Skip to main content
Journal of Clinical Microbiology logoLink to Journal of Clinical Microbiology
. 2014 May;52(5):1575–1581. doi: 10.1128/JCM.00162-14

Travel-Related Carbapenemase-Producing Gram-Negative Bacteria in Alberta, Canada: the First 3 Years

Gisele Peirano a,b, Jasmine Ahmed-Bentley e,f, Jeff Fuller e,g, Joseph E Rubin a,b,d, Johann D D Pitout a,c,
Editor: R Patel
PMCID: PMC3993643  PMID: 24599977

Abstract

We describe here the characteristics of Alberta, Canada, patients with infections or colonizations with carbapenemase-producing Gram-negative bacteria during 2010 to 2013 that were linked to recent travel outside Canada. Antimicrobial susceptibility was determined by broth microdilution, and isolates were characterized using PCR, sequencing, and multilocus sequencing typing. A broth mating study was used to assess the transferability of resistance plasmids, which were subsequently characterized. All the patients (n = 12) included in our study had contact with a health care system while abroad. Most of the patients presented with urinary tract infections (UTIs) and were admitted to hospitals within weeks after their return to Alberta. Secondary spread occurred in 1 case, resulting in the death of another patient. The carbapenemase-producing bacteria (n = 17) consisted of Escherichia coli (sequence type 101 [ST101], ST365, ST405, and ST410) with NDM-1, Klebsiella pneumoniae (ST15, ST16, ST147, ST258, ST340, ST512, and ST972) with NDM-1, OXA-181, KPC-2, and KPC-3, Acinetobacter baumannii with OXA-23, Providencia rettgeri with NDM-1, Enterobacter cloacae with KPC-2, and Citrobacter freundii with NDM-1. The blaNDM-1 gene was associated with various narrow- (i.e., IncF) and broad- (i.e., IncA/C and IncL/M) host-range plasmids with different addiction factors. Our results show that NDM-producing K. pneumoniae, belonging to a variety of sequence types with different plasmid scaffolds, are regularly imported from India into Alberta. Clinical microbiology laboratories should remain vigilant in detecting bacteria with carbapenemases.

INTRODUCTION

Gram-negative bacteria, most notably Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Acinetobacter baumannii, are among the most important causes of serious hospital-acquired and community-onset bacterial infections in humans, and resistance to antimicrobial agents in these bacteria has become an increasingly relevant problem (1). Of special concern is the development of resistance to the carbapenems, as these agents are often the last line of effective therapy available for the treatment of infections caused by multiresistant Gram-negative bacteria (2). Most important is the recognition of isolates that harbor carbapenemases that cause resistance to the carbapenems. These enzymes include the class A (i.e., KPC types), the class B (or the metallo-β-lactamases) (i.e., VIM, IPM, and NDM types), and the class D oxacillinases (i.e., OXA enzymes) (3).

NDM was first described in K. pneumoniae and E. coli isolated from a Swedish patient who was previously hospitalized in New Delhi, India (4). Subsequently, bacteria with NDM-1 have been recognized in over 40 countries on every continent, except Antarctica, and these bacteria are considered endemic in the Indian subcontinent (5). NDM-1 has most commonly been reported in E. coli and K. pneumoniae but has also been found in a variety of other members of the Enterobacteriaceae, Acinetobacter spp., Pseudomonas spp., and Vibrio cholerae (6, 7).

KPCs were first reported in the late 1990s from a K. pneumoniae isolated in North Carolina, and to date, more than 10 different KPC variants have been described (8). KPC β-lactamases (especially KPC-2 and -3) have been described in various enterobacterial species, especially Klebsiella spp. and E. coli (9). Several nosocomial outbreaks have been reported from the United States and European, South American, Asian, and Middle Eastern countries (8, 10, 11). KPC-producing bacteria are considered to be endemic in certain parts of the world, such as the northeastern United States, Puerto Rico, Colombia, Greece, Israel, and China, and are important causes of nosocomially acquired infections in some parts of these countries (11).

In May 2013, the Public Health Services of Alberta Health in Canada issued provincial surveillance and management guidelines for carbapenem-resistant Gram-negative bacteria (12). These guidelines were issued directly as a consequence of an outbreak that occurred in April 2012. Health care facilities are required to notify regional public health authorities regarding patients that are colonized or infected by these bacteria, and laboratories are requested to refer isolates to an antimicrobial resistance referral center for additional testing and confirmation of the resistance mechanisms. We undertook a study to characterize imported cases due to Gram-negative bacteria that produce carbapenemases in Alberta, Canada, that occurred over a 3-year period before the Alberta Health guidelines became available. (This work was presented at the 53rd Intersci. Conf. Antimicrob. Agents Chemother., Denver, CO, 10 to 13 September 2013 [13].)

MATERIALS AND METHODS

Alberta, Canada.

The province of Alberta is located in western Canada, has a population of just over 3.7 million people, and is Canada's fourth most populous province. Alberta has ethnic diversity, with the people of Chinese and East Indian origin representing nearly 7% of Alberta's population. Aboriginal Albertans make up approximately 3% of the population. In line with the rest of Canada, the majority of Albertans originated from England, Scotland, Ireland, and Wales, but large numbers also came from other parts of Europe, notably Germany, France, Ukraine, and Scandinavia. Alberta is home to the second highest proportion (2%) of Francophones in western Canada (after Manitoba).

Alberta Health Services (AHS) is the provincial health authority responsible for overseeing the planning and delivery of health support and services to adults and children living in the province of Alberta. AHS has been organized so as to separate acute hospital facilities from smaller hospitals and community services, the latter of which are organized into five zones (North, Edmonton, Central, Calgary, and South). The Calgary zone includes five major acute-care sites, including Foothills Medical Centre, Peter Lougheed Centre, Rockyview General Hospital, South Health Campus, and Alberta Children's Hospital. The Edmonton zone includes eight acute-care sites (hospitals) in the metropolitan area, which include the University of Alberta Hospital (Edmonton), Royal Alexandra Hospital (Edmonton), Gray Nuns Hospital (Edmonton), Misericordia Community Hospital (Edmonton), Sturgeon Community Hospital (St. Albert), Leduc Community Hospital (Leduc), WestView Health Centre (Stony Plain), and Fort Saskatchewan Community Hospital (Fort Saskatchewan).

Patients.

The first description of travel-related carbapenemase-producing bacteria was of a case that occurred during April 2010 when E. coli with NDM-1 was isolated from a patient with pyelonephritis and prostatitis who returned to Canada after recent hospitalization in India (14). Subsequently, 11 additional patients infected or colonized with carbapenemase-producing bacteria were identified up to the end of April 2013. The majority of cases (n = 7) were identified in the Edmonton zone, and 4 occurred in the Calgary zone, while 1 case was identified in the Rural South zone. Some of these cases (n = 4) had previously been reported (1417); however, we identified additional patients (n = 8) and performed supplementary characterization (i.e., plasmid analysis and virulence factors) that had not been reported in the original publications.

Screening patients for carbapenemase-producing bacteria.

Surveillance cultures (i.e., from rectal, wound, ostomy, and endotracheal suction sources) were performed in clinical microbiology laboratories from the Edmonton and Calgary zones and were implemented to identify all epidemiologically linked patients who may have become colonized. This process was directed by the infection prevention and control departments on an individual basis at each acute-care center in Edmonton and Calgary and formed part of the contact tracing and unit-wide prevalence screening procedures. No screenings of environmental or health care workers were performed.

Screening swabs obtained from patients were placed into a Copan M40 Transystem containing Amies gel transport medium. Stool and endotracheal suction specimens were submitted in sterile containers without transport medium. The Centers for Disease Control and Prevention (CDC) (Atlanta, GA) protocol was used to screen for carbapenemase-producing Gram-negative bacteria (18).

Antimicrobial susceptibilities.

Antimicrobial susceptibility was determined with MicroScan NEG MIC 38 panels (Siemens, Burlington, ON). The MICs of the following drugs were determined: amoxicillin-clavulanic acid (AMC), piperacillin-tazobactam (TZP), cefoxitin (FOX), ceftriaxone (CRO), ceftazidime (CAZ), aztreonam, (ATM), imipenem (IPM), meropenem (MER), ertapenem (ERT), amikacin (AMK), gentamicin (GEN), tobramycin (TOB), ciprofloxacin (CIP), trimethoprim-sulfamethoxazole (SXT), and tigecycline (TIM). Additional susceptibility tests for colistin (CST) were performed using Etest methodology according to the manufacturer's instructions (bioMérieux, Marcy l'Etoile, France). Throughout this study, results were interpreted using the 2012 CLSI criteria for broth dilution (19). The European Committee for Antimicrobial Susceptibility Testing (EUCAST) breakpoints (i.e., for K. pneumoniae and E. coli) were used for CST and the FDA breakpoint was used for TIM.

β-Lactamase identification.

The presence of carbapenemase was determined with the modified Hodge test (19) and the Mastdiscs ID inhibitor combination disks (20) (Mast Group, Ltd., Merseyside, United Kingdom). PCR amplification and sequencing for blaSHV, blaTEM, blaCTX-M, blaCMY, blaKPC, blaVIM, blaIMP, blaNDM, blaOXA-48-like, blaOXA23-like, blaOXA24-like, blaOXA51-like, and blaOXA58-like were carried out on the isolates with a GeneAmp 9700 ThermoCycler instrument (Applied Biosystems, Norwalk, CT) using PCR conditions and primers as previously described (6, 14, 2124). The presence of ISABA125 and bleMBL among blaNDM-positive bacteria was detected using PCR conditions and primers as previously described (6), while the different Tn4401 isoforms (i.e., a, b, or c) were identified among the blaKPC genes according to the method of Cuzon and colleagues (25).

Plasmid-mediated quinolone resistance determinants.

The amplification of the qnrA, qnrS, and qnrB genes was undertaken with a multiplex PCR (26). AAC(6′)-Ib and qepA were amplified in a separate PCR using primers and conditions as previously described (27, 28). The variant aac(6′)-Ib-cr was further identified by digestion with BstF5I (New England BioLabs, Ipswich, MA).

16S rRNA methylation.

The amplification of genes encoding 16 RNA methylases was determined as described previously (29, 30).

Multilocus sequencing typing.

Multilocus sequencing typing (MLST) on the K. pneumoniae was performed using seven conserved housekeeping genes (gapA, infB, mdh, pgi, phoE, rpoB, and tonB) as previously described (31). MLST was performed on the E. coli using seven conserved housekeeping genes (adk, fumC, gyrB, icd, mdh, purA, and recA). A detailed protocol of the MLST procedure, including allelic type and sequence type (ST) assignment methods, is available at the MLST Databases at the Environmental Research Institute (ERI), University College Cork website (http://mlst.ucc.ie/mlst/dbs/Ecoli). MLST was performed on the A. baumannii using seven conserved housekeeping genes (cpn60, fusA, gltA, pyrG, recA, rplB, and rpoB). A detailed protocol of the MLST procedure, including allelic type and sequence type (ST) assignment methods, is available at the Pasteur MLST databases (http://www.pasteur.fr/recherche/genopole/PF8/mlst/primers_Abaumannii.html).

Plasmid analysis.

Plasmid sizes on the Enterobacteriaceae were determined as previously described (32) and assigned to plasmid incompatibility groups by PCR-based replicon typing (33, 34). Plasmid addiction systems were determined using PCR as described before (35). Conjugation experiments were performed by mating-out assays with nutrient agar containing meropenem (MER) (1 μg/ml) and using E. coli J53 (azide, 100 μg/ml) as the recipient.

Virulence factors for E. coli and K. pneumoniae.

We assessed the presence of extraintestinal pathogenic E. coli (ExPEC)-associated virulence genes and the housekeeping gene uidA (β-glucuronidase) for E. coli by multiplex PCR (36). These included the following: F10 papA (P fimbriae subunit variant), papACEFG (genes of the P fimbriae operon), sfa/foc (S or F1C fimbriae), focG (F1C fimbriae adhesin), iha (adhesion siderophore), fimH (type 1 fimbriae), tsh (temperature-sensitive hemagglutinin), hra (heat-resistant agglutinin), afa/dra (Dr-binding adhesins), hlyD (α-hemolysin), sat (secreted autotransporter toxin), pic, (serine protease), vat (vacuolating toxin), astA (enteroaggregative E. coli toxin), cnF1 (cytotoxic necrotizing factor), iroN (salmochelin [siderophore] receptor), fyuA (yersiniabactin [siderophore] receptor), ireA (siderophore receptor), iutA (aerobactin [siderophore] receptor), kpsM II (group 2 capsule), K1, K2, and K5 (group 2 capsule variants), kpsM III (group 3 capsule), usp (uropathogenic-specific protein), traT (serum resistance-associated), ompT (outer membrane protease T), iss (increased serum survival), H7 fliC (flagellin variant), and malX (pathogenicity island marker). Isolates were defined as ExPEC if positive for ≥2 of papA and/or papC (P fimbriae major subunit and assembly), sfa/focDE (S and F1C fimbriae), afa/draBC (Dr-binding adhesins), and kpsM II (group 2 capsule).

The PCR methods described by Brisse et al. were used to determine the presence of virulence genes that have previously been associated with virulence in K. pneumoniae (37). These included the following: uge (encoding UDP galacturonate 4-epimerase), wabG (involved in the biosynthesis of the outer core lipopolysaccharide), ureA (related to the urease operon), magA (mucoviscosity-associated gene A), mrkD (type 3 fimbriae adhesion), allS (activator of the allantoin regulon), kfuBC (iron-uptake system), rpmA (regulator of mucoid phenotype), and fimH (fimbrial gene encoding type 1 fimbrial adhesion).

RESULTS

Patients and bacteria.

During the 3-year period (April 2010 until April 2013), 17 carbapenemase-producing bacteria were isolated from 12 patients with a history of recent travel outside Canada. The details of the patients (including the clinical presentation and country visited) are shown in Table 1. India (n = 9) was by far the most common country visited, followed by Greece (n = 1), Israel (n = 1), and Ecuador (n = 1). The majority of patients presented with urinary tract infections (UTIs). All of them had contact with the health care system while traveling abroad (i.e., were admitted to hospitals), and 10 were admitted to a local hospital within 7 days from their return to Alberta. Secondary spread occurred in 1 case, causing the death of another patient in the same unit (15).

TABLE 1.

The clinical features of patients infected or colonized with travel-related carbapenemase-producing bacteria

Patient no. Isolate(s) Age (yr) Gendera Travel date (mo/yr)b Country visited Admission on return Secondary spread Clinical entity Reference or source
1 E. coli MH01 32 M 4/2010 India (hospitalized in medical ward due to diabetic crisis) Yes (medical ward for UTI management) No UTIc 14
2 K. pneumoniae KpCG01 52 F 2/2011 India (hospitalized in surgical ward for minor surgical procedure) No No UTI 16
3 K. pneumoniae NT11-19 21 M 5/2011 India (hospitalized in surgical ward due to gunshot wound) Yes (surgical ward for treatment of cellulitis) No Cellulitis (wound leg) This study
4 C. freundii NT11-22 87 M 6/2011 India (hospitalized in medical ward due to hypertensive crisis) Yes (medical ward for hypertensive control) No Colonized (rectal) This study
5 K. pneumoniae KpCG02 82 M 11/2011 Greece (hospitalized in medical ward with urinary obstruction) No No UTI 17
6 K. pneumoniae KpCG03 61 M 11/2012 India (hospitalized in urology ward for placement of urinary catheter) Yes (urology ward for UTI management) No UTI This study
7 E. coli RN12-40 52 M 6/2012 India (hospitalized in ICU ward due to trauma and blood transfusion) Yes (surgical ward for management of trauma) No Colonized (rectal) This study
8 E. coli RN12-50, K. pneumoniae RN12-59 91 F 7/2012 India (hospitalized in medical ward due to congestive heart failure) Yes (medical ward for management of UTI) No UTI This study
9 E. coli EC01, K. pneumoniae KP01, A. baumannii AB01, K. pneumoniae KP02 62 F 3/2013 India (hospitalized in surgical ward and ICU due to trauma) Yes (surgical ward treatment of cellulitis) Yes Cellulitis (wound leg), colonized (rectal) (15)
10 P. rettgeri UR53778, K. pneumoniae KPY18268 83 F 3/2013 India (hospitalized in medical ward due to UTI) Yes (medical ward for management of UTI) No UTI This study
11 K. pneumoniae M2800 38 M 4/2012 Israel (hospitalized in surgical ward due to trauma) Yes (surgical ward for management of trauma) No Colonized (rectal) This study
12 E. cloacae S629 27 M 1/2011 Ecuador (hospitalized in ICU and surgical ward due to trauma) Yes (surgical ward for management of trauma) No Cellulitis (wound hip) This study
a

M, male; F, female.

b

Return date to Alberta. All patients received antibiotics while in foreign hospitals.

c

UTI, urinary tract infection.

The carbapenemase-producing bacteria (n = 17) consisted of K. pneumoniae (n = 9), E. coli (n = 4), and 1 each of Enterobacter cloacae, Citrobacter freundii, Providencia rettgeri, and A. baumannii (Table 1). All of the isolates were nonsusceptible (NS) (i.e., intermediate or resistant) to AMC, TZP, FOX, CRO, CAZ, ATM, IPM, MER, ERT, CIP, and SXT; 14 (82%) were NS to GEN, 15 (88%) to TOB, 11 (65%) to AMK, and 3 (18%) to TIM. All of the isolates remained susceptible to CST.

Active surveillance cultures.

The clinical microbiology laboratories in Edmonton and Calgary during the 3-year period received 557 screening specimens from 227 patients with a positive rate of 1.1%. This was directed by the infection prevention and control departments on an individual basis for each acute-care center in Edmonton and Calgary and formed part of the process of contact tracing and unit-wide prevalence screening.

β-Lactamases.

The majority (n = 10) of the Enterobacteriaceae tested positive with the modified Hodge test using MEM. Mastdiscs ID inhibitor combination disks indicated that 12 isolates produced metallo-β-lactamase (MBL),while 4 produced class A carbapenemases. A. baumannii tested positive with an MBL Etest and the modified Hodge test using IPM as the substrate. PCR results showed that the Enterobacteriaceae isolates were positive for blaKPC, blaNDM, blaCTX-M, blaSHV, blaTEM, blaCMY, and blaOXA-48-like, and sequencing identified blaTEM as TEM-1, blaKPC as KPC-2 or KPC-3, blaNDM as NDM-1, blaCTX-M as CTX-M-15, blaSHV as SHV-12, blaCMY as CMY-16, and bla48-like as OXA-181 (refer to Table 2 for details). The A. baumannii isolate was positive for blaOXA-23-like and blaOXA-51, and sequencing identified blaOXA-23-like as OXA-23 (Table 2).

TABLE 2.

Molecular characteristics of bacteria with carbapenemases

Isolate MLST β-Lactamases 16S RNA methylase(s) PMQRa determinants Plasmids carrying blaNDM-1 or blaKPC genes
ISAba125 bleMBL Tn4401 isoform
Size (kb) Replicon typing Addiction system(s)b
K. pneumoniae KpCG01 ST340 NDM-1, SHV-12, CTX-M-15, TEM-1 armA, rmtC aac(6′)-Ib-cr 150 FIIk ccdA/B + + NDc
K. pneumoniae NT11-19 ST147 NDM-1, CTX-M-15, TEM-1, OXA-30 rmtF aac(6′)-Ib-cr, qnrB 120 L/M pemK, vagC/D + ND
K. pneumoniae KpCG02 ST258 KPC-2, SHV-12, TEM-1 Negd Neg 120 FIIk vagC/D ND ND a
K. pneumoniae KpCG03 ST147 KPC-2, TEM-1 armA aac(6′)-Ib-cr, qnrB 110 FIIk vagC/D ND ND b
K. pneumoniae RN12-59 ST15 NDM-1, CTX-M-15, CMY-16, TEM-1 rmtC, rmfF qnrS 150 A/C pemK, srnB/C + + ND
K. pneumoniae KP01 ST972 NDM-1, CTX-M-15, OXA-181, TEM-1 rmtF aac(6′)-Ib-cr, qnrS 150 NTe vagC/D + + ND
K. pneumoniae KP02 ST16 NDM-1, CTX-M-15, TEM-1 rmtF aac(6′)-Ib-cr, qnrB 120 FIIk pemK + ND
K. pneumoniae KPY18268 ST147 NDM-1, CTX-M-15, OXA-181, TEM-1 armA, rmtF qnrB 180 A/C vagC/D + + ND
K. pneumoniae M2800 ST512 KPC-3, TEM-1 armA Neg 110 FIIk vagC/D ND ND a
E. coli MH01 ST101 NDM-1, CTX-M-15, TEM-1 armA, rmtC Neg 80 A/C pemK, ccdA/B, vagC/D + + ND
E. coli RN12-40 ST365 NDM-1, CTX-M-15, TEM-1 rmtC, rmtF Neg 180 A/C pemK, relE, Hok/Sok + + ND
E. coli RN12-50 ST405 NDM-1, CTX-M-15, CMY-16, TEM-1 rmtC, rmtF qnrS 150 A/C pemK, srnB/C + + ND
E. coli EC01 ST410 NDM-1, CTX-M-15, TEM-1 rmtF aac(6′)-Ib-cr 80 A/C pemK, vagC/D, Hok/Sok + ND
C. freundii NT11-22 ND NDM-1, CTX-M-15, OXA-30, TEM-1 rmtB, rmtC aac(6′)-Ib-cr, qnrB 180 A/C vagC/D + + ND
P. rettgeri UR53778 ND NDM-1, TEM-1 armA, rmtF qnrB 90 T Neg + + ND
E. cloacae S629 ND KPC-2, TEM-1 Neg qnrA 120 L/M ccdA/B ND ND b
A. baumannii AB01 ST10 OXA-23, OXA-51-like armA aac(6′)-Ib-cr ND ND ND ND ND ND
a

PMQR, plasmid-mediated quinolone resistance determinants.

b

Addiction systems, pemKI, plasmid emergency maintenance; ccdA/B, coupled cell division locus; relE, relaxed control of stable RNA synthesis; parD/E and vagC/D, virulence-associated proteins; Hok/Sok, pndA/C, and srnB/C, plasmid antisense RNA-regulated systems.

c

ND, not done.

d

Neg, negative.

e

NT, untypeable.

Molecular characterization.

MLST identified the E. coli isolates as ST101, ST365, ST405, and ST410, while the K. pneumoniae isolates belonged to ST15, ST16, ST147, ST258, ST340, ST512, and ST972 (Table 2). MLST identified the A. baumannii isolate as ST10. The presence of the different plasmid-mediated quinolone resistance determinants, 16S rRNA methylases, ISABA125, bleMBL (among NDM-producers), and the different Tn4401 isoforms (among KPC producers) is shown in Table 2.

Plasmid studies.

The Enterobacteriaceae contained several plasmids ranging from 20 kb to 250 kb in size. The mating-out assays with E. coli J53 produced transconjugants with plasmids that ranged from 80 kb to 180 kb in size (Table 2). PCR for plasmid incompatibility groups identified various scaffolds with the blaNDM-1 genes that belonged to IncA/C, IncL/M, IncF, and untypeable, while the blaKPCs belonged to IncF and IncL/M (Table 2). The IncF incompatibility group contained the FIIk replicon. The addiction factors associated with the different plasmids are shown in Table 2.

Virulence factors.

Among the K. pneumoniae, ST147, ST258, ST340, ST512, and ST972 were positive for mrkD, fimH, uge, wabG, and ureA, while ST15 and ST16 were positive for kfuBC mrkD, fimH, uge, wabG, and ureA. Among the E. coli, ST101 and ST365 were positive for fimH, hra, fyuA, and uidA and ST410 was positive for fimH, hra, iutA, traT, and uidA, while ST405 was positive for fimH, kpsIII, PAI, iutA, fyuA, ompT, kii, PapC, traT, and uidA.

DISCUSSION

The easy access of air and ground transportation is making it possible for people to travel to different countries and continents in a matter of hours or days, either as tourists (medical, business, study, or recreational), immigrants, refugees, asylum seekers, or migrant workers. Overseas travel, as a risk factor for the acquisition of infections due to antimicrobial resistant organisms, has recently been described for infections due to CTX-M-producing E. coli, as well as for various carbapenemase-producing Gram-negative bacteria, including the NDMs and KPCs (38). We describe the characteristics of Alberta patients with carbapenemase-producing Gram-negative bacteria over a 3-year period, which were linked to recent overseas travel outside Canada. Our results show that NDM-producing K. pneumoniae strains, belonging to a variety of sequence types with different plasmid scaffolds, are regularly imported from India into Alberta, Canada. All of the patients included in our study had contact with the health care system while abroad; most patients presented with UTIs and were admitted to hospitals within weeks after their return to Alberta (Table 1). Fortunately, secondary spread occurred only on a single occasion; however, this had devastating consequences, resulting in the death of a different patient due to infection with OXA-23-producing A. baumannii (15). During the 3-year period, we also isolated VIM- and GES-producing P. aeruginosa (12 cases) and SME-producing Serratia marcescens (4 cases) isolates that were not related to recent foreign hospitalization. VIM-producing P. aeruginosa had been previously responsible for nosocomial outbreaks during 2003 to 2004 in the Calgary region (39).

A similar study had previously been published from Finland (40) that documented 25 patients with infection due to carbapenemase-producing Enterobacteriaceae over a 4-year period (2008 to 2011); 18 patients had a history of recent travel outside Finland, with Greece being the country most commonly visited. Since K. pneumoniae with KPCs and VIMs are endemic in Greece (41), it was not surprising that ST258 and ST147 K. pneumoniae with KPCs and VIMs were responsible for 7/18 (39%) of the imported cases in that study (40). NDM-producing bacteria were rarely encountered in the Finnish study.

Alberta has a substantial population of expatriates from the Indian subcontinent who regularly visit friends and family in India. Some of patients described in this study (4/12) were of East Indian decent. The Indian subcontinent is a region where NDM-producing bacteria are endemic (5), and this would explain why NDM-producing bacteria were so prevalent in our study. The molecular characteristics of the NDM-producing isolates [i.e., the presence of CTX-M-15, aac(6′)-Ib-cr, and several RNA methylases, including the recent described rmtF, ISABA125, bleMBL, and IncF or IncA/C plasmids] are very similar to the features previously described in other NDM-producing Enterobacteriaceae that have been linked to travel in the Indian subcontinent (6, 30). We described various narrow- (i.e., IncF) and broad- (i.e., IncA/C) host-range plasmids with different addiction factors associated with blaNDM-1. This supports data from other studies that indicated that the current spread of NDMs is not related to a single type of plasmid or dominant sequence types.

MLST has identified certain epidemic high-risk clones, such as E. coli ST405, K. pneumoniae ST147, and K. pneumoniae ST258, among our collection of travel-related bacteria with carbapenemases (Table 2). The intercontinental dissemination of ST258 had contributed to the worldwide spread of KPC-producing K. pneumoniae (11), while K. pneumoniae ST147 is an emerging sequence type that had been associated with VIMs (4244), KPCs (41), and NDMs (16). We compared the presence of virulence factors among the different K. pneumoniae sequence types, but failed to identify certain factors that might have been responsible for the international success of ST258 and ST147.

E. coli ST405 with various types of CTX-Ms has a worldwide distribution (45) and has recently been described with NDM-4 isolated in Denmark from a patient that had previously been hospitalized in Vietnam (46). It was interesting to note that E. coli ST405 had a significantly higher number of virulence factors than ST101, ST365, and ST410. The exact role of virulence factors in extraintestinal E. coli is unknown, and it is unlikely that one set of factors determines virulence among these isolates (47). However, we previously determined that factors such as sat, iutA, malX, usp, iha, hra, and ompT could possibly play important roles in the dissemination and ecological success of ST405 (48).

The European Centre for Disease Prevention and Control has developed a communication platform tool that is dedicated to antimicrobial resistance (AMR) in health care-associated infections (HAI) and is referred to as the Epidemic Intelligence Information System (EPIS) AMR-HAI. EPIS AMR-HAI allows experts of national risk assessment bodies within the European Union to rapidly and securely exchange information related to microorganisms with emerging antimicrobial resistance that might have a potential impact in the European Union (38). We recommend that similar communication platforms be established in different provinces and states within the North American continent to ensure the timely communication of emerging antimicrobial resistance mechanisms among public health workers, infection control practitioners, and clinical microbiologists.

In order to prevent the introduction and spread of multiresistant bacteria by returning travelers into the health care systems of their respective home countries, it is essential to isolate them on admission and to rapidly identify patients colonized or infected by these bacteria (15, 38, 49). Screening case contacts appears to be an essential surveillance component for detecting asymptomatic carriers or patients infected or colonized with carbapenemase-producing bacteria. Patients colonized or infected with carbapenemase-producing bacteria should be placed on contact precautions. The added value of active screening of such patients on hospital admission depends on the frequency of carriers among incoming patients, and the use of routine screening remains a controversial issue due to several reasons, including costs.

We believe that the presence of carbapenemases among Gram-negative bacteria is an infection control emergency and that the detection of these bacteria in clinical laboratories is a critical step required for appropriate patient management and infection prevention and control efforts. We recommend preemptive contact isolation and careful attention to routine infection control measures (i.e., hand hygiene, cleaning of shared equipment, and effective environmental cleaning) for patients with a recent history (i.e., 6 months) of foreign hospitalization in areas where bacteria that produce carbapenemases are endemic.

ACKNOWLEDGMENTS

This work was supported by a research grant from the Calgary Laboratory Services (10006465).

J.D.D.P. received research funds from Merck and Astra Zeneca. The other authors have no conflicts to declare.

Footnotes

Published ahead of print 5 March 2014

REFERENCES

  • 1.Paterson DL. 2006. Resistance in Gram-negative bacteria: Enterobacteriaceae. Am. J. Infect. Control 34(5 Suppl 1):S20–S28; discussion S64–S73. 10.1016/j.ajic.2006.05.238 [DOI] [PubMed] [Google Scholar]
  • 2.Livermore DM, Woodford N. 2006. The β-lactamase threat in Enterobacteriaceae, Pseudomonas and Acinetobacter. Trends Microbiol. 14:413–420. 10.1016/j.tim.2006.07.008 [DOI] [PubMed] [Google Scholar]
  • 3.Nordmann P, Naas T, Poirel L. 2011. Global spread of carbapenemase-producing Enterobacteriaceae. Emerg. Infect. Dis. 17:1791–1798. 10.3201/eid1710.110655 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 4.Yong D, Toleman MA, Giske CG, Cho HS, Sundman K, Lee K, Walsh TR. 2009. Characterization of a new metallo-β-lactamase gene, bla(NDM-1), and a novel erythromycin esterase gene carried on a unique genetic structure in Klebsiella pneumoniae sequence type 14 from India. Antimicrob. Agents Chemother. 53:5046–5054. 10.1128/AAC.00774-09 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 5.Johnson AP, Woodford N. 2013. Global spread of antibiotic resistance: the example of New Delhi metallo-β-lactamase (NDM)-mediated carbapenem resistance. J. Med. Microbiol. 62:499–513. 10.1099/jmm.0.052555-0 [DOI] [PubMed] [Google Scholar]
  • 6.Poirel L, Dortet L, Bernabeu S, Nordmann P. 2011. Genetic features of blaNDM-1-positive Enterobacteriaceae. Antimicrob. Agents Chemother. 55:5403–5407. 10.1128/AAC.00585-11 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Walsh TR, Weeks J, Livermore DM, Toleman MA. 2011. Dissemination of NDM-1 positive bacteria in the New Delhi environment and its implications for human health: an environmental point prevalence study. Lancet Infect. Dis. 11:355–362. 10.1016/S1473-3099(11)70059-7 [DOI] [PubMed] [Google Scholar]
  • 8.Walther-Rasmussen J, Hoiby N. 2007. Class A carbapenemases. J. Antimicrob. Chemother. 60:470–482. 10.1093/jac/dkm226 [DOI] [PubMed] [Google Scholar]
  • 9.Queenan AM, Bush K. 2007. Carbapenemases: the versatile β-lactamases. Clin. Microbiol. Rev. 20:440–458. 10.1128/CMR.00001-07 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 10.Deshpande LM, Rhomberg PR, Sader HS, Jones RN. 2006. Emergence of serine carbapenemases (KPC and SME) among clinical strains of Enterobacteriaceae isolated in the United States Medical Centers: report from the MYSTIC Program (1999–2005). Diagn. Microbiol. Infect. Dis. 56:367–372. 10.1016/j.diagmicrobio.2006.07.004 [DOI] [PubMed] [Google Scholar]
  • 11.Nordmann P, Cuzon G, Naas T. 2009. The real threat of Klebsiella pneumoniae carbapenemase-producing bacteria. Lancet Infect. Dis. 9:228–236. 10.1016/S1473-3099(09)70054-4 [DOI] [PubMed] [Google Scholar]
  • 12.Health PHSoA. 2013. Carbapenem-resistant organisms. Government of Alberta, Alberta, Canada: http://www.health.alberta.ca/documents/Guidelines-Carbapenem-Resistant-Organisms-2013.pdf [Google Scholar]
  • 13.Peirano G, Ahmed-Bentley J, Fuller J, Rubin JE, Pitout JDD. 2013. Abstr. 53rd Intersci. Conf. Antimicrob. Agents Chemother., abstr C2-905 [Google Scholar]
  • 14.Peirano G, Ahmed-Bentley J, Woodford N, Pitout JD. 2011. New Delhi metallo-β-lactamase from traveler returning to Canada. Emerg. Infect. Dis. 17:240–242. 10.3201/eid1702.101313 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Ahmed-Bentley J, Chandran AU, Joffe AM, French D, Peirano G, Pitout JD. 2013. Gram-negative bacteria that produce carbapenemases causing death attributed to recent foreign hospitalization. Antimicrob. Agents Chemother. 57:3085–3091. 10.1128/AAC.00297-13 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Peirano G, Pillai DR, Pitondo-Silva A, Richardson D, Pitout JD. 2011. The characteristics of NDM-producing Klebsiella pneumoniae from Canada. Diagn. Microbiol. Infect. Dis. 71:106–109. 10.1016/j.diagmicrobio.2011.06.013 [DOI] [PubMed] [Google Scholar]
  • 17.Chan WW, Peirano G, Smyth DJ, Pitout JD. 2013. The characteristics of Klebsiella pneumoniae that produce KPC-2 imported from Greece. Diagn. Microbiol. Infect. Dis. 75:317–319. 10.1016/j.diagmicrobio.2012.12.003 [DOI] [PubMed] [Google Scholar]
  • 18.Centers for Disease Control and Prevention. 2012. CRE toolkit—guidance for the control of carbapenem-resistant Enterobacteriaceae (CRE). Centers for Disease Control and Prevention, Atlanta, GA: http://www.cdc.gov/hai/organisms/cre/cre-toolkit/ [Google Scholar]
  • 19.Clinical and Laboratory Standards Institute. 2012. Performance standards for antimicrobial susceptibility testing: 22nd informational supplement. CLSA document M100-S22 Clinical and Laboratory Standards Institute, Wayne, PA [Google Scholar]
  • 20.Doyle D, Peirano G, Lascols C, Lloyd T, Church DL, Pitout JD. 2012. Laboratory detection of Enterobacteriaceae that produce carbapenemases. J. Clin. Microbiol. 50:3877–3880. 10.1128/JCM.02117-12 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 21.Peirano G, van der Bij AK, Gregson DB, Pitout JD. 2012. Molecular epidemiology over an 11-year period (2000 to 2010) of extended-spectrum β-lactamase-producing Escherichia coli causing bacteremia in a centralized Canadian region. J. Clin. Microbiol. 50:294–299. 10.1128/JCM.06025-11 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Poirel L, Bonnin RA, Nordmann P. 2012. Genetic features of the widespread plasmid coding for the carbapenemase OXA-48. Antimicrob. Agents Chemother. 56:559–562. 10.1128/AAC.05289-11 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 23.Woodford N, Ellington MJ, Coelho JM, Turton JF, Ward ME, Brown S, Amyes SG, Livermore DM. 2006. Multiplex PCR for genes encoding prevalent OXA carbapenemases in Acinetobacter spp. Int. J. Antimicrob. Agents 27:351–353. 10.1016/j.ijantimicag.2006.01.004 [DOI] [PubMed] [Google Scholar]
  • 24.Mataseje LF, Boyd DA, Willey BM, Prayitno N, Kreiswirth N, Gelosia A, Poutanen SM, Low DE, Jenkins SG, Katz K, Mulvey MR. 2011. Plasmid comparison and molecular analysis of Klebsiella pneumoniae harbouring bla(KPC) from New York City and Toronto. J. Antimicrob. Chemother. 66:1273–1277. 10.1093/jac/dkr092 [DOI] [PubMed] [Google Scholar]
  • 25.Cuzon G, Naas T, Truong H, Villegas MV, Wisell KT, Carmeli Y, Gales AC, Venezia SN, Quinn JP, Nordmann P. 2010. Worldwide diversity of Klebsiella pneumoniae that produce β-lactamase blaKPC-2 gene. Emerg. Infect. Dis. 16:1349–1356. 10.3201/eid1609.091389 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 26.Robicsek A, Strahilevitz J, Sahm DF, Jacoby GA, Hooper DC. 2006. qnr prevalence in ceftazidime-resistant Enterobacteriaceae isolates from the United States. Antimicrob. Agents Chemother. 50:2872–2874. 10.1128/AAC.01647-05 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 27.Robicsek A, Strahilevitz J, Jacoby GA, Macielag M, Abbanat D, Park CH, Bush K, Hooper DC. 2006. Fluoroquinolone-modifying enzyme: a new adaptation of a common aminoglycoside acetyltransferase. Nat. Med. 12:83–88. 10.1038/nm1347 [DOI] [PubMed] [Google Scholar]
  • 28.Yamane K, Wachino J, Suzuki S, Arakawa Y. 2008. Plasmid-mediated qepA gene among Escherichia coli clinical isolates from Japan. Antimicrob. Agents Chemother. 52:1564–1566. 10.1128/AAC.01137-07 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 29.Doi Y, Arakawa Y. 2007. 16S ribosomal RNA methylation: emerging resistance mechanism against aminoglycosides. Clin. Infect. Dis. 45:88-94. 10.1086/518605 [DOI] [PubMed] [Google Scholar]
  • 30.Hidalgo L, Hopkins KL, Gutierrez B, Ovejero CM, Shukla S, Douthwaite S, Prasad KN, Woodford N, Gonzalez-Zorn B. 2013. Association of the novel aminoglycoside resistance determinant RmtF with NDM carbapenemase in Enterobacteriaceae isolated in India and the UK. J. Antimicrob. Chemother. 68:1543–1550. 10.1093/jac/dkt078 [DOI] [PubMed] [Google Scholar]
  • 31.Diancourt L, Passet V, Verhoef J, Grimont PA, Brisse S. 2005. Multilocus sequence typing of Klebsiella pneumoniae nosocomial isolates. J. Clin. Microbiol. 43:4178–4182. 10.1128/JCM.43.8.4178-4182.2005 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 32.Boyd DA, Tyler S, Christianson S, McGeer A, Muller MP, Willey BM, Bryce E, Gardam M, Nordmann P, Mulvey MR. 2004. Complete nucleotide sequence of a 92-kilobase plasmid harboring the CTX-M-15 extended-spectrum β-lactamase involved in an outbreak in long-term-care facilities in Toronto, Canada. Antimicrob. Agents Chemother. 48:3758–3764. 10.1128/AAC.48.10.3758-3764.2004 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 33.Carattoli A, Bertini A, Villa L, Falbo V, Hopkins KL, Threlfall EJ. 2005. Identification of plasmids by PCR-based replicon typing. J. Microbiol. Methods 63:219–228. 10.1016/j.mimet.2005.03.018 [DOI] [PubMed] [Google Scholar]
  • 34.Villa L, Garcia-Fernandez A, Fortini D, Carattoli A. 2010. Replicon sequence typing of IncF plasmids carrying virulence and resistance determinants. J. Antimicrob. Chemother. 65:2518–2529. 10.1093/jac/dkq347 [DOI] [PubMed] [Google Scholar]
  • 35.Mnif B, Vimont S, Boyd A, Bourit E, Picard B, Branger C, Denamur E, Arlet G. 2010. Molecular characterization of addiction systems of plasmids encoding extended-spectrum β-lactamases in Escherichia coli. J. Antimicrob. Chemother. 65:1599–1603. 10.1093/jac/dkq181 [DOI] [PubMed] [Google Scholar]
  • 36.Johnson JR, Menard M, Johnston B, Kuskowski MA, Nichol K, Zhanel GG. 2009. Epidemic clonal groups of Escherichia coli as a cause of antimicrobial-resistant urinary tract infections in Canada, 2002 to 2004. Antimicrob. Agents Chemother. 53:2733–2739. 10.1128/AAC.00297-09 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 37.Brisse S, Fevre C, Passet V, Issenhuth-Jeanjean S, Tournebize R, Diancourt L, Grimont P. 2009. Virulent clones of Klebsiella pneumoniae: identification and evolutionary scenario based on genomic and phenotypic characterization. PLoS One 4:e4982. 10.1371/journal.pone.0004982 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 38.van der Bij AK, Pitout JD. 2012. The role of international travel in the worldwide spread of multiresistant Enterobacteriaceae. J. Antimicrob. Chemother. 67:2090–2100. 10.1093/jac/dks214 [DOI] [PubMed] [Google Scholar]
  • 39.Pitout JD, Chow BL, Gregson DB, Laupland KB, Elsayed S, Church DL. 2007. Molecular epidemiology of metallo-β-lactamase-producing Pseudomonas aeruginosa in the Calgary Health Region: emergence of VIM-2-producing isolates. J. Clin. Microbiol. 45:294–298. 10.1128/JCM.01694-06 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 40.Osterblad M, Kirveskari J, Hakanen AJ, Tissari P, Vaara M, Jalava J. 2012. Carbapenemase-producing Enterobacteriaceae in Finland: the first years (2008–11). J. Antimicrob. Chemother. 67:2860–2864. 10.1093/jac/dks299 [DOI] [PubMed] [Google Scholar]
  • 41.Giakkoupi P, Papagiannitsis CC, Miriagou V, Pappa O, Polemis M, Tryfinopoulou K, Tzouvelekis LS, Vatopoulos AC. 2011. An update of the evolving epidemic of blaKPC-2-carrying Klebsiella pneumoniae in Greece (2009–10). J. Antimicrob. Chemother. 66:1510–1513. 10.1093/jac/dkr166 [DOI] [PubMed] [Google Scholar]
  • 42.Papagiannitsis CC, Kotsakis SD, Petinaki E, Vatopoulos AC, Tzelepi E, Miriagou V, Tzouvelekis LS. 2011. Characterization of metallo-β-lactamase VIM-27, an A57S mutant of VIM-1 associated with Klebsiella pneumoniae ST147. Antimicrob. Agents Chemother. 55:3570–3572. 10.1128/AAC.00238-11 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 43.Hasan CM, Turlej-Rogacka A, Vatopoulos AC, Giakkoupi P, Maatallah M, Giske CG. 2013. Dissemination of blaVIM in Greece at the peak of the epidemic of 2005–2006: clonal expansion of Klebsiella pneumoniae clonal complex 147. Clin. Microbiol. Infect. 20:34–37. 10.1111/1469-0691.12187 [DOI] [PubMed] [Google Scholar]
  • 44.Loli A, Tzouvelekis LS, Tzelepi E, Carattoli A, Vatopoulos AC, Tassios PT, Miriagou V. 2006. Sources of diversity of carbapenem resistance levels in Klebsiella pneumoniae carrying blaVIM-1. J. Antimicrob. Chemother. 58:669–672. 10.1093/jac/dkl302 [DOI] [PubMed] [Google Scholar]
  • 45.Woodford N, Turton JF, Livermore DM. 2011. Multiresistant Gram-negative bacteria: the role of high-risk clones in the dissemination of antibiotic resistance. FEMS Microbiol. Rev. 35:736–755. 10.1111/j.1574-6976.2011.00268.x [DOI] [PubMed] [Google Scholar]
  • 46.Jakobsen L, Hammerum AM, Hansen F, Fuglsang-Damgaard D. 2013. An ST405 NDM-4-producing Escherichia coli isolated from a Danish patient previously hospitalized in Vietnam. J. Antimicrob. Chemother. 69:559–560. 10.1093/jac/dkt356 [DOI] [PubMed] [Google Scholar]
  • 47.Dobrindt U. 2005. (Patho-)genomics of Escherichia coli. Int. J. Med. Microbiol. 295:357–371. 10.1016/j.ijmm.2005.07.009 [DOI] [PubMed] [Google Scholar]
  • 48.Van der Bij AK, Peirano G, Pitondo-Silva A, Pitout JD. 2012. The presence of genes encoding for different virulence factors in clonally related Escherichia coli that produce CTX-Ms. Diagn. Microbiol. Infect. Dis. 72:297–302. 10.1016/j.diagmicrobio.2011.12.011 [DOI] [PubMed] [Google Scholar]
  • 49.Rogers BA, Aminzadeh Z, Hayashi Y, Paterson DL. 2011. Country-to-country transfer of patients and the risk of multiresistant bacterial infection. Clin. Infect. Dis. 53:49–56. 10.1093/cid/cir273 [DOI] [PubMed] [Google Scholar]

Articles from Journal of Clinical Microbiology are provided here courtesy of American Society for Microbiology (ASM)

RESOURCES