Table 1.L. gummosus proteins that co-purified with biofilm-degrading activity.
SDS-PAGE band no.a | ProPac SAX-10 fraction no.a | Mol. mass (kDa)b | pIb | ||||
---|---|---|---|---|---|---|---|
L. gummosus homolog | 1 | 2 | 3 | 8 | 17 | ||
α-Lytic protease | nd | 832 | 596 | 2292 | 598 | 20.0 | 9.8 |
β-Lytic metalloendopeptidase | nd | 245 | 51 | 1147 | 291 | 19.1 | 9.3 |
Lysyl endopeptidase 1 | nd | nd | nd | 389 | 60 | 27.4 | 9.0 |
Lysyl endopeptidase 2 | 32 | nd | nd | 229 | 253 | 28.7 | 6.6 |
Hemagglutinin/proteinase | 545 | 51 | nd | 43 | 479 | 31.7 | 5.4 |
OmpA-like protein 1 | 93 | 88 | 586 | 87 | 20 | 12.3 | 7.9 |
OmpA-like protein 2 | 93 | 88 | 419 | 88 | 20 | 12.2 | 8.6 |
a Mascot scores are indicated for the different samples; nd, not detected. bMolecular masses and pI values were calculated for the predicted fully processed enzymes. For the OmpA-like proteins the molecular masses and pI values were calculated for the C-terminal 111 amino acid residues representing the putative peptidoglycan-binding domain. The corresponding values for the full-length proteins are 36.6 kDa and pI = 4.6 for OmpA-like protein 1, and 36.6 kDa and pI = 4.7 for the OmpA-like protein 2.