Abstract
AIMS: To develop a sensitive mutation screening procedure suitable for routine analysis of the peripherin/RDS gene, and to estimate the nature and prevalence of peripherin/RDS gene mutations in Swedish patients with autosomal dominant retinitis pigmentosa. METHODS: To make the method as sensitive as possible, as many as eight segments, covering the three exons and the flanking intron sequences of the peripherin/RDS gene, were analysed by denaturing gradient gel electrophoresis. A group of 38 Swedish patients with a clinical diagnosis of autosomal dominant retinitis pigmentosa were screened for mutations in the peripherin/RDS gene. RESULTS: Three point mutations were found in four of the patients and five polymorphisms were defined. One mutation in exon 1, R172W, has been described previously in other ethnic groups as causing a macular degeneration. Another mutation, in exon 2 and causing the substitution F211L, was found in two unrelated patients. A third mutation, resulting in the likely non-pathogenic substitution S289L, as well as a polymorphism not reported previously, was found in exon 3. CONCLUSIONS: The screening procedure described allows detection of mutations in all of the exons, including the polymorphic 5' and 3' ends of the gene, and is therefore suitable for routine screening of peripherin/RDS gene defects in patients with autosomal dominant retinitis pigmentosa. The frequency of mutations found in the Swedish patient group indicates that defects in the peripherin/RDS gene might be a more common cause of autosomal dominant retinitis pigmentosa than was thought previously.
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- Abrams E. S., Stanton V. P., Jr Use of denaturing gradient gel electrophoresis to study conformational transitions in nucleic acids. Methods Enzymol. 1992;212:71–104. doi: 10.1016/0076-6879(92)12006-c. [DOI] [PubMed] [Google Scholar]
- Andréasson S., Ehinger B., Abrahamson M., Fex G. A six-generation family with autosomal dominant retinitis pigmentosa and a rhodopsin gene mutation (arginine-135-leucine). Ophthalmic Paediatr Genet. 1992 Sep;13(3):145–153. doi: 10.3109/13816819209046483. [DOI] [PubMed] [Google Scholar]
- Andréasson S., Ponjavic V., Ehinger B. Full-field electroretinogram in a patient with cutaneous melanoma-associated retinopathy. Acta Ophthalmol (Copenh) 1993 Aug;71(4):487–490. doi: 10.1111/j.1755-3768.1993.tb04623.x. [DOI] [PubMed] [Google Scholar]
- Dryja T. P., Finn J. T., Peng Y. W., McGee T. L., Berson E. L., Yau K. W. Mutations in the gene encoding the alpha subunit of the rod cGMP-gated channel in autosomal recessive retinitis pigmentosa. Proc Natl Acad Sci U S A. 1995 Oct 24;92(22):10177–10181. doi: 10.1073/pnas.92.22.10177. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dryja T. P., Hahn L. B., Kajiwara K., Berson E. L. Dominant and digenic mutations in the peripherin/RDS and ROM1 genes in retinitis pigmentosa. Invest Ophthalmol Vis Sci. 1997 Sep;38(10):1972–1982. [PubMed] [Google Scholar]
- Dryja T. P., McGee T. L., Reichel E., Hahn L. B., Cowley G. S., Yandell D. W., Sandberg M. A., Berson E. L. A point mutation of the rhodopsin gene in one form of retinitis pigmentosa. Nature. 1990 Jan 25;343(6256):364–366. doi: 10.1038/343364a0. [DOI] [PubMed] [Google Scholar]
- Ekström U., Ponjavic V., Abrahamson M., Nilsson-Ehle P., Andrëasson S., Stenström I., Ehinger B. Phenotypic expression of autosomal dominant retinitis pigmentosa in a Swedish family expressing a Phe-211-Leu variant of peripherin/RDS. Ophthalmic Genet. 1998 Mar;19(1):27–37. doi: 10.1076/opge.19.1.27.2179. [DOI] [PubMed] [Google Scholar]
- Farrar G. J., Kenna P., Jordan S. A., Kumar-Singh R., Humphries M. M., Sharp E. M., Sheils D. M., Humphries P. A three-base-pair deletion in the peripherin-RDS gene in one form of retinitis pigmentosa. Nature. 1991 Dec 12;354(6353):478–480. doi: 10.1038/354478a0. [DOI] [PubMed] [Google Scholar]
- Hayashi K., Yandell D. W. How sensitive is PCR-SSCP? Hum Mutat. 1993;2(5):338–346. doi: 10.1002/humu.1380020503. [DOI] [PubMed] [Google Scholar]
- Huang S. H., Pittler S. J., Huang X., Oliveira L., Berson E. L., Dryja T. P. Autosomal recessive retinitis pigmentosa caused by mutations in the alpha subunit of rod cGMP phosphodiesterase. Nat Genet. 1995 Dec;11(4):468–471. doi: 10.1038/ng1295-468. [DOI] [PubMed] [Google Scholar]
- Jordan S. A., Farrar G. J., Kenna P., Humphries P. Polymorphic variation within "conserved" sequences at the 3' end of the human RDS gene which results in amino acid substitutions. Hum Mutat. 1992;1(3):240–247. doi: 10.1002/humu.1380010311. [DOI] [PubMed] [Google Scholar]
- Kajiwara K., Berson E. L., Dryja T. P. Digenic retinitis pigmentosa due to mutations at the unlinked peripherin/RDS and ROM1 loci. Science. 1994 Jun 10;264(5165):1604–1608. doi: 10.1126/science.8202715. [DOI] [PubMed] [Google Scholar]
- Kajiwara K., Hahn L. B., Mukai S., Travis G. H., Berson E. L., Dryja T. P. Mutations in the human retinal degeneration slow gene in autosomal dominant retinitis pigmentosa. Nature. 1991 Dec 12;354(6353):480–483. doi: 10.1038/354480a0. [DOI] [PubMed] [Google Scholar]
- McLaughlin M. E., Sandberg M. A., Berson E. L., Dryja T. P. Recessive mutations in the gene encoding the beta-subunit of rod phosphodiesterase in patients with retinitis pigmentosa. Nat Genet. 1993 Jun;4(2):130–134. doi: 10.1038/ng0693-130. [DOI] [PubMed] [Google Scholar]
- Miller S. A., Dykes D. D., Polesky H. F. A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res. 1988 Feb 11;16(3):1215–1215. doi: 10.1093/nar/16.3.1215. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mullis K. B., Faloona F. A. Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods Enzymol. 1987;155:335–350. doi: 10.1016/0076-6879(87)55023-6. [DOI] [PubMed] [Google Scholar]
- Nichols B. E., Sheffield V. C., Vandenburgh K., Drack A. V., Kimura A. E., Stone E. M. Butterfly-shaped pigment dystrophy of the fovea caused by a point mutation in codon 167 of the RDS gene. Nat Genet. 1993 Mar;3(3):202–207. doi: 10.1038/ng0393-202. [DOI] [PubMed] [Google Scholar]
- Piguet B., Héon E., Munier F. L., Grounauer P. A., Niemeyer G., Butler N., Schorderet D. F., Sheffield V. C., Stone E. M. Full characterization of the maculopathy associated with an Arg-172-Trp mutation in the RDS/peripherin gene. Ophthalmic Genet. 1996 Dec;17(4):175–186. doi: 10.3109/13816819609057891. [DOI] [PubMed] [Google Scholar]
- Ponjavic V., Abrahamson M., Andréasson S., Ehinger B., Fex G. Autosomal dominant retinitis pigmentosa with a rhodopsin mutation (Arg-135-Trp). Disease phenotype in a Swedish family. Acta Ophthalmol Scand. 1997 Apr;75(2):218–223. doi: 10.1111/j.1600-0420.1997.tb00129.x. [DOI] [PubMed] [Google Scholar]
- Ponjavic V., Abrahamson M., Andréasson S., Ehinger B., Fex G., Polland W. A mild phenotype of autosomal dominant retinitis pigmentosa is associated with the rhodopsin mutation Pro-267-Leu. Ophthalmic Genet. 1997 Jun;18(2):63–70. [PubMed] [Google Scholar]
- Reig C., Serra A., Gean E., Vidal M., Arumí J., De la Calzada M. D., Antich J., Carballo M. A point mutation in the RDS-peripherin gene in a Spanish family with central areolar choroidal dystrophy. Ophthalmic Genet. 1995 Jun;16(2):39–44. doi: 10.3109/13816819509056911. [DOI] [PubMed] [Google Scholar]
- Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463–5467. doi: 10.1073/pnas.74.12.5463. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sheffield V. C., Cox D. R., Lerman L. S., Myers R. M. Attachment of a 40-base-pair G + C-rich sequence (GC-clamp) to genomic DNA fragments by the polymerase chain reaction results in improved detection of single-base changes. Proc Natl Acad Sci U S A. 1989 Jan;86(1):232–236. doi: 10.1073/pnas.86.1.232. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Travis G. H., Christerson L., Danielson P. E., Klisak I., Sparkes R. S., Hahn L. B., Dryja T. P., Sutcliffe J. G. The human retinal degeneration slow (RDS) gene: chromosome assignment and structure of the mRNA. Genomics. 1991 Jul;10(3):733–739. doi: 10.1016/0888-7543(91)90457-p. [DOI] [PubMed] [Google Scholar]
- Wells J., Wroblewski J., Keen J., Inglehearn C., Jubb C., Eckstein A., Jay M., Arden G., Bhattacharya S., Fitzke F. Mutations in the human retinal degeneration slow (RDS) gene can cause either retinitis pigmentosa or macular dystrophy. Nat Genet. 1993 Mar;3(3):213–218. doi: 10.1038/ng0393-213. [DOI] [PubMed] [Google Scholar]
- Wroblewski J. J., Wells J. A., 3rd, Eckstein A., Fitzke F., Jubb C., Keen T. J., Inglehearn C., Bhattacharya S., Arden G. B., Jay M. Macular dystrophy associated with mutations at codon 172 in the human retinal degeneration slow gene. Ophthalmology. 1994 Jan;101(1):12–22. doi: 10.1016/s0161-6420(94)31377-7. [DOI] [PubMed] [Google Scholar]
