Table 3.
Genotype Distrisbution and Hardy Weinberg Equilibrium (HWE) Analysis for all SNPs
| Gene | SNP | Genotype categories | Genotype counts (%) | HWE P1 |
|---|---|---|---|---|
| ABCA1 | rs1800977 | CC | 163 (45.3) | 0.27 |
| CT | 166 (46.1) | |||
| TT | 31 (8.6) | |||
| LPL | rs328 | SX | 69 (19.2) | 0.06 |
| SS | 291 (80.8) | |||
| CETP | rs708272 | B1B1 | 108 (30.0) | 0.60 |
| B1B2 | 174 (48.3) | |||
| B2B2 | 78 (21.7) | |||
| LIPC | rs1800588 | CC | 244 (67.8) | 1.00 |
| CT | 105 (29.2) | |||
| TT | 11 (3.1) | |||
| SHBG | rs1799941 | AA | 8 (2.2) | 1.00 |
| AG | 93 (25.8) | |||
| GG | 259 (71.9) | |||
| rs6257 | CC | 4 (1.1) | 0.01 | |
| CT | 119 (33.1) | |||
| TT | 237 (65.8) |
Analyses were performed in all subjects (male and female combined).
1
Hardy Weinberg Equilibrium test p value is presented.