND ND
114 114 114 101 ND 114 114 ND ND
Klebsiella pneumoniae 0.5/2 4/>32 0.5/2 0.25/>8 0.5/>8 8/>32 0.5/>32 0.5/1 8/>128
0.03–16 ≤0.25–>64 0.13–16 ≤0.002–>32 ≤0.25–>32 ≤0.016–>64 ≤0.25–>64 ≤0.13–>16 ≤0.5–>128
394 339 394 394 223 394 394 209 394
Klebsiella pneumoniae 3rd-GC-I/R 0.5/2 8/>32 1/4 1/16 4/16 >32/64 >4/>32 0.5/4 >64/>128
0.03–16 1–>64 0.13–16 ≤1–>32 0.25–>32 4–>64 ≤0.25–>64 ≤0.13–>16 0.5–>128
210 187 210 210 82 210 210 110 209
Klebsiella pneumoniae CARB-I/R 0.5/2 8/>32 1/2 >8/>32 4/>8 >32/>32 >4/>32 0.5/>4 >64/>128
0.13–16 1–>32 0.25–16 2–>32 0.25–>32 1–>64 0.06–>64 0.13–>16 4–>128
90 81 90 90 50 90 90 57 90
Klebsiella pneumoniae FQ-R 0.5/2 8/>32 1/2 1/32 4/32 >32/>32 >4/>32 0.5/>4 >64/>128
0.13–16 1–>32 0.13–16 ≤1–>32 ≤0.25–>32 0.25–>64 >2–>64 0.13–>16 4–>128
156 134 156 156 82 156 156 78 156
Klebsiella pneumoniae AG-R 0.5/2 8/>32 1/4 0.5/32 >8/>32 >32/>64 >4/>32 0.5/1 >64/>128
0.06–16 1–>32 0.13–16 ≤1–>32 >8–>32 0.25–>64 ≤0.25–>64 ≤0.13–>16 2–>128
119 106 119 119 59 119 119 61 118
Klebsiella pneumoniae AG-R, FQ-R, 3rd-GC-I/R 0.5/2 8/>32 1/4 1/32 >8/>32 >32/>32 8/>32 0.5/1 >64/>128
0.13–16 2–>32 0.13–16 ≤1–>32 >8–>32 8–>64 >2–>64 0.13- >16 4–>128
74 66 74 74 35 74 74 36 74
Klebsiella pneumoniae AG-R, FQ-R, CARB-I/R 0.5/2 8/>32 1/2 >8/>32 >8/>32 >32/>32 >4/>32 0.5/>4 >128/>128
0.13–16 4–>32 0.25–16 2–>32 >8–>32 >16–>64 >2–>64 0.13–>16 >64–>128
37 33 37 37 21 37 37 21 37
Klebsiella oxytoca 0.5/1 1/>32 0.5/2 ≤1/≤1 0.5/>32 ≤0.5/>32 ≤0.25/4 ≤0.13/0.13 2/16
0.03–2 0.5–>32 0.06–4 0.004–1 ≤0.13–>32 ≤0.016–>32 0.03–>32 0.03–>2 ≤0.5–>64
48 48 48 48 48 48 48 41 48
Klebsiella oxytoca 3rd-GC-I/R 0.5/1 >32/>32 0.25/0.5 0.06/0.25 >32/>32 >32/>32 0.5/>32 0.13/0.13 8/>32
0.03–1 0.5–>32 0.06–1 0.03–1 0.5–>32 4–>32 0.03–>32 0.03–0.13 0.5–>32
11 11 11 11 11 11 11 11 11
Legionella pneumophila 1/2 4/8 ND ND ND ND ND ND ND
0.016–2 0.5–8 ND ND ND ND ND ND ND
70 70 ND ND ND ND ND ND ND
Moraxella catarrhalis 0.03/0.06 ≤0.25/0.5 0.06/0.13 ≤0.25/≤0.25 ≤0.25/≤0.25 ≤0.5/≤0.5 ≤0.25/≤0.25 1/1 ≤0.5/≤0.5
≤0.016–0.06 ≤0.06–>32 ≤0.016–0.13 ≤0.25–≤0.25 ≤0.06–0.25 ≤0.5–2 ≤0.25–≤0.25 0.5–2 ≤0.5–2
92 92 92 78 78 78 92 28 28
Morganella morganii 1/2 2/>8 2/4 ≤1/2 1/>8 ≤0.5/8 ≤0.25/4 >2/>4 ≤0.5/2
0.5–4 0.5–>8 0.25–8 0.008–4 ≤0.25–>8 ≤0.016–>16 0.03–>4 >2–>4 ≤0.5–>64
43 43 43 43 43 43 43 39 43
Proteus mirabilis 1/2 >8/32 4/8 2/4 1/>8 ≤0.5/1 ≤0.25/>4 >2/>4 ≤0.5/2
0.25–16 2–>64 0.5–16 0.008–>32 ≤0.25–>64 ≤0.016–>64 0.016–>64 >2–>4 ≤0.016–64
166 111 166 166 166 166 166 95 157
Proteus mirabilis 3rd-GC-I/R 1/4 >8/64 4/8 4/8 8/16 8/>32 >2/8 ND 2/4
0.5–8 >8–64 1–16 0.25–32 0.5–>64 4–>64 ≤0.25–16 >2–>4 ≤0.5–64
21 15 21 21 21 21 21 9 19
Proteus mirabilis CARB-R 1/4 >8/32 4/8 2/8 1/>8 ≤0.5/2 ≤0.25/>4 >2/>4 ≤0.5/2
0.25–16 2–>64 1–16 0.06–>32 ≤0.25–>64 ≤0.016–>64 0.016–>64 >2–>4 ≤0.06–>64
136 81 136 136 136 136 136 67 127
Proteus mirabilis FQ-R 2/4 >8/64 4/8 4/8 2/16 ≤0.5/16 >4/16 >2/>4 1/2
0.5–16 >8–>64 1–16 0.25–32 ≤0.25–>64 ≤0.016–>64 >2–>64 >2–>4 ≤0.13–64
43 26 43 43 43 43 43 19 38
Proteus mirabilis AG-R 2/4 >8/>32 4/8 2/8 >8/>64 ≤0.5/32 >2/>4 >2/>4 0.5/4
0.5–8 >8–64 2–8 0.25–32 >8–>64 ≤0.016–>64 0.016–32 >2–>4 ≤0.13–8
24 16 24 24 24 24 24 12 23
Proteus mirabilis TET-R 1/2 >8/32 4/8 2/8 1/>8 ≤0.5/1 ≤0.25/>4 >2/>4 ≤0.5/2
0.25–16 >8–>64 0.5–16 0.008–>32 ≤0.25–>64 ≤0.015–>64 0.03–>64 >2–>4 ≤0.5–>64
109 109 109 109 109 109 109 93 100
Proteus vulgaris 0.5/1 8/>8 2/4 ≤1/2 1/4 ≤0.5/32 ≤0.25/0.5 >2/>2 ≤0.5/1
0.25–2 1–>8 0.5–8 ≤0.5–4 ≤0.25–>8 ≤0.03–>64 ≤0.25–4 >2–>4 ≤0.5–4
55 55 55 55 55 55 55 55 55
Providencia stuartii 1/2 >8/>8 2/4 2/4 4/32 <0.5/16 >2/>4 >2/>2 4/64
0.13–8 <0.25–>8 0.06–16 0.25–16 ≤0.25–>32 ≤0.016–>64 0.016–>4 >2–>4 ≤0.13–>128
101 51 101 101 101 101 101 51 101
Pseudomonas aeruginosa 8/32 >8/64 16/32 2/>8 2/>8 >16/>32 1/>4 1/2 8/>128
1–>32 8–64 1–>32 0.13–>32 0.13–>32 1–>64 0.06–>32 0.25–4 >64–>128
145 93 145 145 145 145 145 85 145
Salmonella spp. 0.25/0.25 1/>8 0.25/0.5 ≤1/≤1 0.5/1 ≤0.5/≤0.5 ≤0.25/≤0.25 ≤0.13/0.5 2/4
0.13–0.5 0.5–>8 0.13–1 ≤1–8 ≤0.25–>8 ≤0.5–≤0.5 ≤0.25–>4 ≤0.13–2 1–64
30 30 30 30 30 30 30 30 30
Serratia marcescens 1/1 >8/>8 1/2 0.5/1 0.5/1 ≤0.5/1 ≤0.25/1 >2/>4 2/4
0.25–8 2–>8 0.5–4 ≤0.25–2 ≤0.25–8 ≤0.5–>64 ≤0.25–>4 0.25–>4 ≤0.5–>64
112 112 112 112 112 112 112 112 112
Shigella spp. 0.13/0.5 >8/>8 0.25/0.5 ≤1/≤1 1/1 ≤0.5/≤0.5 ≤0.25/0.5 ≤0.13/≤0.13 2/2
0.06–1 ≤0.25–>8 0.13–1 ≤1–≤1 ≤0.25–>8 ≤0.5–2 ≤0.25–1 ≤0.13–≤0.13 ≤0.5–4
30 30 30 30 30 30 30 30 30
Stenotrophomonas maltophilia 0.5/2 >8/32 0.5/4 >8/>32 >8/>32 >32/>32 1/>4 >2/>32 >64/>128
≤0.016–8 0.5–>32 0.03–8 2–>32 ≤0.25–>32 1–>64 0.13–32 ≤0.13–>32 8–>128
105 105 105 105 105 105 105 104 105
a

CARB, carbapenem (imipenem, meropenem, or ertapenem); AG, aminoglycoside (gentamicin or tobramycin); 3rd-GC, third-generation cephalosporin (ceftazidime, cefotaxime, or ceftriaxone); FQ, fluoroquinolone (levofloxacin or ciprofloxacin); ERV, eravacycline; TET, tetracycline; TGC, tigecycline; CST, colistin; PTZ, piperacillin-tazobactam; ND, not determined.

b

For Enterobacteriaceae, carbapenem-I/R isolates were defined as having an imipenem/meropenem MIC of ≥2 μg/ml or an ertapenem MIC of ≥1 μg/ml, and for Acinetobacter, carbapenem-I/R isolates were defined as having an imipenem/meropenem MIC of ≥16 μg/ml.

c

Third-generation cephalosporin-I/R isolates were defined as having a ceftazidime MIC of ≥8 μg/ml and a cefotaxime/ceftriaxone MIC of ≥2 μg/ml.

d

Fluoroquinolone-resistant (FQ-R) isolates were defined as having a levofloxacin MIC of ≥8 μg/ml or a ciprofloxacin MIC of ≥4 μg/ml.

Eravacycline exhibited MIC90 values of ≤0.5 μg/ml against Escherichia coli (including ESBL-producing isolates), Salmonella spp., Shigella spp., Haemophilus influenzae, Moraxella catarrhalis, and Acinetobacter lwoffii. Of the 445 E. coli isolates tested, 29% (n = 127) were intermediately resistant (I) or resistant (R) to third-generation cephalosporins, including isolates confirmed by PCR to contain one or more of the following ESBLs or carbapenemases: CTX-M (n = 53), TEM (n = 35), OXA (n = 16), SHV (n = 22), CMY (n = 13), NDM (n = 2), ACT-5 (n = 1), and DHA-1 (n = 1). In addition to eravacycline maintaining an MIC50/90 of 0.25/0.5 μg/ml against the subset of E. coli isolates with I/R phenotypes for third-generation cephalosporins, this antibiotic was also equally potent against the fluoroquinolone-resistant (n = 143), aminoglycoside-resistant (n = 79), and multidrug-resistant (resistant to all three antibiotic classes) (n = 40) subsets of isolates. The MIC50/90 value for eravacycline for a subset of 157 tetracycline-resistant E. coli isolates was also 0.25/0.5 μg/ml, consistent with previous work showing that eravacycline was minimally affected by major Gram-negative tetracycline-specific resistance mechanisms (16).

Eravacycline MIC90 values were 1 to 2 μg/ml against panels of clinical isolates of Acinetobacter baumannii, Citrobacter freundii, Enterobacter cloacae, Enterobacter aerogenes, K. pneumoniae, Klebsiella oxytoca, Legionella pneumophila, Morganella morganii, Proteus mirabilis, Proteus vulgaris, Providencia stuartii, Serratia marcescens, and Stenotrophomonas maltophilia (Table 1). Notably, eravacycline MIC90 values were unchanged (MIC50/90 = 0.5/2 μg/ml) for subsets of C. freundii, E. cloacae, E. aerogenes, K. pneumoniae, and K. oxytoca isolates displaying third-generation cephalosporin I or R phenotypes. Among the 210 and 90 K. pneumoniae isolates displaying I/R phenotypes for third-generation cephalosporins and carbapenems, respectively, were isolates confirmed by PCR to contain genes encoding one or more of the following: CTX-M (n = 29), TEM (n = 17), OXA (n = 6), SHV (n = 57), KPC (n = 20), NDM (n = 3), DHA (n = 1), and FOX (n = 1). Susceptibility to eravacycline was also unchanged (MIC50/90 = 0.5/2 μg/ml) against subsets of K. pneumoniae isolates displaying fluoroquinolone-resistant (n = 156), aminoglycoside-resistant (n = 119), and multidrug-resistant (aminoglycoside, fluoroquinolone, and either carbapenem I/R [n = 37] or third-generation cephalosporin I/R [n = 74]) phenotypes. For A. baumannii isolates (n = 52) displaying resistance to carbapenems, fluoroquinolones, and aminoglycosides, MIC50/90 values for eravacycline were 0.5/2 μg/ml, or 2-fold higher than those of the combined set of strains; eravacycline MIC50/90 values were also minimally affected by tetracycline resistance in a subset of A. baumannii isolates (n = 69; MIC50/90 = 0.5/2 μg/ml). Activity of eravacycline against P. mirabilis isolates expressing fluoroquinolone-resistant (n = 43; MIC50/90 = 2/4 μg/ml), aminoglycoside-resistant (n = 24; MIC50/90 = 2/4 μg/ml), third-generation cephalosporin-I/R (n = 21; MIC50/90 = 1/4 μg/ml), carbapenem I/R (n = 136; MIC50/90 = 1/4 μg/ml), and tetracycline-resistant (n = 109; MIC50/90 = 1/2 μg/ml) phenotypes was within 2-fold the MIC50/90 values for all P. mirabilis isolates combined (MIC50/90 = 1/2 μg/ml). Against carbapenem-I/R (n = 34), fluoroquinolone-resistant (n = 36), aminoglycoside-resistant (n = 26), and tetracycline-resistant (n = 25) E. cloacae isolates, eravacycline showed MIC50/90 values of 0.5/2, 2/4, 0.5/2, and 2/4 μg/ml, respectively. P. aeruginosa isolates (n = 145) and Burkholderia cenocepacia isolates (n = 10) were relatively less susceptible to eravacycline, with MIC50/90 values of 8/32 μg/ml for both organisms.

Activity of eravacycline against Gram-positive pathogens.

Eravacycline showed excellent in vitro potency, with MIC90 values ranging from 0.016 to 0.5 μg/ml against methicillin-susceptible Staphylococcus aureus (MSSA), methicillin-resistant S. aureus (MRSA), coagulase-negative staphylococci, vancomycin-susceptible Enterococcus faecium and Enterococcus faecalis (VSE), vancomycin-resistant Enterococcus faecium and Enterococcus faecalis (VRE), penicillin-susceptible and -resistant Streptococcus pneumoniae, and macrolide-resistant S. pneumoniae, Streptococcus pyogenes, and other important streptococcal species (Table 2). For S. aureus, the activity of eravacycline was independent of methicillin susceptibility or the expression of Panton-Valentine leukocidin, a pore-forming toxin contributing to the virulence of community-acquired MRSA (CA-MRSA) (Table 2) (28). Eravacycline also showed good potency against subsets of MRSA isolates expressing macrolide resistance (n = 132; MIC50/90 = 0.06/0.25 μg/ml), fluoroquinolone resistance (n = 178; MIC50/90 = 0.06/0.13 μg/ml), and resistance to both antibiotic classes (n = 83; MIC50/90 = 0.06/0.25 μg/ml). Eravacycline showed MIC values of ≤0.03 (n = 3) and 0.5 μg/ml (n = 2) against daptomycin-nonsusceptible MRSA isolates, while the daptomycin MIC values for these isolates ranged from 2 to 4 μg/ml. The MIC range of eravacycline against linezolid-resistant MRSA isolates (n = 9) was ≤0.03 to 0.25 μg/ml, while linezolid MIC values ranged from 8 to 64 μg/ml. Eravacycline was similarly highly active against both E. faecium and E. faecalis, independent of vancomycin resistance (MIC90 = 0.06 to 0.13 μg/ml) (Table 2). Eravacycline was also highly active against a subset of levofloxacin-resistant E. faecalis (n = 111; MIC50/90 = 0.06/0.13 μg/ml) and E. faecium (n = 127; MIC50/90 = 0.06/0.06 μg/ml) isolates. The activity of eravacycline was not impacted by linezolid-resistant isolates of E. faecalis (n = 2; MIC, ≤0.016 and 0.06 μg/ml) and E. faecium (n = 1; MIC, ≤0.016 μg/ml). Eravacycline also showed good potency against daptomycin-nonsusceptible isolates, with MIC50/90 values against E. faecium (n = 44) of 0.06/0.06 μg/ml and an MIC range against E. faecalis (n = 7) of ≤0.016 to 0.03 μg/ml.

Table 2.

Susceptibilities of Gram-positive aerobic bacteria to eravacycline and comparatorsa

Organism MIC50/90 (μg/ml), MIC range (μg/ml), and no. of isolates
ERV TET TGC DAP LZD VAN LEV MACRO
Enterococcus faecalis 0.06/0.13 32/>32 0.13/0.25 2/4 2/2 2/>64 >8/>32 >8/>8
≤0.016–0.13 0.13–>32 ≤0.016–0.5 0.13–8 ≤0.5–32 0.5–>64 0.25–>32 ≤0.13–>8
194 98 194 194 194 150 194 59
Enterococcus faecalis VSE 0.06/0.13 32/>32 0.13/0.25 2/4 2/2 1/2 2/>32 >4/>8
≤0.016–0.13 0.13–>32 ≤0.016–0.5 0.13–8 ≤0.5–32 0.5–4 0.25–>32 ≤0.13–>8
121 70 121 121 121 92 121 38
Enterococcus faecalis VRE 0.06/0.13 32/>32 0.13/0.25 2/4 2/2 >64/>64 >32/>32 >8/>8
≤0.016–0.13 1–>32 0.03–0.25 0.13–8 1–8 >16–>64 0.25–>32 2–>8
73 28 73 73 73 58 73 21
Enterococcus faecalis FQ-R 0.06/0.13 32/>32 0.13/0.25 2/4 2/2 >64/>64 >32/>32 >8/>8
≤0.016–0.13 0.13–>32 ≤0.016–0.5 ≤0.5–8 1–32 1–>64 >4–>32 ≤0.13–32
111 48 111 111 111 87 111 34
Enterococcus faecium 0.06/0.06 ≤2/>32 0.06/0.13 4/8 2/4 2/>64 >32/>32 >8/>8
≤0.016–0.5 0.25–>32 ≤0.016–0.5 1–16 ≤0.5–32 ≤0.5–>64 0.25–>32 0.25–>8
153 59 153 153 153 108 153 56
Enterococcus faecium VSE 0.06/0.13 1/>32 0.06/0.13 4/8 2/2 1/1 >8/>32 >8/>8
0.03–0.5 0.25–>32 0.03–0.25 1–8 1–4 ≤0.5–4 0.25–>32 0.25–>8
84 33 84 84 84 58 84 33
Enterococcus faecium VRE 0.06/0.06 32/>32 0.06/0.13 4/8 2/4 >64/>64 >32/>32 >8/>8
≤0.016–0.25 0.25–>32 0.03–0.5 1–16 ≤0.5–32 >16–>64 1–>32 8–>8
69 26 69 69 69 49 69 24
Enterococcus faecium FQ-R 0.06/0.06 2/>32 0.06/0.12 4/8 2/4 32/>64 >32/>32 >8/>8
≤0.016–0.5 0.25–>32 ≤0.016–0.5 1–16 ≤0.5–32 ≤0.5–>64 >4–>32 >4–>8
127 48 127 127 127 88 127 45
Enterococcus faecium DAP-NS 0.06/0.06 ND 0.06/0.13 8/16 4/4 >64/>64 >32/>32 ND
≤0.016–0.5 ND 0.03–0.25 8–16 1–32 0.5–>64 2–>32 ND
44 ND 44 44 44 44 44 ND
Enterococcus spp. 0.03/0.06 0.5/32 0.13/0.13 0.5/2 2/2 ND 1/>8 0.5/>8
≤0.016–0.13 ≤0.06–>32 ≤0.016–0.25 0.25–4 1–2 ND ≤0.13–>8 ≤0.13–>8
29 29 29 29 29 ND 29 29
Staphylococcus aureus 0.06/0.25 0.25/32 0.13/0.25 1/1 2/4 1/1 1/32 >8/>32
≤0.016–4 0.06–>64 ≤0.016–16 0.063–4 1–64 0.5–8 0.06–>64 0.13–>64
408 245 408 407 407 258 399 237
MRSA 0.06/0.13 0.25/32 0.13/0.25 1/1 2/4 1/1 8/>32 >8/>32
0.016–4 0.063–>64 ≤0.016–1 0.063–4 1–64 0.5–8 0.06–>64 0.13–>64
284 177 284 283 283 202 275 169
MRSA PVL+ 0.03/0.03 0.25/0.25 0.13/0.13 0.5/1 1/2 1/1 0.25/>2 >4/>4
≤0.016–0.03 0.13–0.25 0.06–0.13 0.5–1 1–2 1–1 0.25–>2 1–>4
30 30 30 30 30 30 30 30
Staphylococcus aureus MACRO-Rb 0.06/0.25 0.25/32 0.13/0.25 0.5/1 2/4 1/1 8/32 >8/>32
≤0.016–4 0.06–>64 ≤0.016–16 0.13–4 1–64 0.5–8 0.06–>64 >4–>64
132 132 132 131 131 70 132 132
Staphylococcus aureus FQ-R 0.06/0.13 0.25/32 0.12/0.25 1/1 2/4 1/1 >8/>32 >8/>32
≤0.016–2 0.06–>64 ≤0.016–16 0.125–2 1–64 0.5–8 >2–>64 0.25–>64
178 109 178 178 178 126 174 105
Staphylococcus aureus MACRO-R, FQ-R 0.06/0.25 0.25/>32 0.13/0.25 0.5/1 2/4 1/2 >8/32 >8/>32
≤0.016–2 0.06–>64 ≤0.016–16 0.13–2 1–64 0.5–8 >2–>64 >4–>64
83 83 83 83 83 45 83 83
MSSA 0.13/0.25 0.5/1 0.13/0.25 1/1 4/4 1/1 0.25/1 1/>8
0.03–0.25 0.25–32 0.06–0.25 0.25–1 2–4 0.5–2 0.13–>32 0.25–>8
124 68 124 124 124 56 124 68
Coagulase-negative staphylococci 0.06/0.5 0.25/32 0.25/1 1/1 2/2 1/2 0.5/>32 0.5/>8
≤0.016–2 ≤0.06–>32 0.03–2 0.25–2 ≤0.5–4 0.5–2 0.13–>32 ≤0.13–>8
165 59 165 165 165 111 165 59
Coagulase-negative staphylococci, methicillin sensitive 0.06/0.5 0.25/32 0.25/1 1/1 2/2 1/2 0.25/>8 0.25/>8
≤0.016–1 ≤0.06–>32 0.03–2 0.25–2 ≤0.5–4 0.5–2 0.13–>32 ≤0.13–>8
89 37 89 89 89 54 89 37
Coagulase-negative staphylococci, methicillin resistant 0.06/0.5 0.25/>32 0.13/0.5 1/1 1/2 1/2 8/>32 >4/>8
0.03–2 0.25–>32 0.06–1 0.25–2 ≤0.5–2 0.5–2 0.13–>32 0.25–>8
76 22 76 76 76 57 76 22
Streptococcus pneumoniae 0.016/0.016 0.25/>8 0.016/0.03 ≤0.03/0.5 0.5/1 0.25/0.5 1/1 2/>2
≤0.008–0.03 ≤0.03–>8 ≤0.008–0.06 ≤0.03–2 ≤0.13–2 0.13–0.5 ≤0.03–>8 ≤0.03–>2
182 100 182 182 182 82 182 100
Streptococcus pneumoniae penicillin resistantc 0.016/0.016 >8/>8 0.016/0.03 ≤0.03/0.5 0.5/1 0.25/0.25 1/1 >2/>2
≤0.008–0.03 0.13–>8 ≤0.008–0.03 ≤0.03–0.5 0.25–1 0.13–0.5 0.5–>8 ≤0.03–>2
60 33 60 60 60 27 60 33
Streptococcus pneumoniae MACRO-Rd ≤0.008/0.016 >8/>8 0.016/0.03 ≤0.03/≤0.03 0.5/0.5 ND 1/1 >2/>2
≤0.008–0.016 ≤0.03–>8 ≤0.008–0.03 ≤0.03–0.13 0.25–1 ND 0.5–>8 2–>2
53 53 53 53 53 ND 53 53
Streptococcus pneumoniae penicillin resistant, MACRO-R ≤0.008/0.016 >8/<8 0.016/0.03 ≤0.03/≤0.03 0.5/0.5 ND 1/1 >2/>2
≤0.008–0.016 0.13–>8 ≤0.008–0.03 ≤0.03–≤0.03 0.25–0.5 ND 0.5–>8 2–>2
29 29 29 29 29 ND 29 29
Streptococcus pneumoniae TET-R ≤0.008/0.016 >8/>8 0.016/0.03 ≤0.03/≤0.03 0.5/0.5 ND 1/1 >2/>2
≤0.008–0.016 >8–>8 ≤0.008–0.03 ≤0.03–0.06 0.25–0.5 ND 0.5–>2 2–>2
34 34 34 34 34 ND 34 34
Streptococcus pyogenes 0.03/0.03 0.25/0.25 0.03/0.06 0.13/0.13 1/2 ND 0.5/1 0.06/0.06
0.015–0.13 0.13–>8 ≤0.016–0.13 ≤0.03–0.25 0.5–2 ND 0.25–2 ≤0.03–0.13
74 20 74 74 74 ND 74 20
Streptococcus agalactiae 0.03/0.06 >8/>8 0.03/0.06 0.06/0.5 1/2 0.5/0.5 0.5/1 0.06/>4
0.016–0.06 0.25–>8 0.016–0.13 ≤0.03–1 0.5–2 0.25–0.5 0.5–2 ≤0.03–>4
123 79 123 123 123 48 123 79
Streptococcus anginosus 0.016/0.031 0.5/>16 0.016/0.06 0.25/0.5 1/2 0.5/1 0.5/1 0.03/>0.5
≤0.008–0.13 ≤0.06–>16 ≤0.008–0.25 ≤0.03–0.5 ≤0.25–2 ≤0.008–1 ≤0.25–2 ≤0.016–>2
47 47 47 25 47 46 25 25
Streptococcus intermedius 0.016/0.06 0.25/>4 0.03/0.13 0.5/1 1/1 0.5/0.5 1/2 0.06/>0.5
≤0.008–0.06 ≤0.06–>4 ≤0.008–0.25 ≤0.03–>1 ≤0.25–1 ≤0.06–0.5 ≤0.25–>4 ≤0.016–>0.5
31 31 31 31 31 31 30 31
Streptococcus mitis 0.016/0.06 0.5/>4 0.03/0.13 0.5/1 1/1 0.5/0.5 1/2 >0.5/>0.5
≤0.008–0.06 0.13–>8 ≤0.008–0.25 0.06–>1 0.5–1 ≤0.06–1 0.5–>4 ≤0.016–>2
32 32 32 32 32 31 32 32
Streptococcus spp. 0.016/0.13 1/>8 0.03/0.13 0.13/1 0.5/1 0.5/1 1/2 0.06/>2
≤0.008–0.25 ≤0.06–>8 ≤0.008–0.25 ≤0.03–1 ≤0.25–2 ≤0.06–1 ≤0.25–2 ≤0.016–>2
62 62 62 62 62 21 62 62
a

MACRO, macrolide (erythromycin, azithromycin, or clarithromycin); ND, not determined; ERV, eravacycline; TET, tetracycline; TGC, tigecycline; DAP, daptomycin; LZD, linezolid; VAN, vancomycin; LEV, levofloxacin; DAP-NS, daptomycin nonsusceptible; PVL+, Panton-Valentine leukocidin positive.

b

Macrolide-resistant staphylococci were defined as having an erythromycin/azithromycin/clarithromycin MIC of ≥8 μg/ml.

c

Penicillin-resistant streptococcal isolates were defined as having an MIC of ≥2 μg/ml for the oral penicillin breakpoint.

d

Macrolide-resistant streptococcal isolates were defined as having an erythromycin/clarithromycin MIC of ≥1 μg/ml and an azithromycin MIC of ≥2 μg/ml.

Eravacycline was highly active against all streptococci, showing MIC90 values no higher than 0.13 μg/ml against all species, including S. pneumoniae, S. pyogenes, S. agalactiae, S. anginosus, S. intermedius, and S. mitis (Table 2). For S. pneumoniae, activity was unaffected by isolates expressing penicillin resistance, macrolide resistance (Table 2), or both phenotypes together (n = 29; MIC50/90, ≤0.008/0.016 μg/ml). Against tetracycline-resistant S. pneumoniae (n = 34), eravacycline displayed MIC50/90 values of ≤0.008/0.016 μg/ml.

Activity of eravacycline against anaerobic pathogens.

Eravacycline was tested against 292 clinical Gram-negative and Gram-positive anaerobic strains (Table 3). For Gram-negative species, eravacycline showed MIC50/90 values of 0.5/1 μg/ml against Bacteroides fragilis (n = 36), with similar potency against a subset of Cefinase-positive isolates (n = 20). Eravacycline was less active against Bacteroides ovatus and Bacteroides thetaiotaomicron (n = 11 for each species), with MIC50/90 values of 1/4 μg/ml, but showed MIC50/90 values of 0.25/0.25 μg/ml against Bacteroides vulgatus, 0.5/1 μg/ml against Parabacteroides distasonis (formerly of the Bacteroides genus), and 0.13/0.25 μg/ml against Fusobacterium spp., a group similar to Bacteroides. For other Gram-negative anaerobes (Porphyromonas asaccharolytica and Prevotella spp.), eravacycline MIC90 values ranged from 0.06 to 1 μg/ml.

Table 3.

Susceptibilities of anaerobic bacteria to eravacycline and comparatorsa

Organism MIC50/90 (μg/ml), MIC range (μg/ml), and no. of isolates
ERV TGC CARB MTZ VAN
Actinomyces spp. ND ND ND ND ND
0.25–0.25 0.25–0.5 ND 4–>16 ND
5 5 ND 5 ND
Anaerococcus spp. 0.13/0.13 0.13/0.25 ND 2/2 ND
0.03–0.25 0.06–0.25 ND 0.5–4 ND
10 10 ND 10 ND
Bacteroides fragilis 0.5/1 0.5/4 0.25/1 1/1 >16/>16
0.06–2 0.13–8 0.13–4 0.25–>16 16–>16
36 36 16 31 11
B. fragilis cefinase positive 0.5/1 1/4 ND 1/1 ND
0.13–2 0.25–8 ND 0.25–1 ND
20 20 ND 20 ND
Bacteroides ovatus 1/4 0.5/16 0.25/0.25 1/2 >16/>16
0.016–8 0.06–32 0.03–1 0.13–>16 8–>16
11 11 11 10 10
Bacteroides thetaiotaomicron 1/4 8/16 0.5/2 1/2 >16/>16
0.13–4 0.25–16 0.13–4 0.5–>16 16–>16
11 11 11 10 10
Bacteroides vulgatus 0.25/0.25 0.5/0.5 0.25/1 0.5/1 >16/>16
0.13–1 0.13–4 0.25–1 0.5–1 16–>16
12 12 12 10 10
Bifidobacterium spp. ND ND ND ND ND
0.13–0.5 0.25–0.5 ND 2–>16 ND
7 7 ND 6 ND
Clostridium difficile 0.06/0.13 0.13/0.13 4/8 1/1 1/2
0.03–0.25 0.06–0.5 0.25–8 0.5–2 0.5–4
11 11 11 11 11
Clostridium perfringens 1/2 1/4 0.13/0.5 4/16 1/>16
0.06–4 0.13–8 0.06–1 2–>16 0.5–>16
11 11 11 10 10
Eggerthella lenta 0.25/0.25 0.5/0.5 ND 0.5/0.5 ND
0.25–0.25 0.25–0.5 ND 0.25–0.5 ND
12 12 ND 12 ND
Finegoldia magna 0.25/0.5 0.25/0.25 ND 0.5/1 ND
0.13–0.5 0.13–0.25 ND ≤0.13–1 ND
10 10 ND 10 ND
Fusobacterium spp. 0.13/0.25 0.13/0.5 ND ≤0.13/0.25 ND
0.03–0.25 0.06–0.5 ND ≤0.13–0.25 ND
21 21 ND 21 ND
Lactobacillus spp. 0.25/0.5 0.5/0.5 ND >16/>16 ND
0.25–1 0.25–1 ND >16–>16 ND
7 7 ND 7 ND
Parabacteroides distasonis 0.5/1 1/2 ND 1/1 ND
0.25–1 0.25–4 ND 0.5–1 ND
10 10 ND 10 ND
Peptoniphilus asaccharolyticus 0.06/0.13 0.13/0.25 ND 1/2 ND
0.03–0.13 0.06–0.25 ND 0.5–2 ND
10 10 ND 10 ND
Peptostreptococcus anaerobius 0.06/0.25 0.06/0.25 0.06/1 1/2 0.5/2
0.016–0.25 0.016–0.5 0.03–1 0.25–2 0.5–>16
10 10 10 10 10
Peptostreptococcus micros 0.016/0.25 0.03/0.25 0.016/0.03 0.25/>16 1/1
0.016–0.5 0.016–1 ≤0.008–0.03 ≤0.008–>16 0.5–2
10 10 10 10 10
Porphyromonas asaccharolytica 0.03/0.06 0.06/0.06 0.016/0.03 1/2 0.25/0.5
0.016–0.13 0.03–0.13 ≤0.008–0.06 0.5–4 0.13–1
10 10 10 10 10
Prevotella bivia 1/1 1/2 ND 1/4 ND
0.13–1 0.03–2 ND 0.5–4 ND
13 13 ND 13 ND
Prevotella buccae 0.06/0.13 0.13/0.13 ND 0.5/1 ND
0.03–0.13 0.06–0.25 ND 0.25–1 ND
10 10 ND 10 ND
Prevotella disiens 0.13/0.25 0.25/0.5 ND 1/1 ND
0.06–0.25 0.13–0.5 ND 0.5–2 ND
12 12 ND 12 ND
Prevotella intermedia 0.06/0.13 0.25/0.25 ND 0.5/0.5 ND
0.03–0.13 0.13–0.25 ND 0.25–1 ND
10 10 ND 10 ND
Prevotella melaninogenica 0.13/1 0.5/1 ND 0.25/1 ND
0.06–1 0.06–4 ND ≤0.008–>16 1–>16
13 13 ND 13 8
Prevotella spp. ND ND ND ND ND
0.03–1 0.06–0.5 ND 0.25–>16 ND
7 7 ND 7 ND
Propionibacterium acnes ND ND ND ND ND
0.13–0.13 0.13–0.13 ND >16–>16 ND
5 5 ND 5 ND
a

ERV, eravacycline; TGC, tigecycline; MTZ, metronidazole; VAN, vancomycin; CARB, ertapenem or imipenem; ND, not determined.

Eravacycline showed MIC90 values of 0.13 to 0.5 μg/ml for Gram-positive anaerobes, including Clostridium difficile, Peptostreptococcus spp., Actinomyces spp., Anaerococcus spp., Bifidobacterium spp., Eggerthella spp., Finegoldia magna, Lactobacillus spp., Peptoniphilus asaccharolyticus, and Propionibacterium acnes. The MIC90 value was 2 μg/ml for 11 isolates of Clostridium perfringens. The anaerobic panels were biased to contain strains with therapeutically important antibiotic resistance phenotypes, and many of the Bacteroides species, Prevotella species, Peptostreptococcus species, Propionibacterium acnes, and Clostridium perfringens isolates were vancomycin resistant and/or metronidazole resistant; however, there was no impact on eravacycline activity in strains having the resistance phenotype(s). Eravacycline had the most consistent broad-spectrum activity against the anaerobic species compared to all comparators.

Eravacycline potency compared to that of tigecycline.

Tigecycline, a 9-t-butylglycylamido derivative of minocycline, is the most recent tetracycline to be approved for intravenous (i.v.) use in complicated intra-abdominal infections, complicated skin and skin structure infections, and complicated community-acquired bacterial pneumonia (29). For the vast majority of Gram-negative organisms tested in this study, the MIC90 values of eravacycline (Table 1) were found to be ≥2-fold lower than those of tigecycline; these organisms included A. baumannii, A. lwoffii, C. freundii, E. aerogenes, K. oxytoca, M. catarrhalis, M. morganii, P. mirabilis, P. vulgaris, P. stuartii, Salmonella spp., S. marcescens, and S. maltophilia, plus certain panels with I/R phenotypes for third-generation cephalosporins (C. freundii, E. aerogenes, E. cloacae, E. coli, K. pneumoniae, and P. mirabilis). Notably, eravacycline has MIC50/90 values of 1/2, 0.5/1, 1/1, and 1/2 μg/ml against P. mirabilis (n = 166), P. vulgaris (n = 55), P. stuartii (n = 101), and M. morganii (n = 43), respectively, compared to MIC50/90 values of 2/8, 2/4, 2/4, and 2/4 μg/ml for tigecycline against each species of the tribe Proteeae, respectively. For Gram-positive organisms, a ≥2-fold greater potency for eravacycline than for tigecycline by MIC90 value was noted for E. faecalis (VRE and VSE), E. faecium (VRE), Enterococcus spp., S. aureus (MRSA), coagulase-negative staphylococci (methicillin sensitive), S. pneumoniae, S. pyogenes, S. anginosus, S. intermedius, and S. mitis (Table 2), and similarly for anaerobes, eravacycline exhibited a ≥2-fold greater potency by MIC90 value than tigecycline for Anaerococcus spp., B. fragilis, B. ovatus, B. thetaiotaomicron, B. vulgatus, C. perfringens, Eggerthella lenta, Fusobacterium spp., P. distasonis, P. asaccharolyticus, Prevotella bivia, Prevotella disiens, and Prevotella intermedia (Table 3).

The relative MIC90 values of eravacycline and tigecycline were examined on a strain-by-strain basis for select Gram-negative pathogen panels (Table 4). This comparison revealed that eravacycline was ≥2-fold more active than tigecycline for 87% of A. baumannii isolates, 32% of E. coli isolates, 59% of E. cloacae isolates, 46% of K. pneumoniae isolates, 92% of P. mirabilis isolates, and 78% of B. fragilis isolates. For the majority of the remaining isolates in each panel, the activity of eravacycline was similar to that of tigecycline.

Table 4.

Distribution of tigecycline/eravacycline MIC ratiosa for individual isolates

TGC/ERV MIC ratio No. of isolates with TGC/ERV ratio
A. baumannii E. coli E. cloacae K. pneumoniae P. mirabilis B. fragilis
32 2
16 1 4 3
8 39 7 4 4 5 1
4 80 27 21 35 82 6
2 44 106 134 140 65 21
1 20 211 95 185 13 8
0.5 4 86 15 27 0
0.25 2 1 1
Total 188 445 270 394 166 36
a

For each isolate within a given organism panel, the ratio of the tigecycline MIC to the eravacycline MIC (TGC/ERV MIC) was calculated.

Eravacycline was also evaluated against S. aureus isolates with upregulated expression of norA (24) or mepA (25), genes encoding pumps conferring antibiotic resistance to quinolones (NorA) and tigecycline (MepA), respectively (30, 31) (Table 5). Eravacycline retained activity in strains overexpressing either norA or mepA (MICs of ≤0.016 μg/ml), whereas tigecycline was 64-fold less active when mepA was overexpressed, and ciprofloxacin was 32-fold less active when norA was overexpressed.

Table 5.

Activity of eravacycline against S. aureus strains expressing NorA or MepA efflux pumps

Compound MIC (μg/ml)
SA981 (parent) SA982 (norA) SA983 (parent) SA984 (mepA)
Eravacycline 0.004 0.004 0.004 0.016
Tigecycline 0.063 0.13 0.016 1
Tetracycline 0.5 0.5 0.5 0.5
Ciprofloxacin 0.5 16 2 4
Meropenem 0.25 0.13 0.13 0.13

DISCUSSION

A recent survey of infectious disease specialists rated treatment for multidrug-resistant Gram-negative infections as the most important unmet clinical need in current practice, significantly outranking infections with MRSA and multidrug-resistant Mycobacterium tuberculosis (32). In the survey, 63% of physicians reported treating a patient in the past year whose infection was resistant to all available antibacterial agents. Multiple Gram-negative species are responsible for causing substantial increases in the rates of antibiotic-resistant infections and subsequent illness and death. For example, the rate of resistance to ceftazidime among K. pneumoniae strains isolated in the United States from 1998 to 2010 rose from 5.5 to 17.2% (33). Recent deaths at the Clinical Center of the U.S. National Institutes of Health due to K. pneumoniae, and the difficulty of eradication of this blaKPC clone, are illustrative of a Gram-negative problem with few to no treatment options (5). Infections due to antibiotic-resistant Gram-negative strains of Acinetobacter, Enterobacter, and Pseudomonas can be particularly life threatening, having mortality rates of 26%, 27%, and 21 to 54%, respectively, as well as causing increased hospital costs and length of stay (3438).

Serious infections caused by Gram-negative bacteria such as A. baumannii and ESBL-producing Enterobacteriaceae are becoming increasingly more difficult to treat due to the evolution and spread of isolates expressing multiple antibiotic resistance mechanisms (39). ESBL-producing and carbapenem-resistant Enterobacteriaceae are frequently seen in complicated urinary tract infections (cUTIs) in patients from either the hospital or the community (3, 40, 41). Treatment with 1.5 mg/kg of body weight i.v. eravacycline every 24 h (q24h) provides urine concentrations within 8 h of the first dose that are 4- to 14-fold in excess of eravacycline's MIC90 values for common cUTI pathogens (MIC90 values of 0.5 to 2 μg/ml, except for P. aeruginosa) (42). This is in contrast to the reported urine levels of tigecycline of ∼0.3 μg/ml after a 100-mg i.v. dose (43).

Multidrug-resistant Gram-positive pathogens in hospital and community settings are of particular public health concern (44). Despite gains made in detecting and reducing MRSA infection during hospitalization, the risk of MRSA infection among critically and chronically ill carriers persists after discharge (45). The spread of resistance and the incidence of multidrug-resistant Streptococcus pneumoniae leave few alternatives to effectively treat severe respiratory infections empirically (46). The dissemination of multidrug-resistant Staphylococcus aureus, especially the now pandemic, highly virulent CA-MRSA, and vancomycin-resistant enterococci also leaves few empirical antibiotic options for treating serious infections caused by these organisms (28, 47). Eravacycline has the requisite potency in vitro against all species of Gram-positive bacteria and was found to cure 100% of patients who had a Gram-positive aerobe as one of their baseline pathogens in a phase 2 trial for treatment of complicated intra-abdominal infections (20).

Anaerobes are important pathogens, especially in patients with weakened immune systems, and are commonly recovered in complicated intra-abdominal infections and diabetic foot ulcers. The Bacteroides fragilis group constitutes the most important clinical group of these organisms, but infections with other anaerobes are increasingly being encountered.

Eravacycline possesses unique chemical modifications at C-9 and C-7 of the tetracycline core that confer potent, broad-spectrum antibacterial activity, especially against difficult-to-treat, multidrug-resistant pathogens. The activity of eravacycline was previously shown to be minimally affected by tetracycline-specific efflux and ribosome protection and inactivation (16). In the present study, eravacycline showed greater overall potency than other broad- and narrow-spectrum comparator antibiotics against large panels of isolates with significant representations of multidrug-resistant isolates. Eravacycline is differentiated from tigecycline, the most recently approved tetracycline-class antibiotic in clinical use, by its in vitro superior activity across multiple organisms, particularly multidrug-resistant Acinetobacter spp. and ESBL-producing Enterobacteriaceae, as well as by its promising pharmacokinetics, tolerability, and potential for oral dosing (4851). The clinical efficacies in the microbiologically evaluable population were 92.9 and 100% for eravacycline intravenous doses of 1.5 mg/kg q24h and 1.0 mg/kg q12h, respectively, in a recent phase 2 trial for i.v. treatment of complicated intra-abdominal infections compared to the standard-of-care antibiotic ertapenem (92.3%). In this trial, 25% of the Gram-negative aerobic pathogens in the microbiological modified intent-to-treat population produced at least one ESBL, with 15.8% of the Enterobacteriaceae isolates being resistant to at least three antibiotics (20, 52). Eravacycline is a promising new therapy for empirical use for serious infections caused by new and emerging multidrug-resistant Gram-negative, Gram-positive, and anaerobic pathogens, and phase 3 clinical trials for treatment of complicated intra-abdominal infections and complicated urinary tract infections are planned (20, 48, 51).

ACKNOWLEDGMENT

This work was funded in part by the Biomedical Advanced Research and Development Authority (BARDA) through contract no. HHSO10020120002C.

Footnotes

Published ahead of print 26 August 2013

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