Abstract
Aleutian mink disease virus (AMDV) is the only member in genus Amdovirus of the family Parvoviridae. During AMDV infection, six species of viral transcripts are generated from one precursor mRNA through alternative splicing and alternative polyadenylation. In addition to the large non-structural protein NS1, two small non-structural proteins, NS2 and NS3, are putatively encoded (Qiu J, et al: Journal of Virology, 80:654–62, 2006). However, these two proteins have not been experimentally demonstrated during virus infection, and nothing is known about their function. Here, we studied the nonstructural protein expression profile of AMDV, and for the first time, confirmed expression of NS2 and NS3 during infection, and identified their intracellular localization. More importantly, we provided evidence that both NS2 and NS3 are necessary for AMDV replication.
Introduction
Aleutian mink disease virus (AMDV), an autonomous parvovirus, belongs to genus Amdovirus, in the family Parvoviridae (Tijssen et al., 2012). AMDV infection is known only to produce clinical manifestation in mink and ferrets (Aasted, 1985; Porter et al., 1982). AMDV is the only classified member in the genus Amdovirus (Tijssen et al., 2012). However, identification of an Amdovirus sequence in grey fox (GFADV) (Li et al., 2011) suggests the likelihood of more members in this genus. Aleutian mink disease affects mink farming worldwide, and has become the most significant threat to mink production in some area (Newman and Reed, 2006). AMDV infection in neonatal mink kits causes acute, rapidly progressing interstitial pneumonia with a high mortality rate (Alexandersen, 1990); whereas, in adult mink, AMDV undergoes a persistent infection which manifests with symptoms of glomerulonephritis, plasmacytosis, hypergammaglobinemia, arteritis, decreased fertility, and spontaneous abortion (Alexandersen et al., 1994; Gorham et al., 1976). The hypergammaglobulinemia that is characteristic of Aleutian mink disease is partly caused by massively increased level of anti-AMDV antibodies in blood. The antibody and virus complex is deposited within tissues of multiple organs in the body causing inflammation, which also facilitates the entry of virus into certain target cell populations (Kanno et al., 1993a). In vitro infection confirmed the antibody-dependent enhancement of AMDV infection (Bloom et al., 2001; Dworak et al., 1997; Kanno et al., 1993b). Therefore, it is difficult to develop a vaccine to prevent AMDV infection (Aasted et al., 1998). Currently, there are also no prevention or treatment methods available for Aleutian mink disease.
The ferret is another host of AMDV (Porter et al., 1982). Ferrets have been widely bred as pets and laboratory animals, for example, as an animal model of influenza virus (Barnard, 2009) and cystic fibrosis (Sun et al., 2010), but the impact of AMDV infection on the pathogenesis of these other infections has not been studied. Clinical symptoms in ferrets are renal failure, weight loss, splenomegaly, neurological symptoms like seizures and clotting abnormalities, and disease progression will result in death of the ferret within a few months. Recently evidence of AMDV infection was noted in two mink farmers who displayed disease symptoms similar to those of Aleutian mink disease. Hence, AMDV may be a zoonotic disease rarely capable of infecting humans (Jepsen et al., 2009).
The transcription profile of AMDV during infection displays features similar to those of parvoviruses in genera Erythrovirus and Bocavirus (Chen et al., 2010a; Ozawa et al., 1987; Qiu et al., 2006a). The six species of AMDV mRNA transcripts are generated from a single promoter, and are processed through alternative splicing and alternative polyadenylation (Fig. 1A) (Qiu et al., 2006a). R1 and R2 mRNAs encode the large non-structural protein NS1. The NS1 protein is assumed to function similarly to that of other autonomous parvoviruses. Parvovirus NS1 contains motifs of DNA binding, ATPase and helicase activity that play key roles in viral DNA replication, viral promoter transactivation, and induction of cytopathic effects (Nüesch, 2006). Cleavage of the AMDV NS1 has been shown to be critical to AMDV replication (Best et al., 2003). The most abundant transcript is R2, which encodes structural proteins VP1 and VP2 as well as a non-structural protein NS2 (Qiu et al., 2007). NS2 is also potentially encoded by R2′ mRNA. However, NS2 was only shown to be expressed from transfection of R2 mRNA-transcribing plasmids in cells (Qiu et al., 2007). The dynamic expression of the NS2, its subcellular localization, and, more importantly, its function during virus infection have not been studied (Best and Bloom, 2005; Oleksiewicz et al., 1996). Notably, a third non-structural protein NS3 is putatively encoded by Rx and Rx′ mRNAs (Alexandersen et al., 1988). Expression of NS3 has not been experimentally confirmed either by transfection of Rx/Rx′-transcribing plasmid or during virus infection.
Due to the increasing importance of AMDV and its associated diseases in ferrets and potential for human infection, we studied the nonstructural protein expression profile of AMDV during infection. We demonstrated, for the first time, the expression of NS2 and NS3, defined their intracellular localization during infection, and characterized the role of NS2 and NS3 in AMDV DNA replication in the context of an AMDV infectious clone.
Results
AMDV NS2 protein is expressed at a level similar to that of NS1 during infection
To determine whether the putative NS2 and NS3 are expressed during AMDV infection, and their relative expression level compared to that of NS1, we examined NS proteins expression over a time course of 6 days during AMDV-G infection of CrFK cells at a multiplicity of infection (MOI) of 1 (Huang et al., 2012; Qiu et al., 2006a), employing a rabbit polyclonal antibody against the common N-terminal 60 aa shared by NS1, NS2 and NS3 (Fig. 1B). Both NS1 and NS2 were detected at 2 days post-infection (p.i.), reached the highest level at 3 day p.i., remained at a consistent level at 4–5 days p.i., and started to decrease at 6 days p.i. (Fig. 2A). The NS expression dynamics is consistent with the kinetics of the viral DNA replication and virus production during infection as we described previously (Qiu et al., 2006a). Notably, the level of NS2 expression was similar to that of the NS1 over the course of infection. However, the detected NS2 had a size of ~17 kDa (Fig. 2), which is larger than the predicted size at 12.5 kDa (Fig. 1A). We did not detect an obvious band at ~10 kDa (the putative size of NS3) in lysates of AMDV-infected cells resolved by electrophoresis in SDS through a 15% polyacrylamide gel electrophoresis (PAGE) gel, compared with the band from mock-infected cells (Fig. 2B). Thus, the result suggested that NS3 may be expressed at a level much lower than that of NS2.
AMDV NS3 protein is expressed in the nucleus of AMDV-infected cells
We have previously determined that NS3-encoding mRNAs (Rx/Rx′) are transcribed at a comparable level to that of the NS1-encoding mRNAs (R1/R1′) (Fig. 1A) (Qiu et al., 2006a). To prove that NS3 protein was expressed during AMDV infection, we generated an antibody against NS3-specific residues (NS3U, aa 61-87) by immunizing rats with purified GST-fused NS3U (Fig. 3A, GST-NS3U). The specificity of the anti-NS3 antibody was confirmed by Western blotting (Fig. 3B) and immunofluorescence (Fig. 3D–F). Next, we used this antibody to examine NS3 expression during AMDV infection of CrFK cells. At 4 days p.i., we detected NS3 in the nuclei of infected cells (Fig. 4A). Moreover, when AMDV-infected cells were co-stained with antibodies to both NS1 and NS3 (Fig. 4B), NS3 did not co-localize with the NS1. We further used fluorescent in situ hybridization (FISH)-immunofluorescence assay to examine an association of NS3 with viral DNA. The result showed that NS3 did not colocalize with viral DNA (Fig. 4C). Taken together, these results suggest that AMDV NS3 protein is expressed in the nucleus during AMDV infection, but does not localize within the viral DNA replication centers.
AMDV NS1 and NS2 colocalize with each other within the viral DNA replication centers
To understand the function of NS2, we also examined the localization of the NS2 in relation to NS1 and the AMDV DNA replication centers using antibodies that recognize the unique regions of each protein. Anti-NS2 antibody was produced by immunizing rats with purified GST-fused NS2 unique aa 61-114 (Fig. 3A; GST-NS2U). The specificity of the anti-NS2 antibody was confirmed both by Western blotting (Fig. 3C) and immunofluorescence (Fig. 3D–F). Both NS1 (Fig. 4D) and NS2 (Fig. 4E) precisely localized within the viral DNA replication centers, as shown by the FISH-immunofluorescence assay. This result was also supported by the colocalization of the NS1 and NS2 in the nucleus (Fig. 4F). Thus, our results suggested a role for AMDV NS2 in viral DNA replication.
Both NS2 and NS3 are important to the production of infectious progeny virions
To explore a role of NS2 and NS3 in AMDV replication, we created NS protein knockout mutants in the context of an AMDV infectious clone (pIAMDV) and tested them for viral DNA replication as well as infectious virion production. The successful knockout of the NS1, NS2, and NS3 in their respective constructs was confirmed by immunofluorescence analysis (Fig. 3D–F). The mutations in the context of pIAMDV did not alter the levels of each viral transcript in the cytoplasm of the transfected cells as detected by Northern blotting using Probe 2 and Probe 3 (Qiu et al., 2006a), respectively (Fig. 5A&B). The results showed that NS1-knockout mutant [(pIADMV(-NS1)], as a control, did not produce replicative form viral DNA (RF DNA, DpnI digestion-resistant band) from transfection; neither did the NS2- and NS3-knockout mutants [(pIAMDV(-NS2) and pIAMDV(-NS3), respectively] (Fig. 6A). We further infected fresh CrFK cells with the lysate of pIAMDV(-NS1)-, pIAMDV(-NS2)-, pIAMDV(-NS3) and pIAMDV-transfected cells. The results showed that the RF DNA band was obviously detected in Hirt DNA samples prepared from cells infected with lysate of the pIAMDV-transfected cells, but not in samples from cells infected with lysates of the pIAMDV(-NS1)-, pIAMDV(-NS2)-, pIAMDV(-NS3)-transfected cells (Fig. 6B, compare lanes 2–4 with 5). Taken together, these findings suggested that all the NS1, NS2 and NS3 are indispensable for viral DNA replication.
We also looked for virus production from infection of progeny virus produced following transfection of each mutant. Transfection of the three mutants, pIAMDV(-NS1), pIAMDV(-NS2) and pIAMDV(-NS3), did not lead to production of any detectable infectious virions in CrFK cells; whereas reinfection of progeny virus produced from the wild-type control (pIAMDV) generated a titer of 2.0 × 105 fluorescence-focus forming unit (FFU)/ml (Fig. 6C). These results confirmed that all the NS1, NS2 and NS3 are essential to AMDV replication.
Discussion
In this study, we demonstrated the expression of the AMDV NS2 and NS3 during AMDV infection in CrFK cells, and provided evidence of the essential role of both NS2 and NS3 in progeny virus production.
The presence and the roles of small parvovirus non-structural proteins have received limited attention. Expression of small non-structural proteins by parvoviruses has only been demonstrated during B19V infection (Ozawa et al., 1987). B19V expresses two small nonstructural proteins, namely, 11-kDa and 7.5-kDa protein (Luo and Astell, 1993; St and Astell, 1993). The B19V 7.5-kDa is encoded from mRNAs spliced out of NS1-encoding mRNA in a similar manner to that of AMDV NS3. However, the 11-kDa is very different since it is encoded by mRNAs spliced out of VP1/2-encoding mRNA (Qiu et al., 2006b). The function of B19V 7.5-kDa during B19V infection is unknown yet.
Many parvoviruses express a second NS protein, which is smaller than NS1, e.g., MVM NS2 (MW=24 kDa) (Cotmore et al., 1983; Cotmore and Tattersall, 1990). AMDV NS2 is encoded by mRNAs that are spliced in a manner similar to that of the MVM NS2, in that NS2 shares an N-terminus with NS1 and a C-terminus overlapped with NS1 (Pintel et al., 1995). However, AMDV NS2 is much smaller with a predicted MW of only 12.5 kDa, and contains 54 unique amino acids. Notably, AMDV NS2 was detected at a size of ~17 kDa, indicating modifications of the protein, e.g., phosphorylation, as detected in the small nonstructural protein NP1 of bocavirus bovine parvovirus (Lederman et al., 1984). MVM NS2 can be phosphorylated in vitro (Nüesch, 2006). Amino acid alignment between AMDV NS2 and MVM NS2 does not reveal a significant similarity. MVM NS2 is essential to optimal virus replication (Naeger et al., 1990), and has been shown to play a role in capsid assembly (Cotmore et al., 1997) and in egress of progeny virus from the nucleus (Eichwald et al., 2002), but only in certain cell types. MVM NS1 and NS2 interact and colocalize in the APAR body (Young et al., 2002), and replication of MVM DNA is critically dependent on accumulated levels of NS2 at least in murine cells (Choi et al., 2005; Ruiz et al., 2006). The colocalization of AMDV NS2 with NS1 and viral DNA strongly supports a unique role of the AMDV NS2 during infection of CrFK cells.
AMDV NS3-encoding Rx/Rx′ mRNAs were generated at an abundance similar to that of the NS1-encoding R1/R1′ mRNAs (Qiu et al., 2006a). However, the expression level of NS3 protein during AMDV infection was extremely low, and it was not clearly detected by Western-blotting. Detection was possible only by immunofluorescence using a sensitive anti-NS3 antibody that we developed suggesting that either the NS3 protein is translated at low levels or is rapidly turned over or unstable. NS3 clearly did not colocalize with NS1 in the viral DNA replication centers, and was not required for viral DNA replication. It is intriguing that the NS3 is important for virus replication. The NS3 ORF is present in wild-type AMDV strains as well (Fig. 1B) (Gottschalck et al., 1994), suggesting an important role of the NS3 during AMDV infection in vivo. NS3 is a small protein with only 87 amino acids, in which 60 amino acids from the N-terminus are identical to those of the NS1 and NS2 (Fig. 1B). Hence, NS3 only has a unique sequence of 27 aa. Thus, we have demonstrated a critical role of an unusual small non-structural protein in autonomous parvovirus infection. Further mutagenesis study of the 27 aa of the NS3 is warranted to understand its functional motifs.
In conclusion, our study demonstrated multiple controls of AMDV replication by the three non-structural proteins NS1, NS2 and NS3 during infection. The function of the NS3 during virus replication is novel in that it is only contains unique 27aa. The mechanism underlying NS3-controlled AMDV replication warrants further investigation, which might provide insight in the function of the B19V 7.5-kDa protein.
Materials and Methods
Virus and infection
CrFK cells (Crandall feline kidney cell line, ATCC CCL-94) were purchased from the American Type Culture Collection (ATCC, Manassas, VA), and were maintained in Dulbecco’s modified Eagle’s medium with 10% fetal calf serum at 37°C in 5% CO2. CrFK cells were infected with AMDV-G at an MO of 1 (FFU per cell) and kept at 31.8°C as described previously (Bloom et al., 1980; Huang et al., 2012; Porter et al., 1977).
Transfection
Two μg of DNA was transfected CrFK cells on 60-mm plate with Lipofectamine and Plus reagent (Invitrogen, Carlsbad, CA) as described previously (Huang et al., 2012).
Plasmid construction
pIAMDV and its mutants: The parent AMDV infectious clone, pIAMDV, has been previously described (Cheng et al., 2009; Huang et al., 2012). pIAMDV-based NS protein knockout mutants, pIAMDV(-NS1), pIAMDV(-NS2) and pIAMDV(-NS3), were constructed by mutating nucleotide G(404)T and G(407)T, T(2049)A and A(2056)T, and A(1753)T and C(1756)T, respectively, in the AMDV-G genome of pIAMDV, to early terminate translation of NS1, NS2 and NS3. pcDNA-NS2 and pcDNA-NS2 were constructed by inserting the NS2 ORF and NS3 ORF in pcDNA3 (Invitrogen, Grand Island, NY).
Constructs for glutathione S-transferase (GST)-fusion protein expression: The DNA sequences to express the unique C-terminus of the AMDV NS2 (aa 61-114) and NS3 (aa 61-87) were cloned into BamHI/XhoI-digested pGEX4T3 (GE Healthcare, Piscataway, NJ) as pGEX-NS2U and pGEX-NS3U, respectively. All the nucleotide or amino acid numbers shown were referred to the AMDV-G genome sequence (accession no.: JN040434). The sequences of all the constructs were confirmed at MCLAB (South San Francisco, CA).
Southern blot and Northern blot analyses
Low-molecular-weight DNA (Hirt DNA) was isolated by a modified Hirt extraction method from either transfected or infected cells as previously described (Qiu et al., 2006a). Samples were run on a 1% agarose gel, followed by Southern blotting as described previously (Huang et al., 2012; Naeger et al., 1990; Tullis et al., 1993).
Cytoplasmic RNA was isolated from transfected cells using RNeasy Mini Kit (Qiagen, Valencia, CA) following the supplementary protocol for purification of cytoplasmic RNA, and was analyzed following Northern blotting as described previously (Pintel et al., 1983; Qiu et al., 2006a).
Blots were exposed to a GE Health phosphor imaging screen, and analyzed using a Typhoon FLA 9000 Phosphor Imager and ImageQuant™ TL (version 4.2.2) imaging software (GE Heath).
Antibody production
Rat anti-NS2 and NS3 antibodies: GST-fused AMDV NS2- and NS3-unique amino acid sequences (Fig. 1B) were expressed in Escherichia coli BL21 cells transformed with pGEX-NS2 and pGEX-NS3, respectively, and were purified using a GSTrap FF 1-ml column (GE Healthcare) on the Biologic LP system (Bio-Rad, Hercules, CA). Purified proteins were examined for a purity of >90% on SDS-PAGE. Purified proteins (500 μg/ml) were emulsified with TiterMax® Gold adjuvant (TiterMax® USA, Norcross, GA) and used to immunize rats following an animal protocol that has been approved by the KUMC Institutional Animal Care and Use Committee, as previously described (Sun et al., 2009).
Rabbit ant-NS1 and anti-shared NS domain antibodies: NS1-specific antibody (anti-NS1; R2799) and NS1/2/3-reacted antibody (anti-NS1/2/3; R3810) were raised in rabbit by immunizing NS1-unique residues aa 173 to 464 and NS1 peptides aa 2 to 61 (Fig. 1B), respectively, and have been reported previously (Best et al., 2003).
Western-blot analysis
Infected cells were harvested, lysed and resolved by SDS-PAGE. Western blotting was performed as previously described (Huang et al., 2012).
Fluorescence in situ hybridization (FISH) and immunofluorescence assay
An AMDV DNA fragment (nt 1761-2033) was biotinylated using the Label IT FISH (Biotin) Labeling Kit (Mirus, Madison, WI). FISH-immunofluorescence assay was performed as described previously (Luo et al., 2011). Briefly, CrFK cells in wells on 4-well chamber slide (Nunc. Lab-Tek, Thermo Scientific) were infected with AMDV-G. Cells were fixed in 3.7% paraformaldehyde for 16 min, and permeablized with 0.2% Triton X-100 for 10 min. Slides were then treated with 5 μg/ml RNase A at 37°C for 1 hr and washed with 2 × SSC buffer. Next, the slides were dehydrated with 70%, 85% and 100% ethanol in order for 2 min at room temperature, and denatured with 70% formamide for 2 min. Sequentially, the slides were dehydrated with 70% pre-chilled ethanol, 85% and 100% ethanol at room temperature in order for 2 min each. Finally, the slides were hybridized with the biotintylated AMDV probe at 37°C overnight. After hybridization, the slides were incubated with mouse anti-biotin (Abcam, Cambridge, MA) and rat anti-NS1, anti-NS2 or anti-NS3 antibodies followed by incubation with FITC-conjugated anti-mouse and TexRed-conjugated anti-rat secondary antibodies for immunofluorescence analysis as previously described (Chen et al., 2010b). Confocal images were taken at a magnification of 60 × (objective lens), with an Eclipse C1 Plus confocal microscope (Nikon) controlled by Nikon EZ-C1 software.
Research Highlights.
Two small nonstructural proteins, NS2 and NS3, are expressed during AMDV infection.
AMDV NS2 colocalizes with NS1 and viral DNA in the viral replication centers; whereas NS3 does not.
Both AMDV NS2 and NS3 play important roles in the production of infectious progeny virions.
Acknowledgments
This work was supported by PHS grant R01 AI070723 from NIAID. We thank all the members of the Qiu lab for valuable discussions. The work is supported in part by the Intramural Research Program of the National Institutes of Health, National Institute of Allergy and Infectious Diseases.
Footnotes
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