Abstract
In an attempt to gain a better understanding of the mechanism of action of carboxypeptidase A (EC 3.4.2.1), many kinetic studies have been undertaken using numerous substrates—both esters and peptides—that have exhibited substrate linearity, inhibition, activation, and sigmoid-shaped rate plots. Numerous interpretations of the kinetic data have been proposed, none of which are fully in accord both with kinetic data and x-ray crystallographic studies. Much of the kinetic data has been interpreted using multisite binding while the x-ray information seems to severely restrict these possibilities.
We have examined the feasibility of a simple model with a single active site, without modifier sites, that allows only one substrate molecule to bind the enzyme at a time. A random-pathway model was identified that simultaneously accounts for the nonlinear kinetic data and meets the restrictions imposed by the x-ray crystallographic studies.
Keywords: x-ray crystallography, esters, peptides, enzyme kinetics, random-pathway model
Full text
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Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Auld D. S., Vallee B. L. Kinetics of carboxypeptidase A. II. Inhibitors of the hydrolysis of oligopeptides. Biochemistry. 1970 Feb 3;9(3):602–609. doi: 10.1021/bi00805a022. [DOI] [PubMed] [Google Scholar]
- Barton J. S., Fisher J. R. Nonlinear kinetics of glutamate dehydrogenase. Studies with substrates--glutamate and nicotinamide-adenine dinucleotide. Biochemistry. 1971 Feb 16;10(4):577–585. doi: 10.1021/bi00780a006. [DOI] [PubMed] [Google Scholar]
- Carson F. W., Kaiser E. T. pH dependence of the hydrolysis of O-acetyl-L-mandelate catalyzed by carboxypeptidase A. A critical examination. J Am Chem Soc. 1966 Mar 20;88(6):1212–1223. doi: 10.1021/ja00958a024. [DOI] [PubMed] [Google Scholar]
- Hammes G. G. Relaxation spectrometry of biological systems. Adv Protein Chem. 1968;23:1–57. doi: 10.1016/s0065-3233(08)60399-x. [DOI] [PubMed] [Google Scholar]
- Kaiser E. T., Awazu S., Carson F. W. The hydrolysis of O-hippuryglycolate catalyzed by carboxypeptidase A. Evidence for possible allosteric effects. Biochem Biophys Res Commun. 1965 Dec 9;21(5):444–447. doi: 10.1016/0006-291x(65)90402-x. [DOI] [PubMed] [Google Scholar]
- Lipscomb W. N., Reeke G. N., Jr, Hartsuck J. A., Quiocho F. A., Bethge P. H. The structure of carboxypeptidase A. 8. Atomic interpretation at 0.2 nm resolution, a new study of the complex of glycyl-L-tyrosine with CPA, and mechanistic deductions. Philos Trans R Soc Lond B Biol Sci. 1970 Feb 12;257(813):177–214. doi: 10.1098/rstb.1970.0020. [DOI] [PubMed] [Google Scholar]
- MCCLURE W. O., NEURATH H., WALSH K. A. THE REACTION OF CARBOXYPEPTIDASE A WITH HIPPURYL-DL-BETA-PHENYLLACTATE. Biochemistry. 1964 Dec;3:1897–1901. doi: 10.1021/bi00900a019. [DOI] [PubMed] [Google Scholar]
- Neurath H., Bradshaw R. A., Pétra P. H., Walsh K. A. 3. Carboxypeptidase. Bovine carboxypeptidase A--activation, chemical structure and molecular heterogeneity. Philos Trans R Soc Lond B Biol Sci. 1970 Feb 12;257(813):159–176. doi: 10.1098/rstb.1970.0019. [DOI] [PubMed] [Google Scholar]
- RIORDAN J. F., VALLEE B. L. ACETYLCARBOXYPEPTIDASE. Biochemistry. 1963 Nov-Dec;2:1460–1468. doi: 10.1021/bi00906a045. [DOI] [PubMed] [Google Scholar]
- SIMPSON R. T., RIORDAN J. F., VALLEE B. L. FUNCTIONAL TYROSYL RESIDUES IN THE ACTIVE CENTER OF BOVINE PANCREATIC CARBOXYPEPTIDASE A. Biochemistry. 1963 May-Jun;2:616–622. doi: 10.1021/bi00903a039. [DOI] [PubMed] [Google Scholar]
- Vallee B. L., Riordan J. F., Bethune J. L., Coombs T. L., Auld D. S., Sokolovsky M. A model for substrate binding and kinetics of carboxypeptidase A. Biochemistry. 1968 Oct;7(10):3547–3556. doi: 10.1021/bi00850a032. [DOI] [PubMed] [Google Scholar]