Abstract
The indazole ring system of the title compound, C19H21N3O3S, is almost planar (r.m.s. deviation = 0.0192 Å) and forms dihedral angles of 77.99 (15) and 83.9 (3)° with the benzene ring and allyl group, respectively. In the crystal, centrosymmetrically related molecules are connected by pairs of N—H⋯O hydrogen bonds into dimers, which are further linked by C—H⋯O hydrogen bonds, forming columns parallel to the b axis.
Related literature
For the biological activity of sulfonamides, see: Drews (2000 ▶); Supuran & Scozzafava (2001 ▶); Abbate et al. (2004 ▶); Rostom (2006 ▶); Ghorab et al. (2009 ▶). For similar compounds, see: Bouissane et al. (2006 ▶); Abbassi et al. (2012 ▶, 2013 ▶).
Experimental
Crystal data
C19H21N3O3S
M r = 371.45
Monoclinic,
a = 26.0808 (5) Å
b = 7.9335 (2) Å
c = 21.1573 (4) Å
β = 122.839 (1)°
V = 3678.13 (14) Å3
Z = 8
Mo Kα radiation
μ = 0.20 mm−1
T = 296 K
0.42 × 0.35 × 0.30 mm
Data collection
Bruker X8 APEX diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.693, T max = 0.747
37135 measured reflections
4059 independent reflections
3100 reflections with I > 2σ(I)
R int = 0.048
Refinement
R[F 2 > 2σ(F 2)] = 0.046
wR(F 2) = 0.134
S = 1.07
4059 reflections
235 parameters
H-atom parameters constrained
Δρmax = 0.28 e Å−3
Δρmin = −0.36 e Å−3
Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶).
Supplementary Material
Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814009283/rz5122sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814009283/rz5122Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814009283/rz5122Isup3.cml
CCDC reference: 999285
Additional supporting information: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N3—H3N⋯O3i | 0.84 | 2.14 | 2.960 (2) | 164 |
| C17—H17⋯O2ii | 0.93 | 2.54 | 3.333 (3) | 144 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
The authors thank the Unit of Support for Technical and Scientific Research (UATRS, CNRST) for the X-ray measurements.
supplementary crystallographic information
1. Comment
Sulfonamides possess many types of biological activities and representatives of this class of pharmacological agents are widely used in clinic as antibacterial, hypoglycemic, diuretic and anti-carbonic anhydrase agents (Drews, 2000; Supuran & Scozzafava, 2001). Previously, a host of structurally novel sulfonamide derivatives have been reported to show substantial antitumor activity in vitro and/or in vivo (Abbate et al., 2004; Rostom, 2006; Ghorab et al., 2009). Recently, some N-[7(6)-indazolyl]arylsulfonamides prepared by our research group showed important antiproliferative activity against some human and murine cell lines ((Abbassi et al., 2012; Abbassi et al., 2013; Bouissane et al., 2006).
The molecule of the title compound is built up from two fused almost coplanar five- and six-membered rings (N1/N2/C4-C10), with a maximum deviation of 0.029 (3) Å for atom C9 (Fig. 1). The indazole ring system is nearly perpendicular to the planes through the allyl group (C1–C3) and benzene ring (C13–C18) as indicated by the dihedral angles between them of 83.9 (3) and 77.99 (15)°, respectively. An intramolecular C—H···O hydrogen bond (Table 1) stabilizes the molecular comformation. The cohesion of the crystal structure is ensured by N3–H3N···O3 hydrogen bonds between centrosymmetrically related molecules forming dimers, which are further connected into columns parallel to the b axis by C17–H17···O2 hydrogen bonds (Fig. 2, Table 1).
2. Experimental
A mixture of 2-allyl-5-nitroindazole (1.22 mmol) and anhydrous SnCl2 (1.1 g, 6.1 mmol) in 25 ml of absolute ethanol was heated at 60°C for 6 h. After reduction, the starting material disappeared, and the solution was allowed to cool down. The pH was made slightly basic (pH 7–8) by addition of 5% aqueous potassium bicarbonate before extraction with ethyl acetate. The organic phase was washed with brine and dried over magnesium sulfate. The solvent was removed to afford the amine, which was immediately dissolved in pyridine (5 ml) and then reacted with 4-methylbenzenesulfonyl chloride (1.25 mmol) at room temperature for 24 h. The reaction mixture was then concentrated in vacuo and the resulting residue was purified by flash chromatography (eluted with ethyl acetate:hexane 2:8 v/v). The title compound was recrystallized from ethanol (yield = 78%, m. p. = 388 K).
3. Refinement
H atoms were located in a difference Fourier map and treated as riding with C–H = 0.93-0.97 Å, N–H = 0.84 Å, and with Uiso(H) = 1.2 Ueq (C, N) or 1.5 Ueq for methyl H atoms. Three outliers (2 0 0, -2 0 2, 1 1 1) were omitted in the last cycles of refinement.
Figures
Fig. 1.
The molecular structure of the title compound with displacement ellipsoids drawn at the 50% probability level. H atoms are represented as small circles.
Fig. 2.
Projection of the crystal structure of the title compound along the b axis, showing molecules linked by hydrogen bonds (dashed lines).
Crystal data
| C19H21N3O3S | F(000) = 1568 |
| Mr = 371.45 | Dx = 1.342 Mg m−3 |
| Monoclinic, C2/c | Melting point: 388 K |
| Hall symbol: -C 2yc | Mo Kα radiation, λ = 0.71073 Å |
| a = 26.0808 (5) Å | Cell parameters from 4059 reflections |
| b = 7.9335 (2) Å | θ = 2.3–27.1° |
| c = 21.1573 (4) Å | µ = 0.20 mm−1 |
| β = 122.839 (1)° | T = 296 K |
| V = 3678.13 (14) Å3 | Block, colourless |
| Z = 8 | 0.42 × 0.35 × 0.30 mm |
Data collection
| Bruker X8 APEX diffractometer | 4059 independent reflections |
| Radiation source: fine-focus sealed tube | 3100 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.048 |
| φ and ω scans | θmax = 27.1°, θmin = 2.3° |
| Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −33→33 |
| Tmin = 0.693, Tmax = 0.747 | k = −10→10 |
| 37135 measured reflections | l = −27→27 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.134 | H-atom parameters constrained |
| S = 1.07 | w = 1/[σ2(Fo2) + (0.0616P)2 + 3.2227P] where P = (Fo2 + 2Fc2)/3 |
| 4059 reflections | (Δ/σ)max < 0.001 |
| 235 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.36 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.18654 (15) | 1.1635 (5) | 0.01834 (19) | 0.0893 (10) | |
| H1A | 0.1582 | 1.1968 | 0.0297 | 0.107* | |
| H1B | 0.2038 | 1.2431 | 0.0030 | 0.107* | |
| C2 | 0.20182 (12) | 1.0079 (4) | 0.02385 (15) | 0.0683 (8) | |
| H2 | 0.2302 | 0.9786 | 0.0121 | 0.082* | |
| C3 | 0.17730 (12) | 0.8734 (4) | 0.04754 (16) | 0.0724 (8) | |
| H3A | 0.1511 | 0.8016 | 0.0047 | 0.087* | |
| H3B | 0.1524 | 0.9234 | 0.0638 | 0.087* | |
| C4 | 0.26062 (10) | 0.8146 (3) | 0.18156 (14) | 0.0550 (6) | |
| H4 | 0.2592 | 0.9161 | 0.2025 | 0.066* | |
| C5 | 0.30029 (9) | 0.6795 (3) | 0.21932 (12) | 0.0414 (5) | |
| C6 | 0.28267 (10) | 0.5576 (3) | 0.16164 (13) | 0.0483 (5) | |
| C7 | 0.31134 (11) | 0.3998 (3) | 0.17722 (15) | 0.0596 (7) | |
| H7 | 0.2990 | 0.3198 | 0.1395 | 0.071* | |
| C8 | 0.35751 (10) | 0.3678 (3) | 0.24888 (13) | 0.0496 (6) | |
| H9 | 0.3762 | 0.2625 | 0.2606 | 0.060* | |
| C9 | 0.37814 (9) | 0.4902 (2) | 0.30660 (11) | 0.0356 (4) | |
| C10 | 0.35000 (9) | 0.6438 (3) | 0.29332 (11) | 0.0363 (4) | |
| C11 | 0.36304 (15) | 0.9237 (3) | 0.34341 (16) | 0.0712 (8) | |
| H11B | 0.3205 | 0.9536 | 0.3207 | 0.085* | |
| H11A | 0.3758 | 0.9615 | 0.3104 | 0.085* | |
| C12 | 0.40124 (14) | 1.0063 (4) | 0.41880 (16) | 0.0715 (8) | |
| H12B | 0.3969 | 1.1264 | 0.4130 | 0.107* | |
| H12A | 0.4433 | 0.9761 | 0.4409 | 0.107* | |
| H12C | 0.3880 | 0.9692 | 0.4509 | 0.107* | |
| C13 | 0.52408 (8) | 0.5771 (2) | 0.37746 (10) | 0.0329 (4) | |
| C14 | 0.55443 (10) | 0.5564 (3) | 0.34089 (12) | 0.0428 (5) | |
| H14 | 0.5586 | 0.4500 | 0.3258 | 0.051* | |
| C15 | 0.57834 (11) | 0.6960 (3) | 0.32728 (13) | 0.0494 (6) | |
| H15 | 0.5995 | 0.6821 | 0.3036 | 0.059* | |
| C16 | 0.57191 (10) | 0.8555 (3) | 0.34757 (13) | 0.0460 (5) | |
| C17 | 0.54115 (11) | 0.8730 (3) | 0.38424 (13) | 0.0477 (5) | |
| H17 | 0.5363 | 0.9797 | 0.3984 | 0.057* | |
| C18 | 0.51797 (10) | 0.7357 (3) | 0.39973 (12) | 0.0421 (5) | |
| H18 | 0.4982 | 0.7490 | 0.4251 | 0.050* | |
| C19 | 0.59695 (14) | 1.0079 (4) | 0.33072 (18) | 0.0743 (8) | |
| H19A | 0.6303 | 0.9746 | 0.3264 | 0.111* | |
| H19B | 0.6110 | 1.0884 | 0.3707 | 0.111* | |
| H19C | 0.5654 | 1.0579 | 0.2843 | 0.111* | |
| N1 | 0.22511 (9) | 0.7686 (3) | 0.10913 (12) | 0.0592 (6) | |
| N2 | 0.23653 (9) | 0.6139 (3) | 0.09414 (12) | 0.0616 (6) | |
| N3 | 0.42783 (7) | 0.4479 (2) | 0.38105 (9) | 0.0368 (4) | |
| H3N | 0.4322 | 0.5087 | 0.4163 | 0.044* | |
| O1 | 0.37042 (8) | 0.7467 (2) | 0.35341 (9) | 0.0589 (5) | |
| O2 | 0.48852 (7) | 0.26717 (19) | 0.34847 (9) | 0.0493 (4) | |
| O3 | 0.53203 (7) | 0.3684 (2) | 0.47767 (8) | 0.0486 (4) | |
| S1 | 0.49532 (2) | 0.39937 (6) | 0.39815 (3) | 0.03587 (16) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0645 (19) | 0.080 (2) | 0.091 (2) | −0.0064 (17) | 0.0212 (18) | 0.005 (2) |
| C2 | 0.0484 (14) | 0.096 (2) | 0.0516 (15) | 0.0093 (15) | 0.0215 (12) | 0.0095 (16) |
| C3 | 0.0416 (13) | 0.081 (2) | 0.0604 (17) | 0.0034 (13) | 0.0054 (13) | 0.0161 (15) |
| C4 | 0.0419 (12) | 0.0544 (15) | 0.0548 (15) | 0.0074 (11) | 0.0172 (11) | 0.0020 (12) |
| C5 | 0.0333 (10) | 0.0438 (12) | 0.0446 (12) | 0.0008 (9) | 0.0195 (9) | 0.0008 (10) |
| C6 | 0.0347 (10) | 0.0561 (14) | 0.0435 (12) | −0.0049 (10) | 0.0144 (10) | −0.0076 (11) |
| C7 | 0.0518 (14) | 0.0542 (15) | 0.0531 (15) | −0.0049 (11) | 0.0156 (12) | −0.0207 (12) |
| C8 | 0.0480 (12) | 0.0370 (12) | 0.0566 (14) | −0.0018 (9) | 0.0236 (12) | −0.0097 (10) |
| C9 | 0.0352 (10) | 0.0320 (10) | 0.0392 (11) | −0.0016 (8) | 0.0200 (9) | 0.0006 (9) |
| C10 | 0.0370 (10) | 0.0355 (11) | 0.0380 (11) | −0.0032 (8) | 0.0213 (9) | −0.0040 (9) |
| C11 | 0.094 (2) | 0.0451 (16) | 0.0664 (18) | 0.0085 (14) | 0.0381 (17) | −0.0006 (13) |
| C12 | 0.085 (2) | 0.0484 (16) | 0.080 (2) | −0.0012 (14) | 0.0440 (17) | −0.0163 (14) |
| C13 | 0.0330 (9) | 0.0321 (10) | 0.0300 (9) | 0.0052 (8) | 0.0147 (8) | 0.0033 (8) |
| C14 | 0.0478 (12) | 0.0407 (12) | 0.0449 (12) | 0.0063 (9) | 0.0284 (10) | −0.0007 (10) |
| C15 | 0.0514 (13) | 0.0562 (15) | 0.0532 (13) | 0.0016 (11) | 0.0365 (12) | 0.0031 (11) |
| C16 | 0.0424 (11) | 0.0458 (13) | 0.0473 (13) | −0.0005 (10) | 0.0227 (10) | 0.0087 (10) |
| C17 | 0.0558 (13) | 0.0327 (12) | 0.0596 (14) | 0.0042 (10) | 0.0346 (12) | 0.0016 (10) |
| C18 | 0.0509 (12) | 0.0338 (11) | 0.0524 (13) | 0.0047 (9) | 0.0352 (11) | 0.0014 (10) |
| C19 | 0.0806 (19) | 0.0632 (19) | 0.095 (2) | −0.0091 (15) | 0.0580 (18) | 0.0138 (16) |
| N1 | 0.0365 (10) | 0.0692 (15) | 0.0498 (12) | 0.0019 (9) | 0.0089 (9) | 0.0063 (11) |
| N2 | 0.0434 (11) | 0.0702 (15) | 0.0492 (12) | −0.0022 (10) | 0.0109 (10) | −0.0057 (11) |
| N3 | 0.0419 (9) | 0.0324 (9) | 0.0389 (9) | 0.0019 (7) | 0.0238 (8) | 0.0019 (7) |
| O1 | 0.0722 (11) | 0.0430 (9) | 0.0508 (10) | 0.0097 (8) | 0.0264 (9) | −0.0026 (8) |
| O2 | 0.0595 (10) | 0.0317 (8) | 0.0595 (10) | 0.0054 (7) | 0.0341 (8) | −0.0047 (7) |
| O3 | 0.0523 (9) | 0.0491 (9) | 0.0398 (8) | 0.0167 (7) | 0.0221 (7) | 0.0171 (7) |
| S1 | 0.0418 (3) | 0.0277 (3) | 0.0375 (3) | 0.0078 (2) | 0.0211 (2) | 0.0056 (2) |
Geometric parameters (Å, º)
| C1—C2 | 1.284 (4) | C11—H11A | 0.9700 |
| C1—H1A | 0.9300 | C12—H12B | 0.9600 |
| C1—H1B | 0.9300 | C12—H12A | 0.9600 |
| C2—C3 | 1.465 (4) | C12—H12C | 0.9600 |
| C2—H2 | 0.9300 | C13—C18 | 1.382 (3) |
| C3—N1 | 1.477 (3) | C13—C14 | 1.384 (3) |
| C3—H3A | 0.9700 | C13—S1 | 1.760 (2) |
| C3—H3B | 0.9700 | C14—C15 | 1.376 (3) |
| C4—N1 | 1.342 (3) | C14—H14 | 0.9300 |
| C4—C5 | 1.400 (3) | C15—C16 | 1.375 (3) |
| C4—H4 | 0.9300 | C15—H15 | 0.9300 |
| C5—C10 | 1.418 (3) | C16—C17 | 1.393 (3) |
| C5—C6 | 1.424 (3) | C16—C19 | 1.506 (3) |
| C6—N2 | 1.350 (3) | C17—C18 | 1.369 (3) |
| C6—C7 | 1.402 (3) | C17—H17 | 0.9300 |
| C7—C8 | 1.354 (3) | C18—H18 | 0.9300 |
| C7—H7 | 0.9300 | C19—H19A | 0.9600 |
| C8—C9 | 1.418 (3) | C19—H19B | 0.9600 |
| C8—H9 | 0.9300 | C19—H19C | 0.9600 |
| C9—C10 | 1.370 (3) | N1—N2 | 1.341 (3) |
| C9—N3 | 1.435 (3) | N3—S1 | 1.6389 (16) |
| C10—O1 | 1.354 (3) | N3—H3N | 0.8417 |
| C11—O1 | 1.418 (3) | O2—S1 | 1.4261 (15) |
| C11—C12 | 1.497 (4) | O3—S1 | 1.4357 (15) |
| C11—H11B | 0.9700 | ||
| C2—C1—H1A | 120.0 | C11—C12—H12C | 109.5 |
| C2—C1—H1B | 120.0 | H12B—C12—H12C | 109.5 |
| H1A—C1—H1B | 120.0 | H12A—C12—H12C | 109.5 |
| C1—C2—C3 | 124.1 (3) | C18—C13—C14 | 120.33 (19) |
| C1—C2—H2 | 118.0 | C18—C13—S1 | 120.05 (15) |
| C3—C2—H2 | 118.0 | C14—C13—S1 | 119.59 (16) |
| C2—C3—N1 | 113.3 (2) | C15—C14—C13 | 118.9 (2) |
| C2—C3—H3A | 108.9 | C15—C14—H14 | 120.6 |
| N1—C3—H3A | 108.9 | C13—C14—H14 | 120.6 |
| C2—C3—H3B | 108.9 | C16—C15—C14 | 122.0 (2) |
| N1—C3—H3B | 108.9 | C16—C15—H15 | 119.0 |
| H3A—C3—H3B | 107.7 | C14—C15—H15 | 119.0 |
| N1—C4—C5 | 106.4 (2) | C15—C16—C17 | 118.1 (2) |
| N1—C4—H4 | 126.8 | C15—C16—C19 | 121.5 (2) |
| C5—C4—H4 | 126.8 | C17—C16—C19 | 120.4 (2) |
| C4—C5—C10 | 137.2 (2) | C18—C17—C16 | 121.1 (2) |
| C4—C5—C6 | 103.6 (2) | C18—C17—H17 | 119.5 |
| C10—C5—C6 | 119.2 (2) | C16—C17—H17 | 119.5 |
| N2—C6—C7 | 126.8 (2) | C17—C18—C13 | 119.67 (19) |
| N2—C6—C5 | 111.7 (2) | C17—C18—H18 | 120.2 |
| C7—C6—C5 | 121.4 (2) | C13—C18—H18 | 120.2 |
| C8—C7—C6 | 117.9 (2) | C16—C19—H19A | 109.5 |
| C8—C7—H7 | 121.0 | C16—C19—H19B | 109.5 |
| C6—C7—H7 | 121.0 | H19A—C19—H19B | 109.5 |
| C7—C8—C9 | 121.8 (2) | C16—C19—H19C | 109.5 |
| C7—C8—H9 | 119.1 | H19A—C19—H19C | 109.5 |
| C9—C8—H9 | 119.1 | H19B—C19—H19C | 109.5 |
| C10—C9—C8 | 121.43 (19) | N2—N1—C4 | 114.5 (2) |
| C10—C9—N3 | 119.84 (17) | N2—N1—C3 | 119.7 (2) |
| C8—C9—N3 | 118.68 (18) | C4—N1—C3 | 125.8 (2) |
| O1—C10—C9 | 116.71 (18) | N1—N2—C6 | 103.7 (2) |
| O1—C10—C5 | 125.09 (19) | C9—N3—S1 | 121.32 (13) |
| C9—C10—C5 | 118.13 (18) | C9—N3—H3N | 116.5 |
| O1—C11—C12 | 108.4 (2) | S1—N3—H3N | 108.9 |
| O1—C11—H11B | 110.0 | C10—O1—C11 | 120.3 (2) |
| C12—C11—H11B | 110.0 | O2—S1—O3 | 118.36 (10) |
| O1—C11—H11A | 110.0 | O2—S1—N3 | 108.69 (9) |
| C12—C11—H11A | 110.0 | O3—S1—N3 | 104.65 (9) |
| H11B—C11—H11A | 108.4 | O2—S1—C13 | 107.78 (9) |
| C11—C12—H12B | 109.5 | O3—S1—C13 | 108.99 (10) |
| C11—C12—H12A | 109.5 | N3—S1—C13 | 107.96 (9) |
| H12B—C12—H12A | 109.5 |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C8—H9···O2 | 0.93 | 2.48 | 2.991 (3) | 115 |
| N3—H3N···O3i | 0.84 | 2.14 | 2.960 (2) | 164 |
| C17—H17···O2ii | 0.93 | 2.54 | 3.333 (3) | 144 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, y+1, z.
Footnotes
Supporting information for this paper is available from the IUCr electronic archives (Reference: RZ5122).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814009283/rz5122sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814009283/rz5122Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814009283/rz5122Isup3.cml
CCDC reference: 999285
Additional supporting information: crystallographic information; 3D view; checkCIF report


