Abstract
In the title compound, [Mg(C3H3N2)4(H2O)2]Cl2, the MgII cation lies on a crystallographic inversion centre and is coordinated by two water molecules and four N-atom donors from monodentate imidazole ligands, giving a slightly distorted octahedral stereochemistry. In the crystal, water O—H⋯Cl and imidazole N—H⋯Cl hydrogen bonds give rise to a three-dimensional structure.
Related literature
For a similar structure, see: Reiss et al. (2011 ▶).
Experimental
Crystal data
[Mg(C3H3N2)4(H2O)2]Cl2
M r = 403.57
Monoclinic,
a = 12.3826 (6) Å
b = 11.0048 (4) Å
c = 14.4485 (6) Å
β = 107.037 (1)°
V = 1882.47 (14) Å3
Z = 4
Mo Kα radiation
μ = 0.40 mm−1
T = 296 K
0.30 × 0.25 × 0.20 mm
Data collection
Bruker Kappa APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 1999 ▶) T min = 0.889, T max = 0.924
8496 measured reflections
1854 independent reflections
1695 reflections with I > 2σ(I)
R int = 0.026
Refinement
R[F 2 > 2σ(F 2)] = 0.025
wR(F 2) = 0.068
S = 1.05
1854 reflections
132 parameters
4 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.17 e Å−3
Δρmin = −0.25 e Å−3
Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813021478/zs2271sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813021478/zs2271Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Selected bond lengths (Å).
| Mg1—N1 | 2.2281 (10) |
| Mg1—N3 | 2.1611 (10) |
| Mg1—O1 | 2.0923 (9) |
Table 2. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1—H1W⋯Cl1i | 0.84 (1) | 2.30 (1) | 3.1361 (9) | 172 (2) |
| O1—H2W⋯Cl1 | 0.84 (1) | 2.30 (1) | 3.1337 (10) | 176 (2) |
| N2—H2A⋯Cl1ii | 0.89 (1) | 2.47 (1) | 3.3165 (12) | 160 (2) |
| N4—H4A⋯Cl1iii | 0.89 (1) | 2.43 (1) | 3.2585 (13) | 155 (2) |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
The authors thank the Sophisticated Analytical Instrument Facility, IIT-Madras, Chennai, for the data collection.
supplementary crystallographic information
1. Comment
In the title compound, [Mg(C3H3N2)4(H2O)2] . 2Cl, the MgII cation lies on a crystallographic inversion centre and is coordinated by two water molecules and four N-atom donors from monodentate imidazole ligands, (Fig. 1), giving a slightly distorted octahedral geometry (Table 1). In the crystal, O—H···Cl and N—H···Cl hydrogen bonds between both the aqua ligands and the imidazole ligands and the chloride counter-anions (Table 2) generate a three-dimensional structure (Fig. 2). These water–chloride hydrogen-bonding interactions are in the typical range as observed in the redetermined structure of diaquatetrakis(dimethylformamide-κO)magnesium dichloride (Reiss et al., 2011).
2. Experimental
A solution of MgCl2 (0.2 mmol) in water (6 ml) was added dropwise to a solution of imidazole (0.8 mmol) in ethanol. After stirring for 30 min, the mixture was filtered. Crystals suitable for X-ray analysis were obtained by evaporating the filtrate at room temperature (yield 56%).
3. Refinement
Carbon-bound H atoms were placed at calculated positions and treated as riding on the parent atom, with, C—H = 0.93 Å and with Uiso(H) = 1.2Ueq(C). The O-bound and N-bound H atoms were located in a difference Fourier map and refined freely.
Figures
Fig. 1.
The molecular structure of the title compound showing atom numbering, with displacement ellipsoids drawn at the 40% probability level. For symmetry code (i): -x + 1/2, -y + 3/2, -z + 1.
Fig. 2.
Crystal packing of the title compound viewed along the c axis. Dashed lines indicate hydrogen bonds. H atoms not involved in hydrogen bonding have been omitted for clarity.
Crystal data
| [Mg(C3H4N2)4(H2O)2]Cl2 | F(000) = 840 |
| Mr = 403.57 | Dx = 1.424 Mg m−3 |
| Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -C 2yc | Cell parameters from 8496 reflections |
| a = 12.3826 (6) Å | θ = 2.1–26.0° |
| b = 11.0048 (4) Å | µ = 0.40 mm−1 |
| c = 14.4485 (6) Å | T = 296 K |
| β = 107.037 (1)° | Block, colourless |
| V = 1882.47 (14) Å3 | 0.30 × 0.25 × 0.20 mm |
| Z = 4 |
Data collection
| Bruker Kappa APEXII CCD diffractometer | 1854 independent reflections |
| Radiation source: fine-focus sealed tube | 1695 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.026 |
| ω and φ scan | θmax = 26.0°, θmin = 2.5° |
| Absorption correction: multi-scan (SADABS; Bruker, 1999) | h = −15→14 |
| Tmin = 0.889, Tmax = 0.924 | k = −13→13 |
| 8496 measured reflections | l = −17→16 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.025 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.068 | w = 1/[σ2(Fo2) + (0.0327P)2 + 1.0653P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.05 | (Δ/σ)max < 0.001 |
| 1854 reflections | Δρmax = 0.17 e Å−3 |
| 132 parameters | Δρmin = −0.25 e Å−3 |
| 4 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0093 (6) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.29321 (12) | 0.73665 (13) | 0.29376 (10) | 0.0376 (3) | |
| H1 | 0.3423 | 0.6718 | 0.3154 | 0.045* | |
| C2 | 0.19291 (13) | 0.87405 (14) | 0.19885 (10) | 0.0440 (4) | |
| H2 | 0.1594 | 0.9221 | 0.1451 | 0.053* | |
| C3 | 0.17954 (11) | 0.88354 (12) | 0.28794 (9) | 0.0366 (3) | |
| H3 | 0.1340 | 0.9406 | 0.3059 | 0.044* | |
| C4 | 0.01955 (12) | 0.63009 (13) | 0.37687 (10) | 0.0393 (3) | |
| H4 | −0.0098 | 0.7052 | 0.3525 | 0.047* | |
| C5 | −0.03394 (12) | 0.52348 (14) | 0.35343 (11) | 0.0462 (4) | |
| H5 | −0.1058 | 0.5111 | 0.3112 | 0.055* | |
| C6 | 0.13086 (11) | 0.49423 (12) | 0.45568 (11) | 0.0385 (3) | |
| H6 | 0.1931 | 0.4549 | 0.4967 | 0.046* | |
| N1 | 0.24289 (8) | 0.79672 (9) | 0.34828 (7) | 0.0298 (2) | |
| N2 | 0.26524 (11) | 0.78024 (12) | 0.20364 (8) | 0.0434 (3) | |
| N3 | 0.12407 (9) | 0.61208 (9) | 0.44212 (7) | 0.0298 (2) | |
| N4 | 0.03796 (11) | 0.43755 (11) | 0.40368 (10) | 0.0429 (3) | |
| O1 | 0.37963 (8) | 0.62540 (8) | 0.50646 (7) | 0.0355 (2) | |
| Mg1 | 0.2500 | 0.7500 | 0.5000 | 0.02385 (15) | |
| Cl1 | 0.41012 (3) | 0.35283 (3) | 0.57173 (3) | 0.04135 (14) | |
| H1W | 0.4370 (11) | 0.6384 (16) | 0.4884 (12) | 0.057 (5)* | |
| H2A | 0.2880 (16) | 0.7492 (16) | 0.1556 (10) | 0.069 (6)* | |
| H2W | 0.3849 (15) | 0.5529 (10) | 0.5253 (12) | 0.056 (5)* | |
| H4A | 0.0289 (15) | 0.3576 (9) | 0.4011 (13) | 0.058 (5)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0447 (7) | 0.0340 (7) | 0.0385 (7) | 0.0014 (6) | 0.0188 (6) | −0.0019 (6) |
| C2 | 0.0528 (8) | 0.0486 (9) | 0.0284 (7) | −0.0021 (7) | 0.0084 (6) | 0.0050 (6) |
| C3 | 0.0413 (7) | 0.0359 (7) | 0.0336 (7) | 0.0034 (6) | 0.0125 (6) | 0.0017 (6) |
| C4 | 0.0389 (7) | 0.0341 (7) | 0.0413 (8) | −0.0016 (6) | 0.0062 (6) | 0.0048 (6) |
| C5 | 0.0416 (7) | 0.0472 (9) | 0.0460 (8) | −0.0129 (7) | 0.0071 (6) | −0.0033 (7) |
| C6 | 0.0357 (7) | 0.0278 (7) | 0.0535 (8) | 0.0005 (5) | 0.0157 (6) | 0.0041 (6) |
| N1 | 0.0356 (5) | 0.0277 (5) | 0.0288 (5) | −0.0026 (4) | 0.0138 (4) | −0.0002 (4) |
| N2 | 0.0558 (7) | 0.0484 (7) | 0.0325 (6) | −0.0074 (6) | 0.0233 (5) | −0.0088 (5) |
| N3 | 0.0326 (5) | 0.0251 (5) | 0.0337 (6) | −0.0023 (4) | 0.0130 (4) | 0.0007 (4) |
| N4 | 0.0485 (7) | 0.0261 (6) | 0.0594 (8) | −0.0110 (5) | 0.0244 (6) | −0.0065 (5) |
| O1 | 0.0360 (5) | 0.0257 (5) | 0.0523 (6) | 0.0056 (4) | 0.0248 (4) | 0.0073 (4) |
| Mg1 | 0.0275 (3) | 0.0196 (3) | 0.0275 (3) | −0.0003 (2) | 0.0126 (2) | 0.0008 (2) |
| Cl1 | 0.0432 (2) | 0.0314 (2) | 0.0584 (2) | 0.00885 (13) | 0.02879 (17) | 0.01331 (14) |
Geometric parameters (Å, º)
| C1—N1 | 1.3166 (16) | C6—N3 | 1.3107 (17) |
| C1—N2 | 1.3347 (18) | C6—N4 | 1.3306 (19) |
| C1—H1 | 0.9300 | C6—H6 | 0.9300 |
| C2—C3 | 1.3491 (19) | Mg1—N1 | 2.2281 (10) |
| C2—N2 | 1.355 (2) | N2—H2A | 0.890 (9) |
| C2—H2 | 0.9300 | Mg1—N3 | 2.1611 (10) |
| C3—N1 | 1.3738 (17) | N4—H4A | 0.887 (9) |
| C3—H3 | 0.9300 | Mg1—O1 | 2.0923 (9) |
| C4—C5 | 1.341 (2) | O1—H1W | 0.838 (9) |
| C4—N3 | 1.3741 (17) | O1—H2W | 0.839 (9) |
| C4—H4 | 0.9300 | Mg1—O1i | 2.0923 (9) |
| C5—N4 | 1.355 (2) | Mg1—N3i | 2.1612 (10) |
| C5—H5 | 0.9300 | Mg1—N1i | 2.2281 (10) |
| N1—C1—N2 | 111.72 (13) | C6—N3—C4 | 104.57 (11) |
| N1—C1—H1 | 124.1 | C6—N3—Mg1 | 129.03 (9) |
| N2—C1—H1 | 124.1 | C4—N3—Mg1 | 126.30 (9) |
| C3—C2—N2 | 105.92 (12) | C6—N4—C5 | 107.41 (12) |
| C3—C2—H2 | 127.0 | C6—N4—H4A | 124.5 (12) |
| N2—C2—H2 | 127.0 | C5—N4—H4A | 128.0 (12) |
| C2—C3—N1 | 110.17 (12) | Mg1—O1—H1W | 125.7 (12) |
| C2—C3—H3 | 124.9 | Mg1—O1—H2W | 128.6 (12) |
| N1—C3—H3 | 124.9 | H1W—O1—H2W | 105.6 (17) |
| C5—C4—N3 | 110.08 (13) | O1i—Mg1—O1 | 179.999 (1) |
| C5—C4—H4 | 125.0 | O1i—Mg1—N3 | 89.19 (4) |
| N3—C4—H4 | 125.0 | O1—Mg1—N3 | 90.81 (4) |
| C4—C5—N4 | 106.08 (12) | O1i—Mg1—N3i | 90.81 (4) |
| C4—C5—H5 | 127.0 | O1—Mg1—N3i | 89.19 (4) |
| N4—C5—H5 | 127.0 | N3—Mg1—N3i | 180.0 |
| N3—C6—N4 | 111.86 (13) | O1i—Mg1—N1i | 90.22 (4) |
| N3—C6—H6 | 124.1 | O1—Mg1—N1i | 89.78 (4) |
| N4—C6—H6 | 124.1 | N3—Mg1—N1i | 91.99 (4) |
| C1—N1—C3 | 104.59 (11) | N3i—Mg1—N1i | 88.01 (4) |
| C1—N1—Mg1 | 125.70 (9) | O1i—Mg1—N1 | 89.78 (4) |
| C3—N1—Mg1 | 129.45 (8) | O1—Mg1—N1 | 90.22 (4) |
| C1—N2—C2 | 107.60 (12) | N3—Mg1—N1 | 88.01 (4) |
| C1—N2—H2A | 124.8 (12) | N3i—Mg1—N1 | 91.99 (4) |
| C2—N2—H2A | 127.5 (12) | N1i—Mg1—N1 | 180.0 |
| N2—C2—C3—N1 | 0.07 (16) | C4—N3—Mg1—O1i | 33.40 (11) |
| N3—C4—C5—N4 | −0.57 (17) | C6—N3—Mg1—O1 | 29.08 (12) |
| N2—C1—N1—C3 | −0.09 (15) | C4—N3—Mg1—O1 | −146.60 (11) |
| N2—C1—N1—Mg1 | 174.52 (9) | C6—N3—Mg1—N1i | −60.73 (12) |
| C2—C3—N1—C1 | 0.01 (15) | C4—N3—Mg1—N1i | 123.59 (11) |
| C2—C3—N1—Mg1 | −174.32 (9) | C6—N3—Mg1—N1 | 119.27 (12) |
| N1—C1—N2—C2 | 0.13 (17) | C4—N3—Mg1—N1 | −56.41 (11) |
| C3—C2—N2—C1 | −0.12 (16) | C1—N1—Mg1—O1i | −168.58 (11) |
| N4—C6—N3—C4 | −0.12 (16) | C3—N1—Mg1—O1i | 4.66 (11) |
| N4—C6—N3—Mg1 | −176.52 (9) | C1—N1—Mg1—O1 | 11.42 (11) |
| C5—C4—N3—C6 | 0.43 (16) | C3—N1—Mg1—O1 | −175.34 (11) |
| C5—C4—N3—Mg1 | 176.96 (10) | C1—N1—Mg1—N3 | −79.38 (11) |
| N3—C6—N4—C5 | −0.23 (17) | C3—N1—Mg1—N3 | 93.85 (11) |
| C4—C5—N4—C6 | 0.48 (17) | C1—N1—Mg1—N3i | 100.62 (11) |
| C6—N3—Mg1—O1i | −150.92 (12) | C3—N1—Mg1—N3i | −86.14 (11) |
Symmetry code: (i) −x+1/2, −y+3/2, −z+1.
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1W···Cl1ii | 0.84 (1) | 2.30 (1) | 3.1361 (9) | 172 (2) |
| O1—H2W···Cl1 | 0.84 (1) | 2.30 (1) | 3.1337 (10) | 176 (2) |
| N2—H2A···Cl1iii | 0.89 (1) | 2.47 (1) | 3.3165 (12) | 160 (2) |
| N4—H4A···Cl1iv | 0.89 (1) | 2.43 (1) | 3.2585 (13) | 155 (2) |
Symmetry codes: (ii) −x+1, −y+1, −z+1; (iii) x, −y+1, z−1/2; (iv) −x+1/2, −y+1/2, −z+1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZS2271).
References
- Bruker (1999). SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
- Bruker (2004). APEX2, SAINT and XPREP Bruker AXS Inc., Madison, Wisconsin, USA.
- Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
- Reiss, G. J., Boldog, I. & Janiak, C. (2011). Acta Cryst. E67, m1109–m1110. [DOI] [PMC free article] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813021478/zs2271sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813021478/zs2271Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


