Abstract
Nuclear factor-κB-inducing kinase (NIK) is known to play a critical role in maintaining proper immune function. This is exemplified in the spontaneous mutant mouse lacking functional NIK, alymphoplasia (aly), which is simultaneously immune-compromised and autoimmune-prone. To investigate the role of NIK in αβ T-cell repertoire formation, we analysed T-cell development in aly/aly mice bearing a transgenic T-cell receptor (TCR). Although there were no apparent abnormalities in the mature αβ T cells of non-transgenic aly/aly mice, the maturation efficiency of idiotypehigh+ T cells in the TCR-transgenic mice was lower in aly/aly mice compared with those found in aly/+ mice, suggesting that the mature αβ T-cell repertoire could be altered by the absence of functional NIK. In one strain of TCR-transgenic aly/aly mice with a negatively selecting H-2 background, the proportion of CD8low+ idiotypehigh+ cells, which are thought to potentially represent the γδ lineage of T cells, was markedly decreased. When the γδ T cells in non-transgenic aly/aly mice were investigated, the proportion of γδ T cells in the peripheral organs of aly/aly mice was found to be one-half to one-fifth of those in aly/+ mice. Analyses of bone marrow chimera mice indicated that NIK in host cells, rather than in donor cells was important for generating a normal number of peripheral γδ T cells. Collectively, these results suggest that NIK could be involved in thymic positive selection of some αβ T cells and that NIK in non-haematopoietic cells is important for the optimal development and/or maintenance of γδ T cells.
Keywords: nuclear factor-κB-inducing kinase, repertoire formation, T-cell receptor-transgenic mouse
Introduction
The development of αβ T cells in the thymus is a multi-step process that depends crucially on signalling from T-cell receptors (TCRs). In the thymocytes in which successful recombination of the TCR-β gene segments has occurred, pre-TCR complexes composed of the TCR-β chain and the pTα chain are generated, and the ligand-independent triggering of the pre-TCR signal drives the thymocyte differentiation forward to CD4/CD8 double-positive (DP) stages.1 Further maturation requires signalling from TCR-αβ, but the signalling from TCR-αβ on DP thymocytes should be strictly controlled, because the strength and/or duration of the TCR signalling has to be converted into different signals in quality, leading the cells to different fates. Namely, while apoptosis would be induced in the DP cells bearing TCR-αβ that interact too strongly with self-peptide/MHC molecules, the DP thymocytes with moderate avidity with self-peptide/MHC would survive to mature into CD4 or CD8 single-positive (SP) cells, depending on the classes of MHC molecules with which they have interacted.
Signalling from TCR activates a number of transcription factors. Among them, nuclear factor-κB (NF-κB) has been demonstrated to be one of the important regulators for thymocyte differentiation.2 It has been demonstrated that NF-κB activation is observed at β-selection3 as well as positive and negative selection of αβ T cells.4,5 Although the PKCθ/Carma1/Bcl10/Malt1 pathways for IκB kinase activation seems pivotal for TCR-induced NF-κB activation in peripheral mature T cells, abrogation of this pathway does not affect TCR-induced NF-κB activation in thymocytes as much as in peripheral T cells.7,8 These observations indicate that the molecules that mediate TCR-induced NF-κB activation in immature thymocytes may be different from those in mature T cells.
The NF-κB-inducing kinase, NIK, is known to contribute to NF-κB activation,10 and to play diverse roles in various aspects of homeostasis. Its in vivo roles have been investigated mainly using an NIK-deficient mouse11 and a spontaneous mutant mouse, alymphoplasia (aly).12 The alymphoplasia mouse was isolated as a mutant mouse that lacked all lymph nodes and Peyer’s patches,12 and its causal mutation has been identified on the NIK gene.13 The mutation is a mis-sense mutation (G855R), which results in defective interaction with IκB kinase α, resulting in impaired phosphorylation of p100.14 Regarding the role of NIK in TCR signalling in thymocytes, it has been shown that NF-κB activation upon anti-CD3 stimulation was attenuated in aly/aly thymocytes,15 suggesting that NIK plays mandatory roles in TCR-mediated NF-κB activation in thymocytes. These results also suggested a possibility that the NIK in thymocytes may be involved in thymic selection, and so in peripheral T-cell repertoire formation.
In aly/aly mice, however, apparent abnormalities have not been found in T-cell development.12 The numbers of thymocytes or splenic T cells in aly/aly mice are normal, and the peripheral CD4+/CD8+ ratio is almost the same as that in wild-type (WT) mice. Nevertheless, it is still possible that the threshold of positive or negative selection may be shifted by the aly mutation, and that the mature T-cell repertoire in aly/aly mice may be different from that in WT mice. In such a case, the analyses should be performed with a fixed TCR, using TCR transgenic (Tg) mice, to follow the fate of the T cells expressing a particular TCR.
In contrast to the αβ T cells, information on the role of NIK or of NF-κB activation in the development of another subset of T cells, γδ T cells, is sparse. Although the genetic requirements in the development differ between αβ and γδ T cells,16 it is thought that, like αβ T cells, TCR signalling may be crucial for the maturation of (at least some populations of) γδ T cells in the thymus.17 Intriguingly, differentiation of thymic γδ T cells has been shown to be affected by the lymphotoxin β (LTβ) signalling upon interaction with DP αβ T cells.18 Given that NIK is critical in the signal transduction from LTβ receptor (LTβR),11 it appears quite possible that NIK may play some key roles in the development of γδ T cells, which still remain to be explored.
In the present study, development of αβ T cells and γδ T cells in aly/aly mice have been investigated using the TCR-αβ Tg mouse, to reveal the roles of NIK in the development of αβ and γδ T cells. The results suggested that the efficiency of the positive selection of at least some of αβ T cells could be affected by the lack of functional NIK. It was also suggested that peripheral maintenance and/or the development of γδ T cells may require functional NIK to be expressed in non-haematopoietic cells.
Materials and methods
Mice
C57BL/6J (H-2b), DBA/1 (H-2q), C3H/HeN (H-2k) mice were purchased from Charles River Japan, Inc. (Kanagawa, Japan). B10.S (H-2s) mice were purchased from Japan SLC, Inc. (Shizuoka, Japan). The alymphoplasia mice were obtained from Clea Japan, Inc. (Tokyo, Japan), and were bred onto C57BL/6J > 10 times before inter-breeding to produce the aly/aly mouse or breeding with other strains of mice. The QM11TCR-Tg mouse, possessing the transgenes for the α and β chains of TCR recognizing I-Ak as the allo-antigen, was described previously.19 In some experiments, analyses were performed using QM11TCR-Tg mice with RAG-2-deficient background.19 The green fluorescent protein (GFP) -Tg mouse of C57BL/6 background [C57BL/6 TgN (act-EGFP) OsbY01]20 was kindly provided from Dr Masaru Okabe (Osaka University) and was maintained in our animal facility. All mice used in this study were maintained in a specific pathogen-free facility of Kitasato University School of Medicine. The experimental procedure was approved by the Animal Experimentation and Ethics Committee of the Kitasato University School of Medicine, and all animal experiments were performed following the guidelines of the committee.
Antibodies and reagents
FITC-labelled anti-CD4 antibody (RM4-5), anti-Thy1.2 antibody (53-2.1), and anti-CD25 antibody (PC61) were purchased from BD Pharmingen (San Diego, CA). FITC-labelled antibodies to CD27 antibody (LG.3A10), CD122 antibody (5H4), phycoerythrin-labelled antibodies to γδ TCR (GL3) and CD8 (53-6.7), phycoerythrin-, and phycoerythrin-Cy5-labelled streptavidin were obtained from BioLegend (San Diego, CA). Biotinylated anti-idiotype antibody to QM11TCR was prepared in our laboratory.21 Antibodies to CD3 (2C11), and to FcγR II/III (2.4G2) were prepared from hybridomas in the laboratory.
Preparation of bone marrow chimeras
The recipient aly/aly or aly/+ mice were lethally irradiated (8·5 Gy) using an X-ray irradiator MBR-1505R (Hitachi Medico Co., Tokyo, Japan) with a filter (Cu: 0·5 mm, Al: 1 mm). The following day, the recipient mice were reconstituted with 1·0 × 107 of T-cell-depleted bone marrow (BM) cells from GFP-Tg, aly/aly or aly/+ mice. T-cell depletion was conducted by treating the cells with anti-CD4, anti-CD8 and anti-Thy1.2 antibody plus rabbit complement at 37° for 45 min. The chimeric mice were analysed 60–70 days after BM reconstitution.
Flow cytometry
Flow cytometric analyses were performed as described previously.19 Briefly, 2 × 105 to 10 × 105 cells were stained in and washed with ice-cold Hanks’ balanced salt solution containing 0·5% BSA and 0·02% sodium azide. Secondary staining was carried out in the same manner. Stained cells after washing were examined on FACSCalibur (BD Biosciences, Mountain View, CA) with cell quest software. Cell sorting was performed using FACSAria (BD Biosciences).
ELISA
The concentrations of interferon-γ (IFN-γ) in the culture supernatants were measured by sandwich ELISA, using ‘high-binding’ EIA/RIA plates (Costar, NY), purified or biotinylated antibodies (Caltag, CA), and horseradish peroxidase-conjugated streptavidin (Thermo Scientific, Rockford, IL). As the substrate for peroxidase, a TMB (3,3′,5,5′-tetramethylbenzidine) liquid substrate system (Sigma, St Louis, MO) was used, and the reaction was stopped by adding the same amount of 0.5 m H2SO4. After stopping the reaction, the absorbance at 450 nm was measured.
Results
The absence of functional NIK could affect the efficiency of thymic positive selection of T cells expressing a transgenic TCR
The fact that alymphoplasia mice have a normal number of T cells suggests that the absence of NIK may not have a significant impact on T-cell development. However, we examined the possibility that the aly mutation could affect the threshold of thymic selection by investigating the differentiation of T cells expressing a fixed, transgenic TCR. The TCR-Tg mouse used here was the QM11TCR-Tg mouse that we developed and have reported on previously.19 In this TCR-Tg system, several different selecting MHC molecules have been identified. Among these, class I MHC Dq/Lq and class II MHC I-Aq were identified to be the positively selecting elements to drive Tg-TCR+ T cells to differentiate CD8+ or CD4+ T cells, respectively.19 Hence, on an H-2q background, selecting MHC molecules of both class I and class II are available simultaneously. Indeed, in this situation, differentiation of idiotypehigh+ cells into both CD4SP and CD8SP cells could be observed.19
We crossed aly/aly mice with the QM11TCR-Tg mice and examined whether the differentiation of the idiotypehigh+ cells could be influenced by the aly mutation. As shown in Fig. 1a,b, in H-2q, QM11TCR-Tg, aly/aly mice, the efficiency of positive selection of idiotypehigh+ cells was decreased compared with that in aly/+ mice. The effect was more pronounced for differentiation into CD8SP cells than into CD4SP cells. It should be noted, however, that differentiation of idiotypehigh+ cells into CD4SP was also less effective in aly/aly mice, although it was not statistically significant. The same tendency was also observed in splenic mature T cells. Notably, the reduction of the proportion of idiotypehigh+ cells in aly/aly mice was statistically significant for both CD4+ and CD8+ T cells (Fig. 1c), whereas the total T-cell number was not decreased in aly/aly mice (data not shown).
These results were also reproduced when analysed on a RAG-2-deficient background (see Supplementary material, Fig. S1). The number of idiotypehigh+ cells either of CD4SP or CD8SP mature thymocytes were smaller in aly/aly mice compared with those in aly/+ mice. This was also true for the number of CD4+ or CD8+ T cells in the spleen.
These results indicate that NIK plays an important role in the optimal positive selection of at least some subsets of T cells, and so that the αβ T-cell repertoire in the aly/aly mouse may be different from that in the normal mouse.
The effects of aly mutation on the negative selection of T cells expressing the transgenic TCR
We next examined the impact of aly mutation on the negative selection in the QM11TCR-Tg system. In this setting, idiotypehigh+ cells were negatively selected by two different MHC molecules, one of which was I-Ak (original specificity of QM11TCR), and the other was the H-2s class I MHC molecule.19–21 Negative selection of idiotypehigh+ cells in QM11TCR-Tg mice was observed therefore in two strains of mouse; H-2bxk and H-2s. The total number of thymocytes in aly/aly mice of either H-2bxk or H-2s background was not different from that observed in aly/+ mice (Fig. 2a), where the proportion of CD4/CD8 DP subset was dramatically decreased in both aly/+ and aly/aly mice (Fig. 2b, data not shown), implying that negative selection of the cells specific to the antigens expressed in the thymus may be operated properly in aly/aly mice. Unexpectedly, however, it was noticed that in the H-2s background, the CD8low+ idiotypehigh+ cells were markedly reduced in aly/aly mice (Fig. 2c). The CD8low+ idiotypehigh+ cells were also reported in other TCR-Tg mice,22–23 and were demonstrated to exist in any H-2 backgrounds, although their existence is eminent particularly in negatively selecting background. Although the mechanism of their differentiation has not been fully clarified, it was suggested that these cells might be one of the populations that represents the γδ lineage of T cells in the TCR-Tg setting.24 In our system, this population was deleted in the H-2bxk background, probably because of co-receptor-independent recognition of I-Ak by the QM11TCR,25 and therefore the effect of the aly mutation on the generation of this population in the H-2bxk background could not be investigated. Nevertheless, the examination of mice on an H-2s background indicated that the generation of the CD8low+ idiotypehigh+ cells may require functional NIK.
The proportion and the number of γδ T cells, but not αβ T cells, in the peripheral organs were decreased in aly/aly mice
The observation of impaired generation of CD8low+ idiotypehigh+ cells in the periphery of the H-2s, QM11TCR-Tg, aly/aly mice led us to investigate the development of γδ T cells in the non-transgenic aly/aly mouse. In the thymus, despite the total cell number being normal12 (data not shown), the proportion of γδ T cells was slightly reduced in aly/aly mice compared with that in aly/+ mice (Fig. 3a). However, the reduction in aly/aly mouse of the γδ T cells, especially of Thy1.2+ cells, was more evident in peripheral tissues, such as the spleen, peritoneal cavity, bone marrow, liver and lungs (Fig. 3b–g). This also held true in most, but not all, tissues when the absolute numbers of γδ T cells were compared (Fig. 4a). In contrast, as shown in Fig. 4(b), the number of αβ T cells did not decrease in the aly/aly mouse, or rather, it significantly increased in some tissues, such as liver and lung, which might be due to pathogenic infiltration of CD4+ αβ T cells.
The peripheral γδ T cells could be divided into specific subsets according to their expression of activation markers or cell surface molecules.26 We next assessed whether the decrease of peripheral γδ T cells in aly/aly mice may result from impaired generation of some particular γδ subsets, by comparing the expression of CD27, CD25, or CD122 on γδ T cells in the peripheral blood of aly/aly mice with those of aly/+ mice. As shown in Fig. 5, the proportion of cells positive for these markers was almost the same, suggesting that the reduction of the γδ T cells in aly/aly mice may be independent of expression for these markers.
NIK in host cells may be necessary for maintaining a normal number of γδ T cells in the periphery
We next prepared the BM chimera mice to determine whether functional NIK in haematopoietic or host cells was important for the maintenance of a normal number of γδ T cells. For this purpose, the GFP-Tg mouse of B6 background was used to discriminate the donor cells from host cells. We developed the GFP-Tg, aly/aly or aly/+ mice and the BM cells from these mice were injected intravenously into non-Tg aly/aly or aly/+ mice that had been irradiated (8·5 Gy) the day before transfusion of donor cells. After 9 to 10 weeks, the number and proportion of GFP+ γδ T cells in several organs from those chimeric mice were analysed. For unknown reasons, in the BM chimeras, the number or proportion of peripheral γδ T cells was not statistically different in some sites other than peritoneal cavity or BM between the [GFP × aly/aly → aly/aly] mice and the [GFP × aly/+ → aly/+] mice, although there was still a tendency for the γδ T cells to be reduced in the [GFP × aly/aly → aly/aly] chimera compared with the [GFP × aly/+ → aly/+] chimera (Fig. S2, data not shown). In Fig. 6, the number and proportion of the GFP+ γδ T cells in the peritoneal cavity and the BM of each chimera are shown. Both the number and the proportion of γδ T cells were significantly reduced when aly/aly mice were used as hosts, as compared with those in aly/+ recipient mice, even when aly/+ donor cells were transplanted. By contrast, no significant differences in γδ T-cell number or proportion was found between the mice receiving aly/+ BM cells and the mice receiving aly/aly donor cells. These results indicate that NIK in non-haematopoietic cells, rather than γδ precursor cells, is important for supporting a normal number of γδ T cells in the periphery.
Impaired IFN-γ production in CD27+ γδ T cells in aly/aly mice
To assess whether aly mutation would have any impact on the function of γδ T cells, IFN-γ production from splenic γδ T cells was examined. As it was shown that among splenic γδ T cells, CD27+ γδ T cells were the main sources of IFN-γ,27 we sorted CD27+ γδ T cells and stimulated the cells in vitro with plate-bound anti-CD3ε antibody. As shown in Fig. 7, the amount of IFN-γ secreted from aly/aly cells was smaller than that from normal aly/+ cells, suggesting that NIK may contribute not only to the development and/or peripheral distribution of γδ T cells but also to maximal production of IFN-γ from them.
Discussion
Nuclear factor-κB-inducing kinase, which was originally identified as a kinase mediating the signal from tumour mecrosis factor receptor, Fas or interleukin-1 receptor,10 is expressed in various types of cells, and plays a critical role in non-canonical pathways of NF-κB activation.28 The crucial role of NIK in the maintenance of proper immune function was highlighted by analyses of the alymphoplasia mouse, which was revealed to be defective in its ability to mount immune responses against allogeneic cells12 or viruses.29 On the other hand, the aly/aly mouse was also shown to develop autoimmune diseases in exocrine organs, such as lacrimal gland, lung, liver and salivary glands.30 Hence, in the aly/aly mouse, immune responses to foreign antigens seem to be impaired whereas those to autoantigens are more prone to be invoked compared with WT mouse. These observations indicate that the T-cell repertoire may not be appropriately formed in aly/aly mice. In fact, it was demonstrated that autoimmune diseases could be transferred to RAG2 knockout mouse by adoptively transferring a T-cell-enriched fraction of spleen from aly/aly mice.30 Nonetheless, no apparent abnormality was observed either in the thymocytes or splenic T cells in aly/aly mice.12
It has been shown that negative selection is defective in the aly/aly mouse, owing to impaired formation of medullary thymic epithelial cells,31 which were implicated in the deletion of auto-reactive T cells, especially the cells specific for peripheral tissue antigens. NIK is downstream of CD40 or RANK signalling and Akiyama et al.32 demonstrated that defective RANK/CD40-mediated signalling in medullary thymic epithelial cell precursor cells is responsible for impaired medullary thymic epithelial cell formation in aly/aly mouse.
The examination of negative selection in the QM11TCR-Tg, aly/aly mouse disclosed that elimination of T cells recognizing an auto-antigen expressed in the thymus could be properly carried out in aly/aly mice, which is consistent with a previous observation in the HY-TCR Tg mice.31 Hence, the defective self-tolerance in T cells of aly/aly mice appears to be limited against peripheral tissue antigens, particularly those in exocrine organs, although its underlying mechanism is at present unclear. In addition to imperfect negative selection in aly/aly mice, in the present study, we have demonstrated that positive selection in at least some subsets of T cells was indeed affected in aly/aly mice and suggested that NIK could be involved in shaping the αβ T-cell repertoire.
In the QM11TCR-Tg system, where both classes of selecting MHC molecules are available simultaneously, the differentiation of DP thymocytes into CD8SP was more severely affected than was CD4SP differentiation by the aly mutation. This is partly consistent with a previous study by Jimi et al.,4 demonstrating that the inhibition of NF-κB activity in thymocytes by transgenic expression of a ‘super-repressor’ form of IκBα, repressed the CD8SP cell differentiation, but had little impact on CD4SP cell differentiation in TCR-Tg mice. Substantial influence of CD4SP differentiation observed in the QM11TCR-Tg mouse could be due to the differences of TCR specificity, or it might be attributable to some functions of NIK other than NF-κB activation, as described below. We are currently preparing mice to develop BM chimeras so that we could determine whether impaired positive selection in aly/aly mice would be restored by transferring aly/+ BM cells.
In the TCR-Tg system, some unusual populations have been found, one of which is the CD8low+ idiotypehigh+ cells.22–23 Although these cells were initially thought to be an artefact of the TCR transgenic system, detailed analyses of these cells suggested that they might represent γδ T-cell lineage.24 This notion was further corroborated by the findings by Pennington et al.,33 who demonstrated that these cells expressed ‘γδ-biased genes’. Although the putative association between these two populations needs to be examined further in future studies, defective appearance of these populations in the periphery were also observed in our system of aly/aly mice.
Regarding the role of NIK in the development of γδ T cells, it was previously shown by Nanno et al.34 that the proportion of intestinal intraepithelial γδ T cells in aly/aly mice is smaller than that in aly/+ mice. This observation has been herein extended to show that the reduction of γδ T cells is more prominent in other peripheral organs. Thymic differentiation of γδ T cells has been shown to be regulated in trans by DP αβ thymocytes through stimulating the LTβR on γδ T cells;18 for this reason it was speculated that the development of γδ T cells may be influenced by the mutation of NIK which mediates signalling from LTβR.10 Unexpectedly, however, the BM chimera experiment suggested that NIK in host cells rather than donor cells is important for maintaining a normal number of γδ T cells in the peritoneal cavity and in the BM. This observation argues against the possibility that the impaired generation of γδ T cells in aly/aly mice may be the result of the impaired signalling from LTβR in γδ precursor. Rather, this result may indicate that the proper generation of γδ cells would require the intact thymic structure, as was observed in NKT cells.35 Alternatively, considering that the reduction of γδ T cells was more profound in the periphery than in the thymus, the cells in the peripheral tissue may require NIK expression for maintenance of a normal number of γδ T cells. It is also possible that more prominent reduction of γδ T cells in the periphery may result from a defect in emigration from the thymus.36 However, the impaired ability of IFN-γ production from splenic CD27+ γδ T cells from aly/aly mice may still possibly be due to defective trans-differentiation by LTβ stimulation.
The developmental pathways or the molecules involved in the differentiation of γδ T cells have not yet been clarified in comparison to those of αβ T cells. There are numbers of genes that were shown to be crucial in γδ T-cell development, but most of these are also mandatory for αβ T-cell differentiation.16 In terms of this, NIK may be a rare molecule whose absence affects the appearance of γδ but not αβ T cells. Furthermore, very few molecules have been described that need to be expressed in non-haematopoietic cells in contributing to proper γδ T-cell generation.
Although further investigation is essential to understand the molecular basis of NIK involvement in the maintenance of γδ cells, the function of NIK to support γδ T-cell differentiation could be independent of the non-canonical pathway of NF-κB activation, as it was shown that in mice deficient for either NF-κB2 or RelB, the proportion and number of γδ T cells remained unaltered.37 A similar situation has been reported that while the number of CD4+ FoxP3+ regulatory T cells is diminished in the aly/aly mouse, no such regulatory T-cell reduction was observed in NF-κB2-deficient mice.38–39 In this context, some studies have indicated that, in addition to NF-κB activation, NIK could participate in other signalling pathways, such as signal transducer and activator of transcription 340 or mitogen-activated protein kinases.41 Defining the pathways through which NIK takes part in γδ T-cell differentiation would lead to uncovering a novel function of NIK, which is being attempted in our ongoing study.
Acknowledgments
KE, MO, SK and HN designed and performed experiments, and analysed data. KE and KI wrote the manuscript. NS and KI supervised the research. This work was supported by a Grant-in-Aid for Scientific Research (KAKENHI) (22501024 to KE), and by the Private Universities Grant for Promotion of Fundamental Strategic Research from the Ministry of Education, Culture, Sports, Science and Technology.
Glossary
- Aly
alymphoplasia
- B6
C57BL/6
- BM
bone marrow
- DP
double positive
- LTβR
lymphotoxin β receptor
- MHC
major histocompatibility complex
- mTEC
medullary thymic epithelial cell
- NIK
nuclear factor-κB-inducing kinase
- RAG
recombination activating gene
- SP
single positive
- Tg
transgenic
- TCR
T-cell antigen receptor
- WT
wild-type
Disclosures
The authors declare no financial or commercial conflict of interest.
Supporting Information
Additional Supporting Information may be found in the online version of this article:
References
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