Abstract
In the title compound, C8H9NO4, the pyrrolidine ring (r.m.s. deviation 0.014 Å) is almost normal to the mean plane of the propenoate group (r.m.s deviation 0.028 Å), making a dihedral angle of 86.58 (4)°. In the crystal, molecules are linked via pairs of weak C—H⋯O hydrogen bonds, forming inversion dimers which stack along the c axis.
Related literature
For synthetic procedures, see: Batz et al. (1972 ▶); Rathfon & Tew (2008 ▶). For free radical polymerization and controlled free radical (ATRP) polymerizations to form homo- and copolymers, see: Batz et al. (1972 ▶); Rathfon & Tew (2008 ▶). For a background on post-polymerization modification to create functional polymers, see: Gauthier et al. (2009 ▶). For a review of topochemical polymerization in crystals, see: Matsumoto (2003 ▶). For a disscussion addressing the conformation of methyl substituents on alkenes, see: Deslongchamps & Deslongchamps (2011 ▶).
Experimental
Crystal data
C8H9NO4
M r = 183.16
Monoclinic,
a = 9.6137 (8) Å
b = 10.9317 (9) Å
c = 8.4911 (7) Å
β = 102.522 (2)°
V = 871.14 (12) Å3
Z = 4
Mo Kα radiation
μ = 0.11 mm−1
T = 173 K
0.24 × 0.14 × 0.07 mm
Data collection
Bruker Kappa APEXII DUO diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.884, T max = 1.000
20817 measured reflections
1595 independent reflections
1353 reflections with I > 2σ(I)
R int = 0.042
Refinement
R[F 2 > 2σ(F 2)] = 0.036
wR(F 2) = 0.085
S = 1.06
1595 reflections
119 parameters
H-atom parameters constrained
Δρmax = 0.19 e Å−3
Δρmin = −0.17 e Å−3
Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008 ▶).
Supplementary Material
Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814005170/zq2217sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814005170/zq2217Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814005170/zq2217Isup3.cdx
Supporting information file. DOI: 10.1107/S1600536814005170/zq2217Isup4.cml
CCDC reference: 990423
Additional supporting information: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C7—H7A⋯O2i | 0.98 | 2.54 | 3.393 (2) | 145 |
Symmetry code: (i)
.
Acknowledgments
WHP and SL thank Joseph Urban for his assistance in interpreting the conformational nature of the methyl H atoms in this structure. SL thanks NSF CHE1110911 for sabbatical support through the ROA program. LI thanks the NSF (grant No. CHE-1110911) for financial support.
supplementary crystallographic information
1. Comment
The title compound is a monomer for free radical polymerization (Batz et al., 1972) and controlled free radical (ATRP) polymerizations (Rathfon & Tew, 2008) to form homo- and copolymers. After preliminary polymerization, these polymers serve as candidates to undergo post-polymerization modification to create functional polymers (Gauthier et al., 2009). A structure determination was undertaken to investigate the possibility of free radical, topochemical polymerization of this monomer while being exposed to X-ray radiation (Matsumoto, 2003). The molecular unit is shown in Figure 1. The crystal structure reveals that no polymerization has taken place. The asymmetric unit consists of a single monomer unit packed into a monoclinic cell with a volume of 871 Å3. While analysis of the intermolecular contacts within the unit cell reveals a close contact of 3.487 Å between the carbons of adjacent double bonds (C6 and C8), this contact occurs between a pair of adjacent molecules but is not maintained with additional molecules in order to achieve a favorable pathway for polymerization. Figure 2 shows the packing in the unit cell. The molecule is composed of two planar regions. Least-squares planar analysis reveals r.m.s. deviation from planarity for the pyrrolidine ring of 0.014 Å and 0.028 Å for the propenoate portion. The two planes are essentially normal to each other with an angle of 86.58 (4) degrees between least-squares planes. The conformation of the methyl H atoms is found to be syn to the vinylic proton. This is the preferred configuration by approximately 2 kcal/mol (Deslongchamps & Deslongchamps, 2011).
2. Experimental
Crystals of the title compound, C8H9NO4, were grown unintentionally from slow evaporation of a solution of the compound in 1:4 ethyl acetate:hexanes at 0 °C.
3. Refinement
Although all of the H-atoms were located in difference maps, H-atoms were placed at idealized positions and refined with a riding model having Uiso(H) = 1.2 times Ueq(C).
Figures
Fig. 1.
The molecular structure of the title compound, with atom labels and 50% probability displacement ellipsoids for non-H atoms
Fig. 2.
Unit cell view along the +a axis showing the lack of proper stacking for polymerization to occur.
Crystal data
| C8H9NO4 | F(000) = 384 |
| Mr = 183.16 | Dx = 1.397 Mg m−3Dm = 1.337 (2) Mg m−3Dm measured by flotation |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| a = 9.6137 (8) Å | Cell parameters from 8309 reflections |
| b = 10.9317 (9) Å | θ = 2.2–25.3° |
| c = 8.4911 (7) Å | µ = 0.11 mm−1 |
| β = 102.522 (2)° | T = 173 K |
| V = 871.14 (12) Å3 | Parallelpiped, colourless |
| Z = 4 | 0.24 × 0.14 × 0.07 mm |
Data collection
| Bruker Kappa APEXII DUO diffractometer | 1595 independent reflections |
| Radiation source: a micro-focus source with X-ray optics for beam focussing and collimation | 1353 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.042 |
| Detector resolution: 512 pixels mm-1 | θmax = 25.3°, θmin = 2.2° |
| combination of ω and phi scans | h = −11→11 |
| Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | k = −13→13 |
| Tmin = 0.884, Tmax = 1.000 | l = −10→10 |
| 20817 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.085 | H-atom parameters constrained |
| S = 1.06 | w = 1/[σ2(Fo2) + (0.0278P)2 + 0.472P] where P = (Fo2 + 2Fc2)/3 |
| 1595 reflections | (Δ/σ)max < 0.001 |
| 119 parameters | Δρmax = 0.19 e Å−3 |
| 0 restraints | Δρmin = −0.17 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.CheckCIF detected one Alert level C stating that a large K value of 2.279 was detected in the Analysis of Variance. Examination of the SHELX output does reveal one large K value (1.967) for the Fc/Fc(max of 0.000). Examination of the K values as a function of resolution shows no large K values from inf to 0.83 Å. Our conclusion is that the large K value results from very weak relections in the 0.80 - 0.60 A region and should have a neglibile effect upon the final structural results while the inclusion of the data would minimize termination effects in the calculation of electron density. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.82074 (17) | 0.05447 (15) | 0.09507 (19) | 0.0323 (4) | |
| H1A | 0.8376 | 0.0287 | −0.0110 | 0.039* | |
| H1B | 0.7895 | −0.0176 | 0.1490 | 0.039* | |
| C2 | 0.95609 (18) | 0.10915 (15) | 0.19895 (19) | 0.0326 (4) | |
| H2A | 0.9894 | 0.0594 | 0.2973 | 0.039* | |
| H2B | 1.0329 | 0.1126 | 0.1380 | 0.039* | |
| C3 | 0.91646 (17) | 0.23566 (15) | 0.24251 (18) | 0.0301 (4) | |
| C4 | 0.71008 (17) | 0.15357 (14) | 0.07441 (18) | 0.0283 (4) | |
| C5 | 0.72829 (16) | 0.44523 (14) | 0.06764 (17) | 0.0261 (3) | |
| C6 | 0.66346 (16) | 0.56484 (14) | 0.09024 (18) | 0.0270 (4) | |
| C7 | 0.6865 (2) | 0.66054 (16) | −0.0276 (2) | 0.0420 (4) | |
| H7A | 0.6435 | 0.7377 | −0.0037 | 0.063* | |
| H7B | 0.6422 | 0.6342 | −0.1373 | 0.063* | |
| H7C | 0.7890 | 0.6723 | −0.0188 | 0.063* | |
| C8 | 0.59118 (17) | 0.58160 (15) | 0.20439 (19) | 0.0324 (4) | |
| H8A | 0.5800 | 0.5160 | 0.2740 | 0.039* | |
| H8B | 0.5504 | 0.6592 | 0.2168 | 0.039* | |
| N1 | 0.77548 (14) | 0.25062 (11) | 0.16597 (15) | 0.0289 (3) | |
| O1 | 0.98688 (13) | 0.31280 (11) | 0.32386 (15) | 0.0441 (3) | |
| O2 | 0.58963 (13) | 0.15423 (11) | −0.00275 (15) | 0.0408 (3) | |
| O3 | 0.70452 (12) | 0.35922 (9) | 0.17939 (13) | 0.0319 (3) | |
| O4 | 0.79410 (13) | 0.42090 (11) | −0.03174 (14) | 0.0402 (3) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0440 (10) | 0.0246 (8) | 0.0283 (8) | 0.0082 (7) | 0.0076 (7) | −0.0019 (7) |
| C2 | 0.0377 (9) | 0.0288 (9) | 0.0328 (8) | 0.0099 (7) | 0.0108 (7) | 0.0026 (7) |
| C3 | 0.0382 (9) | 0.0269 (9) | 0.0264 (8) | 0.0032 (7) | 0.0097 (7) | 0.0037 (7) |
| C4 | 0.0385 (9) | 0.0254 (8) | 0.0234 (7) | 0.0048 (7) | 0.0118 (7) | 0.0025 (6) |
| C5 | 0.0296 (8) | 0.0246 (8) | 0.0225 (7) | 0.0025 (6) | 0.0021 (6) | 0.0002 (6) |
| C6 | 0.0273 (8) | 0.0210 (8) | 0.0281 (8) | 0.0019 (6) | −0.0042 (6) | −0.0022 (6) |
| C7 | 0.0430 (10) | 0.0295 (9) | 0.0516 (11) | 0.0068 (8) | 0.0064 (8) | 0.0112 (8) |
| C8 | 0.0356 (9) | 0.0258 (8) | 0.0321 (8) | 0.0068 (7) | −0.0009 (7) | −0.0079 (7) |
| N1 | 0.0389 (8) | 0.0183 (7) | 0.0296 (7) | 0.0104 (5) | 0.0078 (6) | 0.0001 (5) |
| O1 | 0.0487 (8) | 0.0335 (7) | 0.0470 (7) | −0.0019 (6) | 0.0033 (6) | −0.0072 (6) |
| O2 | 0.0366 (7) | 0.0415 (7) | 0.0429 (7) | 0.0065 (5) | 0.0053 (6) | −0.0038 (6) |
| O3 | 0.0460 (7) | 0.0209 (6) | 0.0323 (6) | 0.0125 (5) | 0.0164 (5) | 0.0030 (5) |
| O4 | 0.0551 (8) | 0.0342 (7) | 0.0370 (7) | 0.0107 (6) | 0.0226 (6) | 0.0050 (5) |
Geometric parameters (Å, º)
| C1—C4 | 1.502 (2) | C5—O4 | 1.1894 (18) |
| C1—C2 | 1.527 (2) | C5—O3 | 1.3895 (18) |
| C1—H1A | 0.9900 | C5—C6 | 1.479 (2) |
| C1—H1B | 0.9900 | C6—C8 | 1.322 (2) |
| C2—C3 | 1.502 (2) | C6—C7 | 1.497 (2) |
| C2—H2A | 0.9900 | C7—H7A | 0.9800 |
| C2—H2B | 0.9900 | C7—H7B | 0.9800 |
| C3—O1 | 1.202 (2) | C7—H7C | 0.9800 |
| C3—N1 | 1.380 (2) | C8—H8A | 0.9500 |
| C4—O2 | 1.2005 (19) | C8—H8B | 0.9500 |
| C4—N1 | 1.383 (2) | N1—O3 | 1.3862 (15) |
| C4—C1—C2 | 106.17 (13) | O4—C5—C6 | 126.43 (14) |
| C4—C1—H1A | 110.5 | O3—C5—C6 | 111.92 (12) |
| C2—C1—H1A | 110.5 | C8—C6—C5 | 121.40 (15) |
| C4—C1—H1B | 110.5 | C8—C6—C7 | 124.80 (15) |
| C2—C1—H1B | 110.5 | C5—C6—C7 | 113.80 (14) |
| H1A—C1—H1B | 108.7 | C6—C7—H7A | 109.5 |
| C3—C2—C1 | 105.84 (13) | C6—C7—H7B | 109.5 |
| C3—C2—H2A | 110.6 | H7A—C7—H7B | 109.5 |
| C1—C2—H2A | 110.6 | C6—C7—H7C | 109.5 |
| C3—C2—H2B | 110.6 | H7A—C7—H7C | 109.5 |
| C1—C2—H2B | 110.6 | H7B—C7—H7C | 109.5 |
| H2A—C2—H2B | 108.7 | C6—C8—H8A | 120.0 |
| O1—C3—N1 | 124.12 (15) | C6—C8—H8B | 120.0 |
| O1—C3—C2 | 130.27 (15) | H8A—C8—H8B | 120.0 |
| N1—C3—C2 | 105.60 (13) | C3—N1—C4 | 117.01 (13) |
| O2—C4—N1 | 124.70 (14) | C3—N1—O3 | 120.89 (13) |
| O2—C4—C1 | 130.03 (15) | C4—N1—O3 | 122.09 (13) |
| N1—C4—C1 | 105.28 (13) | N1—O3—C5 | 111.51 (11) |
| O4—C5—O3 | 121.65 (14) | ||
| C4—C1—C2—C3 | 3.14 (16) | O1—C3—N1—O3 | −0.2 (2) |
| C1—C2—C3—O1 | 179.04 (17) | C2—C3—N1—O3 | −179.34 (12) |
| C1—C2—C3—N1 | −1.86 (16) | O2—C4—N1—C3 | −177.73 (15) |
| C2—C1—C4—O2 | 176.76 (16) | C1—C4—N1—C3 | 2.28 (18) |
| C2—C1—C4—N1 | −3.24 (16) | O2—C4—N1—O3 | 1.3 (2) |
| O4—C5—C6—C8 | 179.43 (16) | C1—C4—N1—O3 | −178.65 (12) |
| O3—C5—C6—C8 | −0.8 (2) | C3—N1—O3—C5 | 84.50 (16) |
| O4—C5—C6—C7 | 0.1 (2) | C4—N1—O3—C5 | −94.54 (16) |
| O3—C5—C6—C7 | 179.94 (13) | O4—C5—O3—N1 | 4.8 (2) |
| O1—C3—N1—C4 | 178.91 (15) | C6—C5—O3—N1 | −175.03 (11) |
| C2—C3—N1—C4 | −0.25 (18) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C7—H7A···O2i | 0.98 | 2.54 | 3.393 (2) | 145 |
Symmetry code: (i) −x+1, −y+1, −z.
Footnotes
Supporting information for this paper is available from the IUCr electronic archives (Reference: ZQ2217).
References
- Batz, H., Franzmann, G. & Ringsdorf, H. (1972). Angew. Chem. Int. Ed. Engl. 11, 1103–1104. [DOI] [PubMed]
- Bruker (2013). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Deslongchamps, G. & Deslongchamps, P. (2011). Org. Biomol. Chem. 9, 5321–5333. [DOI] [PubMed]
- Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
- Gauthier, M. A., Gibson, M. I. & Klok, H. A. (2009). Angew. Chem. Int. Ed. 48, 48–58. [DOI] [PubMed]
- Matsumoto, A. (2003). Polym. J. 35(2), 93–121.
- Rathfon, J. M. & Tew, G. N. (2008). Polymer, 49, 1761–1769.
- Sheldrick, G. M. (2004). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814005170/zq2217sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814005170/zq2217Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814005170/zq2217Isup3.cdx
Supporting information file. DOI: 10.1107/S1600536814005170/zq2217Isup4.cml
CCDC reference: 990423
Additional supporting information: crystallographic information; 3D view; checkCIF report


