Abstract
During the lysogenic response to infection by bacteriophage lambda, the phage-specified cII and cIII proteins provide for the coordinate establishment of repression and integration of the viral DNA. One critical regulatory function of cII/cIII is an activation of synthesis of the cI protein, the repressor that maintains lysogeny. The mechanism and site for regulation of the cI gene by cII/cIII have been a subject of controversy. The two principal hypotheses for cII/cIII action are: initiation of new RNA chains in the y region of lambda DNA just to the left of the cII gene; or antitermination of a short leader RNA (4S or oop RNA) initiated to the right of the cII gene. In an effort to distinguish between these hypotheses, we have studied the cII-mediated turn-on of cI protein synthesis in three classes of prophage deletion strains: deletions of the 4S RNA promoter but not the y region, deletions that remove both regions, and deletions that leave both intact. We find that an intact y region is required for normal regulation of the cI gene by cII, but the 4S RNA promoter is not. From experiments with other mutants, we conclude that rightward transcription from the early lytic promoter is also not necessary for positive regulation. Our results suggest that positive regulation by cII/cIII involves initiation of new RNA chains through activation of promoter sites.
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Selected References
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- Adhya S., Cleary P., Campbell A. A deletion analysis of prophage lambda and adjacent genetic regions. Proc Natl Acad Sci U S A. 1968 Nov;61(3):956–962. doi: 10.1073/pnas.61.3.956. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Belfort M., Noff D., Oppenheim A. B. Isolation, characterization and deletion mapping of amber mutations in the cll gene of phage lambda. Virology. 1975 Jan;63(1):147–159. doi: 10.1016/0042-6822(75)90380-3. [DOI] [PubMed] [Google Scholar]
- Brachet P., Thomas R. Mapping and functional analysis of y and CII mutants. Mutat Res. 1969 Mar-Apr;7(2):257–260. doi: 10.1016/0027-5107(69)90041-4. [DOI] [PubMed] [Google Scholar]
- CAMPBELL A. Sensitive mutants of bacteriophage lambda. Virology. 1961 May;14:22–32. doi: 10.1016/0042-6822(61)90128-3. [DOI] [PubMed] [Google Scholar]
- Castellazzi M., Brachet P., Eisen H. Isolation and characterization of deletions in bacteriophage lambda residing as prophage in E. coli K 12. Mol Gen Genet. 1972;117(3):211–218. doi: 10.1007/BF00271648. [DOI] [PubMed] [Google Scholar]
- Chung S., Echols H. Positive regulation of integrative recombination by the cII and cIII genes of bacteriophase lambda. Virology. 1977 Jun 15;79(2):312–319. doi: 10.1016/0042-6822(77)90358-0. [DOI] [PubMed] [Google Scholar]
- Court D., Green L., Echols H. Positive and negative regulation by the cII and cIII gene products of bacteriophage lambda. Virology. 1975 Feb;63(2):484–491. doi: 10.1016/0042-6822(75)90321-9. [DOI] [PubMed] [Google Scholar]
- Echols H. Developmental pathways for the temperate phage: lysis vs lysogeny,. Annu Rev Genet. 1972;6(0):157–190. doi: 10.1146/annurev.ge.06.120172.001105. [DOI] [PubMed] [Google Scholar]
- Echols H., Green L. Establishment and maintenance of repression by bacteriophage lambda: the role of the cI, cII, and c3 proteins. Proc Natl Acad Sci U S A. 1971 Sep;68(9):2190–2194. doi: 10.1073/pnas.68.9.2190. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Echols H., Green L., Oppenheim A. B., Oppenheim A., Honigman A. Role of the cro gene in bacteriophage lambda development. J Mol Biol. 1973 Oct 25;80(2):203–216. doi: 10.1016/0022-2836(73)90167-8. [DOI] [PubMed] [Google Scholar]
- Eisen H., Brachet P., Pereira da Silva L., Jacob F. Regulation of repressor expression in lambda. Proc Natl Acad Sci U S A. 1970 Jul;66(3):855–862. doi: 10.1073/pnas.66.3.855. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Eisen H., Georgiou M., Georgopoulos C. P., Selzer G., Gussin G., Herskowitz I. The role of gene cro in phage development. Virology. 1975 Nov;68(1):266–269. doi: 10.1016/0042-6822(75)90168-3. [DOI] [PubMed] [Google Scholar]
- Folkmanis A., Maltzman W., Mellon P., Skalka A., Echols H. The essential role of the cro gene in lytic development by bacteriophage lambda. Virology. 1977 Sep;81(2):352–362. doi: 10.1016/0042-6822(77)90151-9. [DOI] [PubMed] [Google Scholar]
- Furth M. E., Blattner F. R., McLeester C., Dove W. F. Genetic structure of the replication origin of bacteriophage lambda. Science. 1977 Dec 9;198(4321):1046–1051. doi: 10.1126/science.929186. [DOI] [PubMed] [Google Scholar]
- Hartree E. F. Determination of protein: a modification of the Lowry method that gives a linear photometric response. Anal Biochem. 1972 Aug;48(2):422–427. doi: 10.1016/0003-2697(72)90094-2. [DOI] [PubMed] [Google Scholar]
- Hayes S., Hayes C. Control of lambda repressor prophage and establishment transcription by the product of gene tof. Mol Gen Genet. 1978 Aug 4;164(1):63–76. doi: 10.1007/BF00267600. [DOI] [PubMed] [Google Scholar]
- Hayes S., Szybalski W. Control of short leftward transcripts from the immunity and ori regions in induced coliphage lambda. Mol Gen Genet. 1973 Nov 22;126(4):275–290. doi: 10.1007/BF00269438. [DOI] [PubMed] [Google Scholar]
- Herskowitz I. Control of gene expression in bacteriophage lambda. Annu Rev Genet. 1973;7:289–324. doi: 10.1146/annurev.ge.07.120173.001445. [DOI] [PubMed] [Google Scholar]
- Honigman A., Hu S. L., Chase R., Szybalski W. 4S oop RNA is a leader sequence for the immunity-establishment transcription in coliphage lambda. Nature. 1976 Jul 8;262(5564):112–116. doi: 10.1038/262112a0. [DOI] [PubMed] [Google Scholar]
- Jones B. B., Chan H., Rothstein S., Wells R. D., Reznikoff W. S. RNA polymerase binding sites in lambdaplac5 DNA. Proc Natl Acad Sci U S A. 1977 Nov;74(11):4914–4918. doi: 10.1073/pnas.74.11.4914. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Jones M. O., Herskowitz I. Mutants of bacteriophage lambda which do not requre the cIII gene for efficient lysogenization. Virology. 1978 Jul 15;88(2):199–212. doi: 10.1016/0042-6822(78)90277-5. [DOI] [PubMed] [Google Scholar]
- KAISER A. D., JACOB F. Recombination between related temperate bacteriophages and the genetic control of immunity and prophage localization. Virology. 1957 Dec;4(3):509–521. doi: 10.1016/0042-6822(57)90083-1. [DOI] [PubMed] [Google Scholar]
- KAISER A. D. Mutations in a temperate bacteriophage affecting its ability to lysogenize Escherichia coli. Virology. 1957 Feb;3(1):42–61. doi: 10.1016/0042-6822(57)90022-3. [DOI] [PubMed] [Google Scholar]
- Katzir N., Oppenheim A., Belfort M., Oppenheim A. B. Activation of the lambda int gene by the cii and ciii gene products. Virology. 1976 Oct 15;74(2):324–331. doi: 10.1016/0042-6822(76)90339-1. [DOI] [PubMed] [Google Scholar]
- Kotewicz M., Chung S., Takeda Y., Echols H. Characterization of the integration protein of bacteriophage lambda as a site-specific DNA-binding protein. Proc Natl Acad Sci U S A. 1977 Apr;74(4):1511–1515. doi: 10.1073/pnas.74.4.1511. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liedke-Kulke M., Kaiser A. D. The c-region of coliphage 21. Virology. 1967 Jul;32(3):475–481. doi: 10.1016/0042-6822(67)90299-1. [DOI] [PubMed] [Google Scholar]
- McMacken R., Mantei N., Butler B., Joyner A., Echols H. Effect of mutations in the c2 and c3 genes of bacteriophage lambda on macromolecular synthesis in infected cells. J Mol Biol. 1970 May 14;49(3):639–655. doi: 10.1016/0022-2836(70)90288-3. [DOI] [PubMed] [Google Scholar]
- Oppenheim A. B., Kapeller I. Analysis of a temperature sensitive mutation in gene cII of bacteriophage lambda. Mol Gen Genet. 1976 Nov 24;149(1):121–123. doi: 10.1007/BF00275967. [DOI] [PubMed] [Google Scholar]
- Ptashne M., Backman K., Humayun M. Z., Jeffrey A., Maurer R., Meyer B., Sauer R. T. Autoregulation and function of a repressor in bacteriophage lambda. Science. 1976 Oct 8;194(4261):156–161. doi: 10.1126/science.959843. [DOI] [PubMed] [Google Scholar]
- Ptashne M. ISOLATION OF THE lambda PHAGE REPRESSOR. Proc Natl Acad Sci U S A. 1967 Feb;57(2):306–313. doi: 10.1073/pnas.57.2.306. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Reichardt L. F. Control of bacteriophage lambda repressor synthesis after phage infection: the role of the N, cII, cIII and cro products. J Mol Biol. 1975 Apr 5;93(2):267–288. doi: 10.1016/0022-2836(75)90132-1. [DOI] [PubMed] [Google Scholar]
- Reichardt L. F. Control of bacteriophage lambda repressor synthesis: regulation of the maintenance pathway of the cro and cI products. J Mol Biol. 1975 Apr 5;93(2):289–309. doi: 10.1016/0022-2836(75)90133-3. [DOI] [PubMed] [Google Scholar]
- Reichardt L., Kaiser A. D. Control of lambda repressor synthesis. Proc Natl Acad Sci U S A. 1971 Sep;68(9):2185–2189. doi: 10.1073/pnas.68.9.2185. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Schwarz E., Scherer G., Hobom G., Kössel H. Nucleotide sequence of cro, cII and part of the O gene in phage lambda DNA. Nature. 1978 Mar 30;272(5652):410–414. doi: 10.1038/272410a0. [DOI] [PubMed] [Google Scholar]
- Takeda Y., Folkmanis A., Echols H. Cro regulatory protein specified by bacteriophage lambda. Structure, DNA-binding, and repression of RNA synthesis. J Biol Chem. 1977 Sep 10;252(17):6177–6183. [PubMed] [Google Scholar]