Table 1.
KRAS |
TP53 |
|||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
chr12:25398284C>A | chr12:25398284C>T | chr12:25398285C>G | chr12:25398285C>A | chr12:25380275T>G | chr17:7574020TC>T | chr17:7577022G>A | chr17:7577094G>C | chr17:7577559G>A | chr17:7578406C>T | chr17:7579406G>T | ||
G12 Read Depth | Alternative
Allele Reads |
|||||||||||
G12V | G12D | G12R | G12C | Q61H | E204fs | R174* | R150P | S109F | R136H | S55* | ||
2P3 | 33 | 9 | 43,0 | 13,0 | 66,0 | 37,0 | 80,0 | 3,14 | 32,0 | |||
2T | 28 | 11 | 39,0 | 27,0 | 81,0 | 55,0 | 86,0 | 14,7 | 29,0 | |||
3P3 | 38 | 3 | 36,0 | 23,0 | 84,0 | 52,0 | 85,0 | 23,0 | 36,0 | |||
3T | 29 | 4 | 30,0 | 16,0 | 60,0 | 35,0 | 80,0 | 25,0 | 26,0 | |||
4P2 | 38 | 57,0 | 16,0 | 71,0 | 41,0 | 78,0 | 7,14 | 26,0 | ||||
4T | 11 | 29,0 | 19,0 | 76,0 | 46,0 | 88,0 | 9,7 | 35,0 | ||||
6P2-2 | 43 | 3 | 40,13 | 24,0 | 78,0 | 60,0 | 87,0 | 25,0 | 34,0 | |||
6P2-1 | 38 | 3 | 45,1 | 16,0 | 71,0 | 46,0 | 81,0 | 24,0 | 30,0 | |||
6T | 29 | 7 | 51,0 | 18,0 | 72,0 | 51,0 | 23,50 | 14,0 | 31,0 | |||
8P2 | 54 | 14 | 82,0 | 33,0 | 65,0 | 9,20 | 42,0 | 28,0 | 98,0 | |||
8P3 | 54 | 8 | 52,0 | 24,0 | 62,0 | 19,17 | 31,0 | 30,0 | 102,0 | |||
8T | 34 | 4 | 61,0 | 35,0 | 88,0 | 34,13 | 43,0 | 43,0 | 137,0 | |||
10P2 | 18 | 3 | 38,0 | 19,0 | 56,0 | 26,0 | 23,0 | 16,0 | 56,0 | |||
10T | 13 | 19,0 | 20,0 | 48,0 | 21,0 | 21,0 | 12,0 | 59,0 | ||||
12P2 | 40 | 4 | 5 | 42,0 | 21,0 | 56,0 | 28,0 | 3,0 | 25,0 | 79,1 | ||
12P3 | 55 | 19 | 54,0 | 10,0 | 26,0 | 12,0 | 5,0 | 8,0 | 47,0 | |||
12T | 52 | 8 | 57,0 | 17,0 | 64,0 | 49,0 | 30,0 | 31,0 | 77,17 | |||
30P3 | 18 | 2 | 22,0 | 13,0 | 38,0 | 24,0 | 20,0 | 20,0 | 30,0 | |||
30T | 17 | 3 | 29,0 | 5,6 | 22,0 | 7,0 | 24,0 | 16,0 | 30,0 | |||
37P2 | 40 | 12 | 7 | 42,0 | 19,0 | 80,0 | 36,0 | 34,0 | 27,0 | 80,0 | ||
37P3 | 39 | 15 | 40,0 | 10,0 | 62,0 | 24,0 | 28,0 | 23,0 | 88,0 | |||
37T | 8 | 5 | 20,0 | 4,0 | 22,32 | 30,0 | 11,0 | 8,0 | 23,0 | |||
41P2 | 27 | 9 | 1 | 46,0 | 27,0 | 88,0 | 52,0 | 39,1 | 42,1 | 120,1 | ||
41P3 | 27 | 10 | 56,0 | 24,0 | 60,0 | 35,0 | 31,0 | 13,0 | 81,0 | |||
41T | 28 | 3 | 48,0 | 46,0 | 122,0 | 50,0 | 55,0 | 62,0 | 136,0 |
Positions listed as Chrom:positionRef>Alt Comma separated numbers: Reference Allele, Alternative Allele Reads T: tumor; P2: PanIN2; P3: PanIN3; Indel: insertion or deletion