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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2014 Apr 30;70(Pt 5):o624. doi: 10.1107/S1600536814009283

N-(2-Allyl-4-eth­oxy-2H-indazol-5-yl)-4-methyl­benzene­sulfonamide

Hakima Chicha a, El Mostapha Rakib a, Latifa Bouissane a,*, Maurizio Viale b, Mohamed Saadi c, Lahcen El Ammari c
PMCID: PMC4011273  PMID: 24860413

Abstract

The indazole ring system of the title compound, C19H21N3O3S, is almost planar (r.m.s. deviation = 0.0192 Å) and forms dihedral angles of 77.99 (15) and 83.9 (3)° with the benzene ring and allyl group, respectively. In the crystal, centrosymmetrically related mol­ecules are connected by pairs of N—H⋯O hydrogen bonds into dimers, which are further linked by C—H⋯O hydrogen bonds, forming columns parallel to the b axis.

Related literature  

For the biological activity of sulfonamides, see: Drews (2000); Supuran & Scozzafava (2001); Abbate et al. (2004); Rostom (2006); Ghorab et al. (2009). For similar compounds, see: Bouissane et al. (2006); Abbassi et al. (2012, 2013).graphic file with name e-70-0o624-scheme1.jpg

Experimental  

Crystal data  

  • C19H21N3O3S

  • M r = 371.45

  • Monoclinic, Inline graphic

  • a = 26.0808 (5) Å

  • b = 7.9335 (2) Å

  • c = 21.1573 (4) Å

  • β = 122.839 (1)°

  • V = 3678.13 (14) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.20 mm−1

  • T = 296 K

  • 0.42 × 0.35 × 0.30 mm

Data collection  

  • Bruker X8 APEX diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.693, T max = 0.747

  • 37135 measured reflections

  • 4059 independent reflections

  • 3100 reflections with I > 2σ(I)

  • R int = 0.048

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.046

  • wR(F 2) = 0.134

  • S = 1.07

  • 4059 reflections

  • 235 parameters

  • H-atom parameters constrained

  • Δρmax = 0.28 e Å−3

  • Δρmin = −0.36 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: PLATON (Spek, 2009) and publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814009283/rz5122sup1.cif

e-70-0o624-sup1.cif (25.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814009283/rz5122Isup2.hkl

e-70-0o624-Isup2.hkl (199.1KB, hkl)

Supporting information file. DOI: 10.1107/S1600536814009283/rz5122Isup3.cml

CCDC reference: 999285

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N3—H3N⋯O3i 0.84 2.14 2.960 (2) 164
C17—H17⋯O2ii 0.93 2.54 3.333 (3) 144

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors thank the Unit of Support for Technical and Scientific Research (UATRS, CNRST) for the X-ray measurements.

supplementary crystallographic information

1. Comment

Sulfonamides possess many types of biological activities and representatives of this class of pharmacological agents are widely used in clinic as antibacterial, hypoglycemic, diuretic and anti-carbonic anhydrase agents (Drews, 2000; Supuran & Scozzafava, 2001). Previously, a host of structurally novel sulfonamide derivatives have been reported to show substantial antitumor activity in vitro and/or in vivo (Abbate et al., 2004; Rostom, 2006; Ghorab et al., 2009). Recently, some N-[7(6)-indazolyl]arylsulfonamides prepared by our research group showed important antiproliferative activity against some human and murine cell lines ((Abbassi et al., 2012; Abbassi et al., 2013; Bouissane et al., 2006).

The molecule of the title compound is built up from two fused almost coplanar five- and six-membered rings (N1/N2/C4-C10), with a maximum deviation of 0.029 (3) Å for atom C9 (Fig. 1). The indazole ring system is nearly perpendicular to the planes through the allyl group (C1–C3) and benzene ring (C13–C18) as indicated by the dihedral angles between them of 83.9 (3) and 77.99 (15)°, respectively. An intramolecular C—H···O hydrogen bond (Table 1) stabilizes the molecular comformation. The cohesion of the crystal structure is ensured by N3–H3N···O3 hydrogen bonds between centrosymmetrically related molecules forming dimers, which are further connected into columns parallel to the b axis by C17–H17···O2 hydrogen bonds (Fig. 2, Table 1).

2. Experimental

A mixture of 2-allyl-5-nitroindazole (1.22 mmol) and anhydrous SnCl2 (1.1 g, 6.1 mmol) in 25 ml of absolute ethanol was heated at 60°C for 6 h. After reduction, the starting material disappeared, and the solution was allowed to cool down. The pH was made slightly basic (pH 7–8) by addition of 5% aqueous potassium bicarbonate before extraction with ethyl acetate. The organic phase was washed with brine and dried over magnesium sulfate. The solvent was removed to afford the amine, which was immediately dissolved in pyridine (5 ml) and then reacted with 4-methylbenzenesulfonyl chloride (1.25 mmol) at room temperature for 24 h. The reaction mixture was then concentrated in vacuo and the resulting residue was purified by flash chromatography (eluted with ethyl acetate:hexane 2:8 v/v). The title compound was recrystallized from ethanol (yield = 78%, m. p. = 388 K).

3. Refinement

H atoms were located in a difference Fourier map and treated as riding with C–H = 0.93-0.97 Å, N–H = 0.84 Å, and with Uiso(H) = 1.2 Ueq (C, N) or 1.5 Ueq for methyl H atoms. Three outliers (2 0 0, -2 0 2, 1 1 1) were omitted in the last cycles of refinement.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with displacement ellipsoids drawn at the 50% probability level. H atoms are represented as small circles.

Fig. 2.

Fig. 2.

Projection of the crystal structure of the title compound along the b axis, showing molecules linked by hydrogen bonds (dashed lines).

Crystal data

C19H21N3O3S F(000) = 1568
Mr = 371.45 Dx = 1.342 Mg m3
Monoclinic, C2/c Melting point: 388 K
Hall symbol: -C 2yc Mo Kα radiation, λ = 0.71073 Å
a = 26.0808 (5) Å Cell parameters from 4059 reflections
b = 7.9335 (2) Å θ = 2.3–27.1°
c = 21.1573 (4) Å µ = 0.20 mm1
β = 122.839 (1)° T = 296 K
V = 3678.13 (14) Å3 Block, colourless
Z = 8 0.42 × 0.35 × 0.30 mm

Data collection

Bruker X8 APEX diffractometer 4059 independent reflections
Radiation source: fine-focus sealed tube 3100 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.048
φ and ω scans θmax = 27.1°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2009) h = −33→33
Tmin = 0.693, Tmax = 0.747 k = −10→10
37135 measured reflections l = −27→27

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.134 H-atom parameters constrained
S = 1.07 w = 1/[σ2(Fo2) + (0.0616P)2 + 3.2227P] where P = (Fo2 + 2Fc2)/3
4059 reflections (Δ/σ)max < 0.001
235 parameters Δρmax = 0.28 e Å3
0 restraints Δρmin = −0.36 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.18654 (15) 1.1635 (5) 0.01834 (19) 0.0893 (10)
H1A 0.1582 1.1968 0.0297 0.107*
H1B 0.2038 1.2431 0.0030 0.107*
C2 0.20182 (12) 1.0079 (4) 0.02385 (15) 0.0683 (8)
H2 0.2302 0.9786 0.0121 0.082*
C3 0.17730 (12) 0.8734 (4) 0.04754 (16) 0.0724 (8)
H3A 0.1511 0.8016 0.0047 0.087*
H3B 0.1524 0.9234 0.0638 0.087*
C4 0.26062 (10) 0.8146 (3) 0.18156 (14) 0.0550 (6)
H4 0.2592 0.9161 0.2025 0.066*
C5 0.30029 (9) 0.6795 (3) 0.21932 (12) 0.0414 (5)
C6 0.28267 (10) 0.5576 (3) 0.16164 (13) 0.0483 (5)
C7 0.31134 (11) 0.3998 (3) 0.17722 (15) 0.0596 (7)
H7 0.2990 0.3198 0.1395 0.071*
C8 0.35751 (10) 0.3678 (3) 0.24888 (13) 0.0496 (6)
H9 0.3762 0.2625 0.2606 0.060*
C9 0.37814 (9) 0.4902 (2) 0.30660 (11) 0.0356 (4)
C10 0.35000 (9) 0.6438 (3) 0.29332 (11) 0.0363 (4)
C11 0.36304 (15) 0.9237 (3) 0.34341 (16) 0.0712 (8)
H11B 0.3205 0.9536 0.3207 0.085*
H11A 0.3758 0.9615 0.3104 0.085*
C12 0.40124 (14) 1.0063 (4) 0.41880 (16) 0.0715 (8)
H12B 0.3969 1.1264 0.4130 0.107*
H12A 0.4433 0.9761 0.4409 0.107*
H12C 0.3880 0.9692 0.4509 0.107*
C13 0.52408 (8) 0.5771 (2) 0.37746 (10) 0.0329 (4)
C14 0.55443 (10) 0.5564 (3) 0.34089 (12) 0.0428 (5)
H14 0.5586 0.4500 0.3258 0.051*
C15 0.57834 (11) 0.6960 (3) 0.32728 (13) 0.0494 (6)
H15 0.5995 0.6821 0.3036 0.059*
C16 0.57191 (10) 0.8555 (3) 0.34757 (13) 0.0460 (5)
C17 0.54115 (11) 0.8730 (3) 0.38424 (13) 0.0477 (5)
H17 0.5363 0.9797 0.3984 0.057*
C18 0.51797 (10) 0.7357 (3) 0.39973 (12) 0.0421 (5)
H18 0.4982 0.7490 0.4251 0.050*
C19 0.59695 (14) 1.0079 (4) 0.33072 (18) 0.0743 (8)
H19A 0.6303 0.9746 0.3264 0.111*
H19B 0.6110 1.0884 0.3707 0.111*
H19C 0.5654 1.0579 0.2843 0.111*
N1 0.22511 (9) 0.7686 (3) 0.10913 (12) 0.0592 (6)
N2 0.23653 (9) 0.6139 (3) 0.09414 (12) 0.0616 (6)
N3 0.42783 (7) 0.4479 (2) 0.38105 (9) 0.0368 (4)
H3N 0.4322 0.5087 0.4163 0.044*
O1 0.37042 (8) 0.7467 (2) 0.35341 (9) 0.0589 (5)
O2 0.48852 (7) 0.26717 (19) 0.34847 (9) 0.0493 (4)
O3 0.53203 (7) 0.3684 (2) 0.47767 (8) 0.0486 (4)
S1 0.49532 (2) 0.39937 (6) 0.39815 (3) 0.03587 (16)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0645 (19) 0.080 (2) 0.091 (2) −0.0064 (17) 0.0212 (18) 0.005 (2)
C2 0.0484 (14) 0.096 (2) 0.0516 (15) 0.0093 (15) 0.0215 (12) 0.0095 (16)
C3 0.0416 (13) 0.081 (2) 0.0604 (17) 0.0034 (13) 0.0054 (13) 0.0161 (15)
C4 0.0419 (12) 0.0544 (15) 0.0548 (15) 0.0074 (11) 0.0172 (11) 0.0020 (12)
C5 0.0333 (10) 0.0438 (12) 0.0446 (12) 0.0008 (9) 0.0195 (9) 0.0008 (10)
C6 0.0347 (10) 0.0561 (14) 0.0435 (12) −0.0049 (10) 0.0144 (10) −0.0076 (11)
C7 0.0518 (14) 0.0542 (15) 0.0531 (15) −0.0049 (11) 0.0156 (12) −0.0207 (12)
C8 0.0480 (12) 0.0370 (12) 0.0566 (14) −0.0018 (9) 0.0236 (12) −0.0097 (10)
C9 0.0352 (10) 0.0320 (10) 0.0392 (11) −0.0016 (8) 0.0200 (9) 0.0006 (9)
C10 0.0370 (10) 0.0355 (11) 0.0380 (11) −0.0032 (8) 0.0213 (9) −0.0040 (9)
C11 0.094 (2) 0.0451 (16) 0.0664 (18) 0.0085 (14) 0.0381 (17) −0.0006 (13)
C12 0.085 (2) 0.0484 (16) 0.080 (2) −0.0012 (14) 0.0440 (17) −0.0163 (14)
C13 0.0330 (9) 0.0321 (10) 0.0300 (9) 0.0052 (8) 0.0147 (8) 0.0033 (8)
C14 0.0478 (12) 0.0407 (12) 0.0449 (12) 0.0063 (9) 0.0284 (10) −0.0007 (10)
C15 0.0514 (13) 0.0562 (15) 0.0532 (13) 0.0016 (11) 0.0365 (12) 0.0031 (11)
C16 0.0424 (11) 0.0458 (13) 0.0473 (13) −0.0005 (10) 0.0227 (10) 0.0087 (10)
C17 0.0558 (13) 0.0327 (12) 0.0596 (14) 0.0042 (10) 0.0346 (12) 0.0016 (10)
C18 0.0509 (12) 0.0338 (11) 0.0524 (13) 0.0047 (9) 0.0352 (11) 0.0014 (10)
C19 0.0806 (19) 0.0632 (19) 0.095 (2) −0.0091 (15) 0.0580 (18) 0.0138 (16)
N1 0.0365 (10) 0.0692 (15) 0.0498 (12) 0.0019 (9) 0.0089 (9) 0.0063 (11)
N2 0.0434 (11) 0.0702 (15) 0.0492 (12) −0.0022 (10) 0.0109 (10) −0.0057 (11)
N3 0.0419 (9) 0.0324 (9) 0.0389 (9) 0.0019 (7) 0.0238 (8) 0.0019 (7)
O1 0.0722 (11) 0.0430 (9) 0.0508 (10) 0.0097 (8) 0.0264 (9) −0.0026 (8)
O2 0.0595 (10) 0.0317 (8) 0.0595 (10) 0.0054 (7) 0.0341 (8) −0.0047 (7)
O3 0.0523 (9) 0.0491 (9) 0.0398 (8) 0.0167 (7) 0.0221 (7) 0.0171 (7)
S1 0.0418 (3) 0.0277 (3) 0.0375 (3) 0.0078 (2) 0.0211 (2) 0.0056 (2)

Geometric parameters (Å, º)

C1—C2 1.284 (4) C11—H11A 0.9700
C1—H1A 0.9300 C12—H12B 0.9600
C1—H1B 0.9300 C12—H12A 0.9600
C2—C3 1.465 (4) C12—H12C 0.9600
C2—H2 0.9300 C13—C18 1.382 (3)
C3—N1 1.477 (3) C13—C14 1.384 (3)
C3—H3A 0.9700 C13—S1 1.760 (2)
C3—H3B 0.9700 C14—C15 1.376 (3)
C4—N1 1.342 (3) C14—H14 0.9300
C4—C5 1.400 (3) C15—C16 1.375 (3)
C4—H4 0.9300 C15—H15 0.9300
C5—C10 1.418 (3) C16—C17 1.393 (3)
C5—C6 1.424 (3) C16—C19 1.506 (3)
C6—N2 1.350 (3) C17—C18 1.369 (3)
C6—C7 1.402 (3) C17—H17 0.9300
C7—C8 1.354 (3) C18—H18 0.9300
C7—H7 0.9300 C19—H19A 0.9600
C8—C9 1.418 (3) C19—H19B 0.9600
C8—H9 0.9300 C19—H19C 0.9600
C9—C10 1.370 (3) N1—N2 1.341 (3)
C9—N3 1.435 (3) N3—S1 1.6389 (16)
C10—O1 1.354 (3) N3—H3N 0.8417
C11—O1 1.418 (3) O2—S1 1.4261 (15)
C11—C12 1.497 (4) O3—S1 1.4357 (15)
C11—H11B 0.9700
C2—C1—H1A 120.0 C11—C12—H12C 109.5
C2—C1—H1B 120.0 H12B—C12—H12C 109.5
H1A—C1—H1B 120.0 H12A—C12—H12C 109.5
C1—C2—C3 124.1 (3) C18—C13—C14 120.33 (19)
C1—C2—H2 118.0 C18—C13—S1 120.05 (15)
C3—C2—H2 118.0 C14—C13—S1 119.59 (16)
C2—C3—N1 113.3 (2) C15—C14—C13 118.9 (2)
C2—C3—H3A 108.9 C15—C14—H14 120.6
N1—C3—H3A 108.9 C13—C14—H14 120.6
C2—C3—H3B 108.9 C16—C15—C14 122.0 (2)
N1—C3—H3B 108.9 C16—C15—H15 119.0
H3A—C3—H3B 107.7 C14—C15—H15 119.0
N1—C4—C5 106.4 (2) C15—C16—C17 118.1 (2)
N1—C4—H4 126.8 C15—C16—C19 121.5 (2)
C5—C4—H4 126.8 C17—C16—C19 120.4 (2)
C4—C5—C10 137.2 (2) C18—C17—C16 121.1 (2)
C4—C5—C6 103.6 (2) C18—C17—H17 119.5
C10—C5—C6 119.2 (2) C16—C17—H17 119.5
N2—C6—C7 126.8 (2) C17—C18—C13 119.67 (19)
N2—C6—C5 111.7 (2) C17—C18—H18 120.2
C7—C6—C5 121.4 (2) C13—C18—H18 120.2
C8—C7—C6 117.9 (2) C16—C19—H19A 109.5
C8—C7—H7 121.0 C16—C19—H19B 109.5
C6—C7—H7 121.0 H19A—C19—H19B 109.5
C7—C8—C9 121.8 (2) C16—C19—H19C 109.5
C7—C8—H9 119.1 H19A—C19—H19C 109.5
C9—C8—H9 119.1 H19B—C19—H19C 109.5
C10—C9—C8 121.43 (19) N2—N1—C4 114.5 (2)
C10—C9—N3 119.84 (17) N2—N1—C3 119.7 (2)
C8—C9—N3 118.68 (18) C4—N1—C3 125.8 (2)
O1—C10—C9 116.71 (18) N1—N2—C6 103.7 (2)
O1—C10—C5 125.09 (19) C9—N3—S1 121.32 (13)
C9—C10—C5 118.13 (18) C9—N3—H3N 116.5
O1—C11—C12 108.4 (2) S1—N3—H3N 108.9
O1—C11—H11B 110.0 C10—O1—C11 120.3 (2)
C12—C11—H11B 110.0 O2—S1—O3 118.36 (10)
O1—C11—H11A 110.0 O2—S1—N3 108.69 (9)
C12—C11—H11A 110.0 O3—S1—N3 104.65 (9)
H11B—C11—H11A 108.4 O2—S1—C13 107.78 (9)
C11—C12—H12B 109.5 O3—S1—C13 108.99 (10)
C11—C12—H12A 109.5 N3—S1—C13 107.96 (9)
H12B—C12—H12A 109.5

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C8—H9···O2 0.93 2.48 2.991 (3) 115
N3—H3N···O3i 0.84 2.14 2.960 (2) 164
C17—H17···O2ii 0.93 2.54 3.333 (3) 144

Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, y+1, z.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: RZ5122).

References

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  2. Abbassi, N., Rakib, E. M., Hannioui, A., Saadi, M. & El Ammari, L. (2013). Acta Cryst. E69, o190–o191. [DOI] [PMC free article] [PubMed]
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  13. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814009283/rz5122sup1.cif

e-70-0o624-sup1.cif (25.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814009283/rz5122Isup2.hkl

e-70-0o624-Isup2.hkl (199.1KB, hkl)

Supporting information file. DOI: 10.1107/S1600536814009283/rz5122Isup3.cml

CCDC reference: 999285

Additional supporting information: crystallographic information; 3D view; checkCIF report


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