Abstract
In the title sulfonamide derivative, C11H10ClN3O2S, the dihedral angle between the pyridine rings is 46.85 (12)°. The N atom of the chloropyridine ring is anti to the N—H bond. In the crystal, molecules are linked through N—H⋯N hydrogen bonds into zigzag chains parallel to [001] with a C(7) graph-set motif.
Related literature
For graph-set analysis of hydrogen-bond patterns, see: Bernstein et al. (1995 ▶). For the antimicrobial activity of related compounds, see: Desai et al. (2013 ▶); Mohan et al. (2013 ▶). For the proliferation activity of these compounds, see: Renu et al. (2006 ▶), and for their tuberculostaic acitivity, see: Gobis et al. (2013 ▶).
Experimental
Crystal data
C11H10ClN3O2S
M r = 283.73
Monoclinic,
a = 5.4140 (6) Å
b = 18.172 (2) Å
c = 12.9392 (15) Å
β = 92.388 (6)°
V = 1271.9 (2) Å3
Z = 4
Mo Kα radiation
μ = 0.46 mm−1
T = 293 K
0.35 × 0.29 × 0.23 mm
Data collection
Bruker APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.852, T max = 0.899
20929 measured reflections
2961 independent reflections
2185 reflections with I > 2σ(I)
R int = 0.035
Refinement
R[F 2 > 2σ(F 2)] = 0.044
wR(F 2) = 0.137
S = 0.82
2961 reflections
167 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.27 e Å−3
Δρmin = −0.39 e Å−3
Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT-Plus (Bruker, 2009 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536813030523/wm2782sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813030523/wm2782Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536813030523/wm2782Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N2—HN2⋯N3i | 0.78 (3) | 2.10 (3) | 2.870 (3) | 174.53 |
Symmetry code: (i)
.
Acknowledgments
The authors thank Prof T. N. Guru Row, Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore, for his help and valuable suggestions.
supplementary crystallographic information
1. Comment
Pyridine ring containing sulfonamide moieties show antimicrobial activity (Desai et al., 2013; Mohan et al., 2013), proliferation activity (Renu et al., 2006) and tuberculostaic acitivity (Gobis et al., 2013). Keeping this in mind, the title compound, C11H10ClN3O2S, (I), was synthesized and its crystal structure determined.
In the structure of compound (I) the dihedral angle between the two pyridine rings is 46.85(12°. The N-atom of the chloropyridine ring in the compound is anti to the N—H bond (Fig 1). In the crystal structure, the molecules are linked through N2—HN2···N3 hydrogen bonds (Table 1, Fig. 2) into zigzag chains with graph-set notation C(7) (Bernstein et al. 1995) running parallel to [001] .
2. Experimental
Pyridin-4-ylmethanamine (7.4 mmol) was taken in dry dichloromethane (10 ml) and cooled to 273 K. To this solution 6-chloropyridine-3-sulfonyl chloride (7.4 mmol) in dichloromethane and triethylamine (1.48 mmol) was added slowly and the solution was heated to 323 K for 4 h. The reaction was monitored by TLC. The reaction mixture was cooled and washed with 10% sodium bicarbonate solution. The organic layer was separated, dried and concentrated to obtain the crude compound. It was purified by column chromatography using petroleum ether: ethyl acetate (7:3) as eluent.
Yellow prisms of the title compound suitable for diffraction studies were obtained from evapouration of the solution of the compound in a mixture of petroleum ether: ethyl acetate (7:3).
3. Refinement
The H atom of the NH group was located in a difference map and refined freely. The other H atoms were positioned with idealized geometry using a riding model with C—H = 0.93 Å (aromatic) and 0.97 Å (methylene). Isotropic displacement parameters for all H atoms were set to 1.2 times Ueq of the parent atom.
Figures
Fig. 1.

Molecular structure of the title compound, showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level.
Fig. 2.

Linking of individual molecules into C(7) chains parallel to [001] through N—H···N hydrogen bonds. H-atoms not involved in H-bonding are omitted for clarity.
Crystal data
| C11H10ClN3O2S | Prism |
| Mr = 283.73 | Dx = 1.482 Mg m−3 |
| Monoclinic, P21/c | Melting point: 492 K |
| Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
| a = 5.4140 (6) Å | Cell parameters from 1103 reflections |
| b = 18.172 (2) Å | θ = 1.9–27.8° |
| c = 12.9392 (15) Å | µ = 0.46 mm−1 |
| β = 92.388 (6)° | T = 293 K |
| V = 1271.9 (2) Å3 | Prism, yellow |
| Z = 4 | 0.35 × 0.29 × 0.23 mm |
| F(000) = 584 |
Data collection
| Bruker APEXII CCD diffractometer | 2961 independent reflections |
| Radiation source: fine-focus sealed tube | 2185 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.035 |
| φ and ω scans | θmax = 27.8°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −7→7 |
| Tmin = 0.852, Tmax = 0.899 | k = −23→23 |
| 20929 measured reflections | l = −13→16 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.137 | H atoms treated by a mixture of independent and constrained refinement |
| S = 0.82 | w = 1/[σ2(Fo2) + (0.0847P)2 + 0.7427P] where P = (Fo2 + 2Fc2)/3 |
| 2961 reflections | (Δ/σ)max < 0.001 |
| 167 parameters | Δρmax = 0.27 e Å−3 |
| 0 restraints | Δρmin = −0.39 e Å−3 |
Special details
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| HN2 | 0.486 (4) | 0.3469 (13) | 0.213 (2) | 0.058 (7)* | |
| S1 | 0.32655 (10) | 0.44681 (3) | 0.19440 (4) | 0.0590 (2) | |
| Cl1 | 1.10225 (15) | 0.64661 (4) | 0.41805 (6) | 0.0911 (3) | |
| C1 | 0.5418 (4) | 0.50525 (11) | 0.25986 (16) | 0.0486 (4) | |
| C7 | 0.6225 (4) | 0.32076 (10) | 0.00501 (15) | 0.0474 (4) | |
| N2 | 0.4712 (4) | 0.37356 (11) | 0.16614 (15) | 0.0584 (5) | |
| C3 | 0.8769 (4) | 0.59143 (12) | 0.35659 (18) | 0.0600 (5) | |
| N3 | 0.5621 (4) | 0.22140 (11) | −0.15918 (16) | 0.0692 (5) | |
| C11 | 0.4300 (4) | 0.27124 (12) | −0.00074 (17) | 0.0571 (5) | |
| H11 | 0.3157 | 0.2700 | 0.0509 | 0.068* | |
| N1 | 0.8263 (5) | 0.60509 (13) | 0.2581 (2) | 0.0899 (7) | |
| O1 | 0.1498 (3) | 0.42543 (11) | 0.26714 (16) | 0.0804 (5) | |
| O2 | 0.2501 (4) | 0.48324 (12) | 0.10098 (16) | 0.0912 (6) | |
| C10 | 0.4071 (4) | 0.22353 (13) | −0.08329 (19) | 0.0653 (6) | |
| H10 | 0.2746 | 0.1909 | −0.0856 | 0.078* | |
| C5 | 0.6049 (6) | 0.49344 (15) | 0.36172 (19) | 0.0785 (8) | |
| H5 | 0.5314 | 0.4553 | 0.3973 | 0.094* | |
| C2 | 0.6559 (6) | 0.56102 (15) | 0.2099 (2) | 0.0822 (8) | |
| H2 | 0.6153 | 0.5691 | 0.1402 | 0.099* | |
| C8 | 0.7862 (5) | 0.31869 (14) | −0.0734 (2) | 0.0676 (6) | |
| H8 | 0.9200 | 0.3508 | −0.0731 | 0.081* | |
| C6 | 0.6641 (4) | 0.37509 (14) | 0.09095 (17) | 0.0635 (6) | |
| H6A | 0.8220 | 0.3648 | 0.1262 | 0.076* | |
| H6B | 0.6725 | 0.4241 | 0.0617 | 0.076* | |
| C4 | 0.7741 (6) | 0.53707 (15) | 0.41083 (18) | 0.0797 (8) | |
| H4 | 0.8183 | 0.5298 | 0.4803 | 0.096* | |
| C9 | 0.7497 (5) | 0.26847 (16) | −0.1525 (2) | 0.0805 (8) | |
| H9 | 0.8635 | 0.2675 | −0.2044 | 0.097* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0487 (3) | 0.0671 (4) | 0.0603 (4) | −0.0063 (2) | −0.0084 (2) | 0.0061 (3) |
| Cl1 | 0.0924 (5) | 0.0868 (5) | 0.0934 (5) | −0.0227 (4) | −0.0072 (4) | −0.0295 (4) |
| C1 | 0.0463 (10) | 0.0461 (10) | 0.0534 (11) | 0.0038 (8) | 0.0016 (8) | 0.0003 (8) |
| C7 | 0.0480 (10) | 0.0485 (10) | 0.0454 (10) | 0.0020 (8) | −0.0032 (8) | 0.0064 (8) |
| N2 | 0.0767 (12) | 0.0571 (10) | 0.0413 (10) | −0.0150 (9) | 0.0034 (8) | 0.0012 (8) |
| C3 | 0.0623 (13) | 0.0550 (12) | 0.0626 (14) | −0.0032 (10) | 0.0027 (10) | −0.0153 (10) |
| N3 | 0.0808 (13) | 0.0633 (11) | 0.0640 (12) | 0.0020 (10) | 0.0095 (10) | −0.0132 (9) |
| C11 | 0.0542 (11) | 0.0622 (12) | 0.0554 (12) | −0.0072 (10) | 0.0088 (9) | −0.0077 (10) |
| N1 | 0.1045 (18) | 0.0783 (14) | 0.0853 (17) | −0.0339 (13) | −0.0122 (14) | 0.0155 (12) |
| O1 | 0.0526 (9) | 0.0965 (13) | 0.0928 (13) | −0.0144 (9) | 0.0127 (9) | −0.0050 (11) |
| O2 | 0.0814 (12) | 0.1002 (14) | 0.0883 (14) | −0.0074 (10) | −0.0385 (11) | 0.0283 (11) |
| C10 | 0.0620 (13) | 0.0641 (13) | 0.0700 (15) | −0.0071 (11) | 0.0051 (11) | −0.0144 (11) |
| C5 | 0.106 (2) | 0.0773 (16) | 0.0522 (14) | −0.0350 (15) | 0.0037 (13) | 0.0053 (12) |
| C2 | 0.098 (2) | 0.0758 (16) | 0.0713 (16) | −0.0242 (14) | −0.0187 (15) | 0.0251 (13) |
| C8 | 0.0635 (14) | 0.0694 (14) | 0.0710 (15) | −0.0096 (11) | 0.0158 (12) | −0.0021 (12) |
| C6 | 0.0645 (13) | 0.0728 (14) | 0.0532 (12) | −0.0219 (11) | 0.0026 (10) | −0.0049 (11) |
| C4 | 0.111 (2) | 0.0838 (17) | 0.0432 (12) | −0.0313 (15) | −0.0079 (13) | −0.0001 (11) |
| C9 | 0.0896 (19) | 0.0863 (18) | 0.0678 (16) | −0.0030 (15) | 0.0309 (14) | −0.0107 (14) |
Geometric parameters (Å, º)
| S1—O1 | 1.4238 (19) | N3—C9 | 1.328 (3) |
| S1—O2 | 1.4244 (18) | C11—C10 | 1.377 (3) |
| S1—N2 | 1.595 (2) | C11—H11 | 0.9300 |
| S1—C1 | 1.767 (2) | N1—C2 | 1.354 (3) |
| Cl1—C3 | 1.745 (2) | C10—H10 | 0.9300 |
| C1—C2 | 1.364 (3) | C5—C4 | 1.350 (3) |
| C1—C5 | 1.365 (3) | C5—H5 | 0.9300 |
| C7—C11 | 1.376 (3) | C2—H2 | 0.9300 |
| C7—C8 | 1.375 (3) | C8—C9 | 1.379 (4) |
| C7—C6 | 1.497 (3) | C8—H8 | 0.9300 |
| N2—C6 | 1.457 (3) | C6—H6A | 0.9700 |
| N2—HN2 | 0.78 (3) | C6—H6B | 0.9700 |
| C3—N1 | 1.316 (3) | C4—H4 | 0.9300 |
| C3—C4 | 1.346 (3) | C9—H9 | 0.9300 |
| N3—C10 | 1.318 (3) | ||
| O1—S1—O2 | 120.54 (13) | N3—C10—H10 | 118.1 |
| O1—S1—N2 | 105.88 (11) | C11—C10—H10 | 118.1 |
| O2—S1—N2 | 108.75 (13) | C4—C5—C1 | 120.0 (2) |
| O1—S1—C1 | 107.16 (11) | C4—C5—H5 | 120.0 |
| O2—S1—C1 | 106.87 (11) | C1—C5—H5 | 120.0 |
| N2—S1—C1 | 106.94 (10) | N1—C2—C1 | 122.3 (2) |
| C2—C1—C5 | 118.3 (2) | N1—C2—H2 | 118.9 |
| C2—C1—S1 | 121.47 (18) | C1—C2—H2 | 118.9 |
| C5—C1—S1 | 120.14 (17) | C7—C8—C9 | 119.2 (2) |
| C11—C7—C8 | 116.9 (2) | C7—C8—H8 | 120.4 |
| C11—C7—C6 | 124.15 (19) | C9—C8—H8 | 120.4 |
| C8—C7—C6 | 118.97 (19) | N2—C6—C7 | 113.18 (17) |
| C6—N2—S1 | 120.65 (17) | N2—C6—H6A | 108.9 |
| C6—N2—HN2 | 118.6 (19) | C7—C6—H6A | 108.9 |
| S1—N2—HN2 | 112.0 (18) | N2—C6—H6B | 108.9 |
| N1—C3—C4 | 124.7 (2) | C7—C6—H6B | 108.9 |
| N1—C3—Cl1 | 116.52 (19) | H6A—C6—H6B | 107.8 |
| C4—C3—Cl1 | 118.74 (19) | C3—C4—C5 | 118.2 (2) |
| C10—N3—C9 | 116.2 (2) | C3—C4—H4 | 120.9 |
| C7—C11—C10 | 119.8 (2) | C5—C4—H4 | 120.9 |
| C7—C11—H11 | 120.1 | N3—C9—C8 | 124.1 (2) |
| C10—C11—H11 | 120.1 | N3—C9—H9 | 118.0 |
| C3—N1—C2 | 116.4 (2) | C8—C9—H9 | 118.0 |
| N3—C10—C11 | 123.8 (2) | ||
| O1—S1—C1—C2 | −148.2 (2) | C2—C1—C5—C4 | 0.9 (4) |
| O2—S1—C1—C2 | −17.7 (3) | S1—C1—C5—C4 | 178.3 (2) |
| N2—S1—C1—C2 | 98.7 (2) | C3—N1—C2—C1 | 0.0 (5) |
| O1—S1—C1—C5 | 34.4 (2) | C5—C1—C2—N1 | −0.7 (5) |
| O2—S1—C1—C5 | 164.9 (2) | S1—C1—C2—N1 | −178.2 (2) |
| N2—S1—C1—C5 | −78.7 (2) | C11—C7—C8—C9 | 0.3 (3) |
| O1—S1—N2—C6 | 178.59 (17) | C6—C7—C8—C9 | 179.6 (2) |
| O2—S1—N2—C6 | 47.7 (2) | S1—N2—C6—C7 | −125.57 (19) |
| C1—S1—N2—C6 | −67.37 (19) | C11—C7—C6—N2 | −3.3 (3) |
| C8—C7—C11—C10 | −0.9 (3) | C8—C7—C6—N2 | 177.4 (2) |
| C6—C7—C11—C10 | 179.8 (2) | N1—C3—C4—C5 | −0.6 (5) |
| C4—C3—N1—C2 | 0.7 (5) | Cl1—C3—C4—C5 | −178.2 (2) |
| Cl1—C3—N1—C2 | 178.4 (2) | C1—C5—C4—C3 | −0.2 (5) |
| C9—N3—C10—C11 | 0.5 (4) | C10—N3—C9—C8 | −1.2 (4) |
| C7—C11—C10—N3 | 0.5 (4) | C7—C8—C9—N3 | 0.8 (4) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—HN2···N3i | 0.78 (3) | 2.10 (3) | 2.870 (3) | 174.53 |
Symmetry code: (i) x, −y+1/2, z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: WM2782).
References
- Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573.
- Bruker (2009). APEX2, SADABS and SAINT-Plus Bruker AXS Inc., Madison, Wisconsin, USA.
- Desai, N. C., Satodiya, H. M., Rajpara, K. M., Joshi, V. V. & Vaghani, H. V. (2013). Indian J. Chem. Sect. B, 52, 904–914.
- Gobis, K., Foks, H., Slawinski, J., Augustynowicz-Kopec, E. & Napiorkowska, A. (2013). Monatsh. Chem. 144, 1197–1203. [DOI] [PMC free article] [PubMed]
- Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470.
- Mohan, R. N., Sreenivasa, S., Manojkumar, K. E. & Madhu Chakrapani Rao, T. (2013). J. Appl. Chem. 2, 722–729.
- Renu, M., Mithu, B., Anasuya, R., Tapas, M., Leslie, W., Takashi, O., Bhabatarak, B. & Dulal, P. (2006). Biochemistry, 45, 5440–5449.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536813030523/wm2782sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813030523/wm2782Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536813030523/wm2782Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
