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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 Oct 5;69(Pt 11):o1610. doi: 10.1107/S1600536813026871

Ethyl (2E)-2-cyano-3-(4-meth­oxy­phen­yl)acrylate

P A Suchetan a, B S Palakshamurthy b, N R Mohan c, S Madan Kumar d, N K Lokanath d, S Sreenivasa c,*
PMCID: PMC3884285  PMID: 24454061

Abstract

In the title compound, C13H13NO3, the conformation across the C=C bond is synperiplanar, the torsion angle of the segment C(ring)—C=C—C(N) being 3.2 (5)°. In the crystal, mol­ecules are linked into inversion dimers, arranged in a zigzag pattern, through two C—H⋯O inter­actions generating R 2 2(10) and R 2 2(14) motifs. These dimers are arranged in a zigzag pattern in the crystal structure. The mol­ecules are further linked along the c axis through weak C—H⋯π inter­actions, and weak π⋯π inter­actions [centroid–centroid separation = 3.9986 (17) Å] are also observed.

Related literature  

For use of the title compound in the synthesis of prop-2-enoyl­amides, see: Santos et al.. (2004). For use of the title compound in the synthesis of prop-2-enoates, see: Sousa et al. (2006). For hydrogen-bond motifs, see: Bernstein et al. (1995).graphic file with name e-69-o1610-scheme1.jpg

Experimental  

Crystal data  

  • C13H13NO3

  • M r = 231.24

  • Monoclinic, Inline graphic

  • a = 8.4889 (12) Å

  • b = 8.3552 (16) Å

  • c = 17.143 (3) Å

  • β = 91.294 (11)°

  • V = 1215.6 (3) Å3

  • Z = 4

  • Cu Kα radiation

  • μ = 0.74 mm−1

  • T = 296 K

  • 0.40 × 0.33 × 0.27 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • 4798 measured reflections

  • 1937 independent reflections

  • 1354 reflections with I > 2σ(I)

  • R int = 0.069

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.067

  • wR(F 2) = 0.201

  • S = 1.02

  • 1937 reflections

  • 156 parameters

  • H-atom parameters constrained

  • Δρmax = 0.18 e Å−3

  • Δρmin = −0.25 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: APEX2 and SAINT-Plus (Bruker, 2009); data reduction: SAINT-Plus and XPREP; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536813026871/sj5355sup1.cif

e-69-o1610-sup1.cif (20.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813026871/sj5355Isup2.hkl

e-69-o1610-Isup2.hkl (93.4KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813026871/sj5355Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg is the centroid of the C1–C6 benzene ring.

D—H⋯A D—H H⋯A DA D—H⋯A
C3—H3⋯O2i 0.93 2.54 3.414 (3) 157
C8—H8⋯O2i 0.93 2.59 3.475 (3) 159
C12—H12ACg ii 0.97 2.90 3.803 (3) 156

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors acknowledge the IOE X-ray diffractometer Facility, University of Mysore, Mysore, for the data collection.

supplementary crystallographic information

1. Comment

Ethyl (2E)-2-cyano-3-(4-methoxyphenyl)acrylate is an important starting material for the synthesis of biologically and pharmacologically important 2-propenoylamides (Santos et al.., 2004) and 2-propenoates (Sousa et al., 2006). Keeping this in mind, the title compound was synthesized.

In the title compound, C13H13NO3, the conformation across the C=C bond is syn-periplanar (Fig.1), the C4—C8—C9—C10 torsion angle being 3.2 (5)°. The molecules are linked into inversion dimers (Fig.2) through C3—H3···O2 and C8—H8···O2 interactions, generating R22(10) and R22(14) ring motifs (Bernstein et al., 1995). These dimers are arranged in a zigzag pattern in the crystal structure (Fig.3). The molecules are further linked along the c axis through weak C12—H12A···Cg interactions (Fig.4), and weak Cg···Cg interactions (centroid···centroid separation = 3.9986 (17) Å) are also observed (Fig.5).

2. Experimental

A mixture of tetra-n-butylammonium bromide (TBAB) (3.47 g, 10 mmol), palladium acetate (0.060 g, 0.27 mmol), triphenylphosphine (2.97 g, 11 mmol), 1-bromo-4-methoxybenzene (1 g, 5.4 mmol) and potassium carbonate (1.12 g, 8.1 mmol) were dissolved in 10 ml of DMF in a three-necked round bottom flask and the reaction mixture was heated to 120 °C under nitrogen atmosphere with constant stirring for 10–15 minutes until a yellowish brown solution was obtained. Ethyl-2-cyanoacrylate (0.81 g, 6.4 mmol) was added to the solution and the reaction mixture was heated to 120 °C for 10 h, cooled and filtered under vacuum to obtain the crude compound. This was further purified by column chromatography using petroleum ether: ethyl acetate (7:3) as eluent (Rf value = 0.69), to yield pale green colored crystals.

3. Refinement

The H atoms were positioned with idealized geometry using a riding model with C—H = 0.93–0.97 Å. All H atoms were refined with isotropic displacement parameters (set to 1.2–1.5 times Ueq of the parent atom).

Figures

Fig. 1.

Fig. 1.

Molecular structure of the title compound, showing the atom-labeling scheme. Displacement ellipsoids are drawn at the 50% probability level.

Fig. 2.

Fig. 2.

Molecular packing in the title compound displaying R22(10) and R22(14)rings chains. H atoms not involved in H-bonding are omitted for clarity.

Fig. 3.

Fig. 3.

The zigzag pattern of inversion dimers viewed along a.

Fig. 4.

Fig. 4.

Linking of molecules along the c axis through C—H···Cg interactions.

Fig. 5.

Fig. 5.

π-π stacking interactions observed in the crystal structure. H atoms are omitted for clarity.

Crystal data

C13H13NO3 Prism
Mr = 231.24 Dx = 1.264 Mg m3
Monoclinic, P21/n Melting point: 401 K
Hall symbol: -P 2yn Cu Kα radiation, λ = 1.54178 Å
a = 8.4889 (12) Å Cell parameters from 776 reflections
b = 8.3552 (16) Å θ = 5.2–64.3°
c = 17.143 (3) Å µ = 0.74 mm1
β = 91.294 (11)° T = 296 K
V = 1215.6 (3) Å3 Prism, green
Z = 4 0.40 × 0.33 × 0.27 mm
F(000) = 488

Data collection

Bruker APEXII CCD diffractometer 1354 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.069
Graphite monochromator θmax = 64.3°, θmin = 5.2°
Detector resolution: 1 pixels mm-1 h = −9→3
φ and ω scans k = −9→9
4798 measured reflections l = −19→19
1937 independent reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.067 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.201 H-atom parameters constrained
S = 1.02 w = 1/[σ2(Fo2) + (0.124P)2] where P = (Fo2 + 2Fc2)/3
1937 reflections (Δ/σ)max = 0.012
156 parameters Δρmax = 0.18 e Å3
0 restraints Δρmin = −0.25 e Å3

Special details

Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 1.1331 (3) 0.3418 (3) 0.46205 (14) 0.0559 (7)
C2 1.0569 (3) 0.2415 (4) 0.51365 (14) 0.0599 (7)
H2 1.1067 0.2089 0.5599 0.072*
C3 0.9066 (3) 0.1912 (4) 0.49517 (14) 0.0597 (7)
H3 0.8547 0.1266 0.5305 0.072*
C4 0.8284 (3) 0.2330 (3) 0.42574 (13) 0.0510 (7)
C5 0.9065 (3) 0.3398 (4) 0.37625 (14) 0.0593 (7)
H5 0.8566 0.3743 0.3304 0.071*
C6 1.0549 (3) 0.3931 (4) 0.39481 (14) 0.0621 (7)
H6 1.1040 0.4650 0.3618 0.074*
C7 1.3670 (3) 0.3435 (5) 0.54148 (17) 0.0817 (10)
H7A 1.3118 0.3761 0.5871 0.122*
H7B 1.4705 0.3899 0.5425 0.122*
H7C 1.3756 0.2289 0.5407 0.122*
C8 0.6735 (3) 0.1658 (3) 0.41146 (14) 0.0550 (7)
H8 0.6320 0.1138 0.4543 0.066*
C9 0.5784 (3) 0.1645 (3) 0.34770 (14) 0.0540 (7)
C10 0.6207 (3) 0.2301 (4) 0.27376 (14) 0.0639 (8)
C11 0.4219 (3) 0.0864 (4) 0.35228 (14) 0.0577 (7)
C12 0.1752 (3) 0.0439 (4) 0.28684 (17) 0.0698 (8)
H12A 0.1221 0.0730 0.3343 0.084*
H12B 0.1790 −0.0720 0.2835 0.084*
C13 0.0891 (3) 0.1113 (5) 0.21740 (18) 0.0856 (11)
H13A 0.0878 0.2259 0.2209 0.128*
H13B −0.0171 0.0717 0.2159 0.128*
H13C 0.1413 0.0795 0.1708 0.128*
N1 0.6549 (3) 0.2803 (5) 0.21466 (14) 0.0962 (11)
O1 1.2826 (2) 0.3962 (3) 0.47346 (11) 0.0737 (7)
O2 0.3775 (2) 0.0120 (3) 0.40764 (12) 0.0812 (7)
O3 0.33402 (18) 0.1098 (3) 0.28756 (9) 0.0649 (6)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0466 (14) 0.0676 (18) 0.0535 (13) −0.0088 (12) 0.0015 (10) −0.0033 (12)
C2 0.0525 (14) 0.078 (2) 0.0488 (13) −0.0068 (13) −0.0061 (10) 0.0058 (12)
C3 0.0525 (14) 0.0777 (19) 0.0489 (13) −0.0081 (13) −0.0002 (10) 0.0077 (12)
C4 0.0431 (13) 0.0640 (16) 0.0458 (12) −0.0001 (11) 0.0003 (9) −0.0013 (11)
C5 0.0536 (15) 0.0757 (19) 0.0486 (13) −0.0014 (13) −0.0028 (10) 0.0082 (12)
C6 0.0575 (15) 0.077 (2) 0.0520 (13) −0.0105 (14) 0.0036 (11) 0.0077 (13)
C7 0.0549 (16) 0.118 (3) 0.0713 (18) −0.0178 (17) −0.0162 (13) 0.0095 (17)
C8 0.0470 (13) 0.0680 (18) 0.0501 (13) 0.0007 (12) 0.0017 (10) 0.0037 (11)
C9 0.0402 (13) 0.0707 (17) 0.0512 (13) 0.0026 (11) 0.0027 (10) −0.0018 (11)
C10 0.0443 (13) 0.099 (2) 0.0477 (14) 0.0013 (14) −0.0023 (10) −0.0015 (14)
C11 0.0454 (13) 0.0742 (19) 0.0534 (13) 0.0030 (12) −0.0029 (11) −0.0020 (13)
C12 0.0458 (15) 0.079 (2) 0.0841 (18) −0.0014 (13) −0.0088 (13) −0.0056 (15)
C13 0.0530 (16) 0.128 (3) 0.0748 (19) 0.0064 (17) −0.0112 (13) −0.0004 (19)
N1 0.0689 (16) 0.167 (3) 0.0526 (14) −0.0126 (17) 0.0023 (11) 0.0125 (16)
O1 0.0546 (11) 0.0997 (17) 0.0665 (11) −0.0192 (10) −0.0074 (8) 0.0085 (11)
O2 0.0605 (12) 0.1123 (19) 0.0705 (12) −0.0192 (11) −0.0087 (9) 0.0250 (12)
O3 0.0449 (10) 0.0925 (16) 0.0570 (10) −0.0033 (9) −0.0067 (8) 0.0006 (9)

Geometric parameters (Å, º)

C1—O1 1.358 (3) C7—H7C 0.9600
C1—C6 1.385 (4) C8—C9 1.344 (3)
C1—C2 1.389 (4) C8—H8 0.9300
C2—C3 1.374 (3) C9—C10 1.434 (4)
C2—H2 0.9300 C9—C11 1.483 (4)
C3—C4 1.394 (3) C10—N1 1.140 (3)
C3—H3 0.9300 C11—O2 1.203 (3)
C4—C5 1.407 (4) C11—O3 1.337 (3)
C4—C8 1.446 (3) C12—O3 1.456 (3)
C5—C6 1.367 (4) C12—C13 1.493 (4)
C5—H5 0.9300 C12—H12A 0.9700
C6—H6 0.9300 C12—H12B 0.9700
C7—O1 1.425 (3) C13—H13A 0.9600
C7—H7A 0.9600 C13—H13B 0.9600
C7—H7B 0.9600 C13—H13C 0.9600
O1—C1—C6 116.4 (2) C9—C8—C4 131.9 (2)
O1—C1—C2 123.9 (2) C9—C8—H8 114.0
C6—C1—C2 119.7 (2) C4—C8—H8 114.0
C3—C2—C1 118.8 (2) C8—C9—C10 123.9 (2)
C3—C2—H2 120.6 C8—C9—C11 118.9 (2)
C1—C2—H2 120.6 C10—C9—C11 117.2 (2)
C2—C3—C4 122.8 (2) N1—C10—C9 179.1 (4)
C2—C3—H3 118.6 O2—C11—O3 123.4 (2)
C4—C3—H3 118.6 O2—C11—C9 124.5 (2)
C3—C4—C5 116.9 (2) O3—C11—C9 112.1 (2)
C3—C4—C8 117.4 (2) O3—C12—C13 107.5 (3)
C5—C4—C8 125.7 (2) O3—C12—H12A 110.2
C6—C5—C4 120.7 (2) C13—C12—H12A 110.2
C6—C5—H5 119.6 O3—C12—H12B 110.2
C4—C5—H5 119.6 C13—C12—H12B 110.2
C5—C6—C1 121.0 (2) H12A—C12—H12B 108.5
C5—C6—H6 119.5 C12—C13—H13A 109.5
C1—C6—H6 119.5 C12—C13—H13B 109.5
O1—C7—H7A 109.5 H13A—C13—H13B 109.5
O1—C7—H7B 109.5 C12—C13—H13C 109.5
H7A—C7—H7B 109.5 H13A—C13—H13C 109.5
O1—C7—H7C 109.5 H13B—C13—H13C 109.5
H7A—C7—H7C 109.5 C1—O1—C7 117.7 (2)
H7B—C7—H7C 109.5 C11—O3—C12 116.8 (2)
O1—C1—C2—C3 −178.6 (3) C4—C8—C9—C10 3.2 (5)
C6—C1—C2—C3 2.1 (4) C4—C8—C9—C11 −178.8 (3)
C1—C2—C3—C4 1.8 (4) C8—C9—C11—O2 −6.2 (5)
C2—C3—C4—C5 −4.2 (4) C10—C9—C11—O2 171.9 (3)
C2—C3—C4—C8 176.9 (2) C8—C9—C11—O3 173.1 (2)
C3—C4—C5—C6 2.8 (4) C10—C9—C11—O3 −8.8 (4)
C8—C4—C5—C6 −178.5 (3) C6—C1—O1—C7 −179.0 (3)
C4—C5—C6—C1 1.0 (4) C2—C1—O1—C7 1.7 (4)
O1—C1—C6—C5 177.2 (3) O2—C11—O3—C12 1.7 (4)
C2—C1—C6—C5 −3.5 (4) C9—C11—O3—C12 −177.6 (2)
C3—C4—C8—C9 −169.8 (3) C13—C12—O3—C11 168.8 (3)
C5—C4—C8—C9 11.4 (5)

Hydrogen-bond geometry (Å, º)

Cg is the centroid of the C1···C6 benzene ring.

D—H···A D—H H···A D···A D—H···A
C3—H3···O2i 0.93 2.54 3.414 (3) 157
C8—H8···O2i 0.93 2.59 3.475 (3) 159
C12—H12A···Cgii 0.97 2.90 3.803 (3) 156

Symmetry codes: (i) −x+1, −y, −z+1; (ii) x+1, y, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SJ5355).

References

  1. Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573.
  2. Bruker (2009). APEX2, SAINT-Plus and XPREP Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470.
  4. Santos, S. A., Pereira, N., Da Silva, I. M., Sarquis, M. I. M. & Antunes, O. A. C. (2004). Process Biochem. 39, 2269–2275.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Sousa, J. B., Calheiros, R., Rio, V., Borges, F. & Marques, M. P. M. (2006). J. Mol. Struct. 783, 122–128.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536813026871/sj5355sup1.cif

e-69-o1610-sup1.cif (20.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813026871/sj5355Isup2.hkl

e-69-o1610-Isup2.hkl (93.4KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813026871/sj5355Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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