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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2014 Feb 26;70(Pt 3):m108–m109. doi: 10.1107/S1600536814003912

(E)-1-Ferrocenyl-3-(2-meth­oxy­phen­yl)prop-2-en-1-one

Myrna R Otaño Vega a, Kennett I Rivero a,*, Ingrid Montes González a
PMCID: PMC3998481  PMID: 24764940

Abstract

The structure of the title compound, [Fe(C5H5)(C15H13O2)], consists of a ferrocenyl moiety and a 2-meth­oxy­phenyl group linked through a prop-2-en-1-one spacer in an E conformation. In the ferrocene unit, the substituted cyclo­penta­dienyl (Cps) ring and the unsubstituted cyclo­penta­dienyl ring (Cp) are almost parallel to one another [dihedral angle = 1.78 (14)°], and the Cp and Cps rings are in a gauche conformation. The benzene ring is twisted by 10.02 (14) and 11.38 (11)° with respect to the Cp and Cps rings, respectively. In the crystal, mol­ecules are linked by weak C—H⋯O hydrogen bonds into supra­molecular chains running along the b-axis direction.

Related literature  

For the synthesis, see: Attar et al. (2011); Kumar et al. (2012). For related syntheses and background, see: Liu et al. (2001); Wu et al. (2002); Ji et al. (2003); Maree et al. (2008); Jiao et al. (2009); Cardona et al. (2010). For the biological activity of calcones and chalcone derivatives, see: Wu et al. (2002); Arezki et al. (2009); Nabi & Liu (2011); Zhao & Liu (2012). For related structures, see: Lindeman et al. (1997); Wu et al. (2006); Liu et al. (2008).graphic file with name e-70-0m108-scheme1.jpg

Experimental  

Crystal data  

  • [Fe(C5H5)(C15H13O2)]

  • M r = 346.19

  • Orthorhombic, Inline graphic

  • a = 8.8352 (1) Å

  • b = 11.4047 (1) Å

  • c = 16.1327 (2) Å

  • V = 1625.58 (3) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.93 mm−1

  • T = 296 K

  • 0.22 × 0.17 × 0.12 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2007) T min = 0.821, T max = 0.896

  • 13238 measured reflections

  • 3659 independent reflections

  • 3242 reflections with I > 2σ(I)

  • R int = 0.022

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.026

  • wR(F 2) = 0.065

  • S = 1.05

  • 3658 reflections

  • 209 parameters

  • H-atom parameters constrained

  • Δρmax = 0.21 e Å−3

  • Δρmin = −0.13 e Å−3

  • Absolute structure: Flack (1983), 1523 Friedel pairs

  • Absolute structure parameter: 0.004 (14)

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536814003912/xu5769sup1.cif

e-70-0m108-sup1.cif (19.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814003912/xu5769Isup2.hkl

e-70-0m108-Isup2.hkl (179.4KB, hkl)

CCDC reference: 987910

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C6—H6⋯O1i 0.93 2.48 3.368 (2) 159

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank the Pfizer Pharmaceuticals Fellowship Program, the UPR–RP RISE Program (No. 2R25GM61151), and the Materials Characterization Center (MCC)-UPR Río Piedras.

supplementary crystallographic information

1. Comment

Chalcones occur in nature as precursors of flavonoids and exhibit various biological activities such as anti-cancer, anti-inflammatory, nitric oxide regulation and anti-hyperglycemic agents (Liu et al., 2001). They are traditionally synthesized in the laboratory, via the Claisen–Schmidt condensation carried out in basic or acidic media under homogeneous conditions (Attar et al., 2011). Structural modifications of the chalcone template are readily achieved. Biological activities of chalcones are equally wide ranging, such as: anti-bacterial and anti-hyperglycemic, anti-malarial, anti-HIV, anti-oxidant, and anti-tumor (Wu et al., 2002).

The crystal structure of the title compound reveals that the configuration about the C12═C13 bond corresponds to the (E)-isomer. The majority of the C and O atoms of the substituted cyclopentadienyl ring (Cps) are sp2-hybridized and the conjugation is lost at the methoxy substituent of C19. In the ferrocenyl moiety, the planes formed by the Cp (unsubstituted cyclopentadienyl ring) and Cps are almost parallel. The C atoms in these two rings have adopted a gauche conformation, and the Fe metal center lies closer to the Cps ring. The Fe—Cg and Fe—Cgs distances are 1.658 (2) and 1.644 (2) Å, respectively, where Cg and Cgs are the centroids of Cp and Cps, respectively. The Cg—Fe—Cgs angle is 178.4 (2)°.

2. Experimental

The title compound was synthesized according to the literature procedure (Cardona et al., 2010). An aqueous solution of sodium hydroxide (5%, 2 ml) was added slowly with stirring to acetylferrocene (0.456 g, 0.002 mol). Then, 2-methoxybenzaldehyde (0.272 g, 0.002 mol) in ethanol (2 ml). The resulting mixture was stirred at room temperature for 2 h. The dark-orange-red precipitated solid was filtered off, washed with cold water and ethanol, dried and recrystallized from a mixture of acetone:water (yield, 84%; M·P. 144–145 °C). Dark violet crystals, suitable for X-ray diffraction, were obtained by the slow evaporation of a 1:1 (v/v) acetone:water solution of the title compound at room temperature over a period of 1 day. NMR analyses were performed on a Bruker AV-500 spectrometer by using CDCl3 99.9% pure as a solvent and Me4Si as external standard.1H-NMR (δ in p.p.m., CDCl3): 3.90 (3H, s), 4.20 (5H, s), 4.60 (2H, s), 4.90 (2H, s), 7.05 (1H, d), 6.95, 7.25, 7.35, 8.10 (4H, dd, d,d, dd), 7.65 (1H, d). 13C-NMR (δ in p.p.m., CDCl3): 55.5, 69.7, 70.1, 72.5, 80.9, 111.2, 123.9, 120.7, 124.7, 128.9, 131.2, 136.3, 158.7, 193.5.

3. Refinement

H atoms were placed in calculated positions with C—H = 0.93–0.96 Å and refined in riding mode with Uiso(H) = 1.5Ueq(C) for methyl H atoms and 1.2Ueq(C) for the others.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound.

Crystal data

[Fe(C5H5)(C15H13O2)] Dx = 1.415 Mg m3
Mr = 346.19 Melting point: 417 K
Orthorhombic, P212121 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2ab Cell parameters from 6681 reflections
a = 8.8352 (1) Å θ = 2.9–26.8°
b = 11.4047 (1) Å µ = 0.93 mm1
c = 16.1327 (2) Å T = 296 K
V = 1625.58 (3) Å3 Prism, red
Z = 4 0.22 × 0.17 × 0.12 mm
F(000) = 720

Data collection

Bruker APEXII CCD diffractometer 3659 independent reflections
Radiation source: fine-focus sealed tube 3242 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.022
φ and ω scans θmax = 27.5°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2007) h = −10→11
Tmin = 0.821, Tmax = 0.896 k = −14→14
13238 measured reflections l = −20→20

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.026 H-atom parameters constrained
wR(F2) = 0.065 w = 1/[σ2(Fo2) + (0.0341P)2 + 0.0721P] where P = (Fo2 + 2Fc2)/3
S = 1.05 (Δ/σ)max = 0.002
3658 reflections Δρmax = 0.21 e Å3
209 parameters Δρmin = −0.13 e Å3
0 restraints Absolute structure: Flack (1983), 1523 Friedel pairs
Primary atom site location: structure-invariant direct methods Absolute structure parameter: 0.004 (14)

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.4177 (3) 0.4890 (3) 0.63912 (15) 0.0776 (7)
H1 0.3408 0.4925 0.5999 0.093*
C2 0.4854 (3) 0.5845 (2) 0.6769 (2) 0.0889 (10)
H2 0.4622 0.6629 0.6673 0.107*
C3 0.5963 (3) 0.5420 (3) 0.7327 (2) 0.0943 (9)
H3 0.6584 0.5869 0.7668 0.113*
C4 0.5945 (3) 0.4190 (3) 0.72679 (18) 0.0851 (8)
H4 0.6566 0.3679 0.7561 0.102*
C5 0.4835 (3) 0.3867 (2) 0.66940 (16) 0.0754 (7)
H5 0.4582 0.3106 0.6542 0.091*
C6 0.2005 (2) 0.39864 (16) 0.80793 (12) 0.0476 (4)
H6 0.1503 0.3369 0.7822 0.057*
C7 0.3176 (2) 0.3888 (2) 0.86594 (13) 0.0581 (5)
H7 0.3582 0.3188 0.8854 0.070*
C8 0.3639 (2) 0.5015 (2) 0.88996 (12) 0.0623 (5)
H8 0.4399 0.5188 0.9279 0.075*
C9 0.2754 (2) 0.58371 (17) 0.84677 (12) 0.0496 (4)
H9 0.2831 0.6648 0.8510 0.060*
C10 0.17163 (19) 0.52116 (16) 0.79522 (10) 0.0414 (4)
C11 0.06791 (18) 0.57653 (15) 0.73633 (12) 0.0437 (4)
C12 −0.00329 (19) 0.50151 (17) 0.67329 (12) 0.0499 (4)
H12 0.0185 0.4217 0.6729 0.060*
C13 −0.0981 (2) 0.54437 (16) 0.61665 (11) 0.0456 (4)
H13 −0.1167 0.6246 0.6188 0.055*
C14 −0.17574 (19) 0.47877 (17) 0.55157 (10) 0.0442 (4)
C15 −0.1691 (3) 0.35727 (18) 0.54580 (13) 0.0583 (5)
H15 −0.1111 0.3156 0.5838 0.070*
C16 −0.2464 (3) 0.2974 (2) 0.48517 (15) 0.0749 (7)
H16 −0.2408 0.2160 0.4829 0.090*
C17 −0.3305 (3) 0.3563 (2) 0.42873 (15) 0.0774 (7)
H17 −0.3814 0.3152 0.3874 0.093*
C18 −0.3413 (3) 0.4771 (2) 0.43210 (14) 0.0698 (6)
H18 −0.3999 0.5173 0.3936 0.084*
C19 −0.2647 (2) 0.53742 (19) 0.49291 (12) 0.0556 (5)
C20 −0.3610 (4) 0.7215 (2) 0.44401 (18) 0.1102 (12)
H20A −0.3270 0.7087 0.3882 0.165*
H20B −0.3554 0.8036 0.4568 0.165*
H20C −0.4638 0.6953 0.4493 0.165*
O1 0.04308 (17) 0.68202 (11) 0.74047 (9) 0.0631 (4)
O2 −0.2676 (2) 0.65768 (14) 0.49974 (10) 0.0782 (5)
Fe1 0.38821 (3) 0.48092 (2) 0.764458 (16) 0.04441 (8)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0711 (15) 0.106 (2) 0.0554 (13) 0.0059 (15) 0.0217 (11) 0.0055 (13)
C2 0.095 (2) 0.0698 (16) 0.102 (2) −0.0105 (15) 0.055 (2) 0.0035 (15)
C3 0.0524 (14) 0.127 (3) 0.103 (2) −0.0362 (15) 0.0215 (18) −0.0322 (19)
C4 0.0488 (13) 0.115 (2) 0.0920 (19) 0.0237 (13) 0.0192 (17) −0.0047 (16)
C5 0.0735 (17) 0.0777 (16) 0.0751 (17) 0.0027 (13) 0.0224 (15) −0.0200 (13)
C6 0.0461 (11) 0.0452 (9) 0.0514 (11) −0.0029 (8) 0.0027 (9) 0.0070 (8)
C7 0.0579 (12) 0.0656 (12) 0.0507 (12) 0.0123 (10) −0.0015 (10) 0.0139 (10)
C8 0.0543 (12) 0.0874 (16) 0.0454 (10) 0.0093 (11) −0.0110 (9) −0.0073 (10)
C9 0.0504 (11) 0.0512 (10) 0.0473 (10) 0.0025 (9) 0.0012 (9) −0.0115 (8)
C10 0.0353 (8) 0.0479 (9) 0.0409 (8) −0.0001 (8) 0.0049 (7) 0.0008 (8)
C11 0.0371 (9) 0.0465 (9) 0.0474 (10) 0.0036 (6) 0.0046 (8) 0.0028 (8)
C12 0.0429 (10) 0.0527 (11) 0.0540 (10) 0.0055 (8) −0.0043 (8) 0.0021 (8)
C13 0.0378 (9) 0.0516 (10) 0.0475 (10) 0.0007 (8) 0.0034 (8) 0.0074 (7)
C14 0.0371 (8) 0.0533 (9) 0.0423 (9) −0.0015 (8) 0.0048 (7) 0.0031 (8)
C15 0.0647 (13) 0.0588 (12) 0.0514 (12) −0.0030 (10) 0.0029 (10) 0.0065 (9)
C16 0.101 (2) 0.0594 (13) 0.0644 (15) −0.0176 (12) 0.0059 (15) −0.0008 (11)
C17 0.0956 (19) 0.0832 (17) 0.0535 (13) −0.0280 (14) −0.0101 (14) −0.0068 (12)
C18 0.0681 (13) 0.0886 (16) 0.0525 (12) −0.0038 (13) −0.0143 (10) 0.0043 (12)
C19 0.0510 (11) 0.0675 (13) 0.0484 (11) 0.0012 (10) −0.0038 (9) 0.0011 (9)
C20 0.152 (3) 0.0934 (19) 0.0852 (19) 0.040 (2) −0.044 (2) 0.0080 (15)
O1 0.0719 (9) 0.0497 (7) 0.0677 (9) 0.0134 (6) −0.0116 (8) 0.0000 (7)
O2 0.1015 (14) 0.0633 (9) 0.0698 (10) 0.0214 (9) −0.0350 (10) −0.0010 (7)
Fe1 0.03514 (12) 0.04845 (13) 0.04965 (14) −0.00074 (10) 0.00249 (11) −0.00507 (10)

Geometric parameters (Å, º)

C1—C2 1.385 (4) C9—Fe1 2.0326 (18)
C1—C5 1.391 (3) C9—H9 0.9300
C1—Fe1 2.041 (2) C10—C11 1.463 (3)
C1—H1 0.9300 C10—Fe1 2.0294 (17)
C2—C3 1.416 (4) C11—O1 1.225 (2)
C2—Fe1 2.032 (3) C11—C12 1.470 (3)
C2—H2 0.9300 C12—C13 1.332 (2)
C3—C4 1.406 (4) C12—H12 0.9300
C3—Fe1 2.032 (2) C13—C14 1.460 (3)
C3—H3 0.9300 C13—H13 0.9300
C4—C5 1.398 (3) C14—C15 1.390 (3)
C4—Fe1 2.047 (2) C14—C19 1.400 (3)
C4—H4 0.9300 C15—C16 1.374 (3)
C5—Fe1 2.053 (2) C15—H15 0.9300
C5—H5 0.9300 C16—C17 1.354 (3)
C6—C7 1.399 (3) C16—H16 0.9300
C6—C10 1.435 (3) C17—C18 1.382 (3)
C6—Fe1 2.0306 (18) C17—H17 0.9300
C6—H6 0.9300 C18—C19 1.376 (3)
C7—C8 1.404 (3) C18—H18 0.9300
C7—Fe1 2.043 (2) C19—O2 1.376 (3)
C7—H7 0.9300 C20—O2 1.421 (3)
C8—C9 1.406 (3) C20—H20A 0.9600
C8—Fe1 2.0496 (19) C20—H20B 0.9600
C8—H8 0.9300 C20—H20C 0.9600
C9—C10 1.429 (3)
C2—C1—C5 109.0 (2) C15—C14—C13 122.62 (17)
C2—C1—Fe1 69.79 (15) C19—C14—C13 120.33 (17)
C5—C1—Fe1 70.60 (14) C16—C15—C14 121.5 (2)
C2—C1—H1 125.5 C16—C15—H15 119.3
C5—C1—H1 125.5 C14—C15—H15 119.3
Fe1—C1—H1 125.7 C17—C16—C15 120.3 (2)
C1—C2—C3 108.0 (2) C17—C16—H16 119.8
C1—C2—Fe1 70.46 (14) C15—C16—H16 119.8
C3—C2—Fe1 69.58 (15) C16—C17—C18 120.4 (2)
C1—C2—H2 126.0 C16—C17—H17 119.8
C3—C2—H2 126.0 C18—C17—H17 119.8
Fe1—C2—H2 125.5 C19—C18—C17 119.5 (2)
C4—C3—C2 106.9 (2) C19—C18—H18 120.3
C4—C3—Fe1 70.41 (14) C17—C18—H18 120.3
C2—C3—Fe1 69.63 (13) O2—C19—C18 123.08 (19)
C4—C3—H3 126.6 O2—C19—C14 115.64 (17)
C2—C3—H3 126.6 C18—C19—C14 121.3 (2)
Fe1—C3—H3 125.0 O2—C20—H20A 109.5
C5—C4—C3 108.4 (3) O2—C20—H20B 109.5
C5—C4—Fe1 70.30 (13) H20A—C20—H20B 109.5
C3—C4—Fe1 69.26 (14) O2—C20—H20C 109.5
C5—C4—H4 125.8 H20A—C20—H20C 109.5
C3—C4—H4 125.8 H20B—C20—H20C 109.5
Fe1—C4—H4 126.2 C19—O2—C20 118.09 (19)
C1—C5—C4 107.7 (3) C10—Fe1—C6 41.40 (7)
C1—C5—Fe1 69.67 (13) C10—Fe1—C3 146.85 (11)
C4—C5—Fe1 69.82 (13) C6—Fe1—C3 169.96 (12)
C1—C5—H5 126.1 C10—Fe1—C2 115.91 (10)
C4—C5—H5 126.1 C6—Fe1—C2 148.66 (12)
Fe1—C5—H5 126.0 C3—Fe1—C2 40.79 (11)
C7—C6—C10 107.77 (18) C10—Fe1—C9 41.18 (7)
C7—C6—Fe1 70.39 (12) C6—Fe1—C9 68.92 (8)
C10—C6—Fe1 69.26 (10) C3—Fe1—C9 114.23 (10)
C7—C6—H6 126.1 C2—Fe1—C9 109.02 (10)
C10—C6—H6 126.1 C10—Fe1—C1 110.65 (9)
Fe1—C6—H6 125.8 C6—Fe1—C1 117.87 (10)
C6—C7—C8 109.06 (18) C3—Fe1—C1 67.62 (11)
C6—C7—Fe1 69.43 (11) C2—Fe1—C1 39.76 (11)
C8—C7—Fe1 70.19 (12) C9—Fe1—C1 133.16 (10)
C6—C7—H7 125.5 C10—Fe1—C7 68.43 (8)
C8—C7—H7 125.5 C6—Fe1—C7 40.18 (8)
Fe1—C7—H7 126.5 C3—Fe1—C7 130.91 (13)
C7—C8—C9 108.18 (17) C2—Fe1—C7 170.14 (12)
C7—C8—Fe1 69.69 (12) C9—Fe1—C7 67.87 (8)
C9—C8—Fe1 69.21 (11) C1—Fe1—C7 148.88 (10)
C7—C8—H8 125.9 C10—Fe1—C4 171.98 (10)
C9—C8—H8 125.9 C6—Fe1—C4 132.11 (11)
Fe1—C8—H8 126.8 C3—Fe1—C4 40.33 (12)
C8—C9—C10 108.20 (17) C2—Fe1—C4 67.53 (12)
C8—C9—Fe1 70.51 (11) C9—Fe1—C4 146.05 (11)
C10—C9—Fe1 69.29 (10) C1—Fe1—C4 66.89 (11)
C8—C9—H9 125.9 C7—Fe1—C4 109.43 (10)
C10—C9—H9 125.9 C10—Fe1—C8 68.51 (7)
Fe1—C9—H9 125.9 C6—Fe1—C8 68.04 (8)
C9—C10—C6 106.80 (16) C3—Fe1—C8 107.73 (11)
C9—C10—C11 124.36 (17) C2—Fe1—C8 131.63 (11)
C6—C10—C11 128.62 (17) C9—Fe1—C8 40.28 (8)
C9—C10—Fe1 69.53 (10) C1—Fe1—C8 170.76 (11)
C6—C10—Fe1 69.35 (11) C7—Fe1—C8 40.11 (9)
C11—C10—Fe1 121.96 (12) C4—Fe1—C8 115.22 (10)
O1—C11—C10 120.04 (18) C10—Fe1—C5 133.45 (9)
O1—C11—C12 122.19 (17) C6—Fe1—C5 110.56 (10)
C10—C11—C12 117.77 (15) C3—Fe1—C5 67.68 (11)
C13—C12—C11 121.99 (18) C2—Fe1—C5 67.16 (10)
C13—C12—H12 119.0 C9—Fe1—C5 172.29 (10)
C11—C12—H12 119.0 C1—Fe1—C5 39.73 (10)
C12—C13—C14 126.90 (18) C7—Fe1—C5 117.05 (11)
C12—C13—H13 116.6 C4—Fe1—C5 39.88 (10)
C14—C13—H13 116.6 C8—Fe1—C5 147.23 (10)
C15—C14—C19 117.04 (18)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C6—H6···O1i 0.93 2.48 3.368 (2) 159

Symmetry code: (i) −x, y−1/2, −z+3/2.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: XU5769).

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536814003912/xu5769sup1.cif

e-70-0m108-sup1.cif (19.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814003912/xu5769Isup2.hkl

e-70-0m108-Isup2.hkl (179.4KB, hkl)

CCDC reference: 987910

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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