Abstract
Five restriction fragment length polymorphisms in the human alpha/beta interferon (IFN-alpha/beta) gene region were identified, three with an IFN-alpha probe and two with an IFN-beta probe. Heterozygosities are 74% for IFN-alpha, 57% for IFN-beta, and 87% jointly, making IFN-alpha/beta genes excellent markers for the short arm of chromosome 9. The pedigrees of about 25 families of Caucasian background were studied. Segregation analysis disclosed the occurrence of 12 of 32 possible haplotypes. No recombinant was found between IFN-alpha and -beta genetic markers; linkage disequilibrium within the IFN-alpha markers is of a similar order of magnitude as that between the IFN-alpha and -beta markers. The IFN-alpha and -beta genes might cluster within several hundred kilobases. In two parents, the IFN-beta gene is duplicated; the duplications segregate regularly. They are of independent, probably recent, origin. Therefore, some degree of multiplicity might even be found for IFN-beta, at least in some individuals.
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- Chakravarti A., Buetow K. H., Antonarakis S. E., Waber P. G., Boehm C. D., Kazazian H. H. Nonuniform recombination within the human beta-globin gene cluster. Am J Hum Genet. 1984 Nov;36(6):1239–1258. [PMC free article] [PubMed] [Google Scholar]
- Gross G., Mayr U., Bruns W., Grosveld F., Dahl H. M., Collins J. The structure of a thirty-six kilobase region of the human chromosome including the fibroblast interferon gene IFN-beta. Nucleic Acids Res. 1981 Jun 11;9(11):2495–2507. doi: 10.1093/nar/9.11.2495. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lund B., Edlund T., Lindenmaier W., Ny T., Collins J., Lundgren E., von Gabain A. Novel cluster of alpha-interferon gene sequences in a placental cosmid DNA library. Proc Natl Acad Sci U S A. 1984 Apr;81(8):2435–2439. doi: 10.1073/pnas.81.8.2435. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Migone N., Feder J., Cann H., van West B., Hwang J., Takahashi N., Honjo T., Piazza A., Cavalli-Sforza L. L. Multiple DNA fragment polymorphisms associated with immunoglobulin mu chain switch-like regions in man. Proc Natl Acad Sci U S A. 1983 Jan;80(2):467–471. doi: 10.1073/pnas.80.2.467. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Riggin C. H., Jr, Pitha P. M. Methylation and a polymorphic restriction site adjacent to human beta-interferon gene. DNA. 1982;1(3):267–271. doi: 10.1089/dna.1.1982.1.267. [DOI] [PubMed] [Google Scholar]
- Sagar A. D., Sehgal P. B., May L. T., Inouye M., Slate D. L., Shulman L., Ruddle F. H. Interferon-beta-related DNA is dispersed in the human genome. Science. 1984 Mar 23;223(4642):1312–1315. doi: 10.1126/science.6546621. [DOI] [PubMed] [Google Scholar]
- Sehgal P. B., May L. T., Sagar A. D., LaForge K. S., Inouye M. Isolation of novel human genomic DNA clones related to human interferon-beta 1 cDNA. Proc Natl Acad Sci U S A. 1983 Jun;80(12):3632–3636. doi: 10.1073/pnas.80.12.3632. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Southern E. M. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol. 1975 Nov 5;98(3):503–517. doi: 10.1016/s0022-2836(75)80083-0. [DOI] [PubMed] [Google Scholar]
- Trent J. M., Olson S., Lawn R. M. Chromosomal localization of human leukocyte, fibroblast, and immune interferon genes by means of in situ hybridization. Proc Natl Acad Sci U S A. 1982 Dec;79(24):7809–7813. doi: 10.1073/pnas.79.24.7809. [DOI] [PMC free article] [PubMed] [Google Scholar]