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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2014 Apr 9;70(Pt 5):m173. doi: 10.1107/S1600536814007077

Di­chlorido­(4-{[(quinolin-2-yl)methyl­idene]amino}phenol-κ2 N,N′)mercury(II)

Md Serajul Haque Faizi a, Pratik Sen a,*
PMCID: PMC4011313  PMID: 24860307

Abstract

In the mononuclear title complex, [HgCl2(C16H12N2O)], synthesized from the phenolic Schiff base 4-[(quinolin-2-yl­methyl­idene)amino]­phenol (QMAP), the coordination geometry around Hg2+ is distorted tetra­hedral, comprising two Cl atoms [Hg—Cl = 2.3565 (12) and 2.5219 (12) Å] and two N-atom donors from the QMAP ligand, viz. one imine and the other quinoline [Hg—N = 2.392 (2) and 2.237 (2) Å, respectively]. In the crystal, O—H⋯Cl hydrogen bonds generate a chain structure extending along the c-axis direction. Weak C—H⋯Cl and π–π stacking inter­actions [minimum ring centroid separation = 3.641 (3) Å] give an overall layered structure lying parallel to (001).

Related literature  

For applications of 4-[(quinolin-2-ylmethylene)amino]phenol and related structures, see: Das et al. (2013); Jursic et al. (2002). For a related structure, see: Marjani et al. (2009).graphic file with name e-70-0m173-scheme1.jpg

Experimental  

Crystal data  

  • [HgCl2(C16H12N2O)]

  • M r = 519.77

  • Monoclinic, Inline graphic

  • a = 7.539 (5) Å

  • b = 18.551 (5) Å

  • c = 10.806 (5) Å

  • β = 94.380 (5)°

  • V = 1506.9 (13) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 10.57 mm−1

  • T = 100 K

  • 0.29 × 0.19 × 0.12 mm

Data collection  

  • Bruker SMART APEX CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 2004) T min = 0.143, T max = 0.352

  • 11156 measured reflections

  • 2967 independent reflections

  • 2679 reflections with I > 2σ(I)

  • R int = 0.024

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.016

  • wR(F 2) = 0.035

  • S = 1.05

  • 2967 reflections

  • 200 parameters

  • 1 restraint

  • H-atom parameters constrained

  • Δρmax = 0.65 e Å−3

  • Δρmin = −0.40 e Å−3

Data collection: SMART (Bruker, 2003); cell refinement: SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenberg & Putz, 2006); software used to prepare material for publication: DIAMOND (Brandenberg & Putz, 2006).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814007077/zs2293sup1.cif

e-70-0m173-sup1.cif (18.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814007077/zs2293Isup2.hkl

e-70-0m173-Isup2.hkl (142.7KB, hkl)

CCDC reference: 994407

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O1—H1⋯Cl2i 0.82 2.39 3.204 (3) 171
C7—H7⋯Cl2ii 0.92 2.78 3.644 (4) 156

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors are grateful to the Science and Engineering Research Board, Government of India (project No. SR/S11/PC-08/2011.

supplementary crystallographic information

1. Comment

Quinoline derivatives of Schiff bases are important building blocks of many important compounds widely used in biological applications such as antioxidative and anticancer and fluorescent probe agents in industry and in coordination chemistry (Das et al., 2013; Jursic et al., 2002). The synthesis of polymeric complex of mercury(II) using the quinoline aldehyde derivative of the Schiff base 4-(quinolin-2-ylmethylene)aminophenol (QMAP) has not previously been reported. The title HgII complex with QMAP, [Hg(C16H12N2O)Cl2] has been synthesized and the structure is reported herein.

In the title mononuclear complex (Fig. 1) the HgCl2N2 coordination geometry is distorted tetrahedral, comprising two Cl-atoms [Hg1—Cl1 and Hg1—Cl2 = 2.3565 (12) and 2.5219 (12) Å respectively] and two N-atom donors from the QMAP ligand, one imine [Hg1–N1 = 2.392 (2) Å] and the other quinoline [Hg1—N2 = 2.237 (2) Å]. The observed Hg—Cl and Hg—N bond lengths and bond angles are considered normal for this type of HgII complex, e.g., [Hg—N = 2.396 (4) Å] and [Hg—Cl = 2.367 (4) Å] (Marjani et al., 2009). In the crystal, O1—H···Cl2 hydrogen bonds (Table 2) give a one-dimensional chain structure which extends along c (Fig. 2) and weak C7—H···Cl2 hydrogen bonds and π–π ring stacking interactions [minimum ring centroid separation between the inversion related benzene and quinoline rings = 3.641 (3) Å] give an overall two-dimensional layered structure lying parallel to (001) (Fig. 3).

2. Experimental

A mixture of 4-(quinolin-2-ylmethylene)aminophenol (QMAP) (0.10 g, 0.40 mmol), mercury(II) chloride (0.11 g, 0.40 mmol) and ethanol (5 ml) were stirred vigorously for 30 min, after which the precipitate was filtered off and dissolved in dimethylformamide. Crystals of the title complex suitable for X-ray analysis was obtained within 2 days by slow evaporation of the DMF solvent.

3. Refinement

All H-atoms were positioned geometrically and refined using a riding model with C—H = 0.92–0.93 Å and Uiso(H) = 1.2Ueq(C). The phenolic H-atom as located from a difference-Fourier map was also allowed to ride, with O—H = 0.83 (2) Å and, Uiso(H) = 1.5Ueq(O).

Figures

Fig. 1.

Fig. 1.

The molecular conformation and atom-numbering scheme for the title complex with non-H atoms drawn as 30% probability displacement ellipsoids.

Fig. 2.

Fig. 2.

The one-dimensional hydrogen-bonded chain structure in the title complex extending along c, with hydrogen bonds shown as dashed lines.

Fig. 3.

Fig. 3.

The two-dimensional structure viewed along the a-axial direction.

Crystal data

[HgCl2(C16H12N2O)] F(000) = 976
Mr = 519.77 Dx = 2.291 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 999 reflections
a = 7.539 (5) Å θ = 1.8–25.5°
b = 18.551 (5) Å µ = 10.57 mm1
c = 10.806 (5) Å T = 100 K
β = 94.380 (5)° Needle, yellow
V = 1506.9 (13) Å3 0.29 × 0.19 × 0.12 mm
Z = 4

Data collection

Bruker SMART APEX CCD diffractometer 2967 independent reflections
Radiation source: fine-focus sealed tube 2679 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.024
ω scans θmax = 26.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) h = −9→9
Tmin = 0.143, Tmax = 0.352 k = −22→22
11156 measured reflections l = −13→10

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.016 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.035 H-atom parameters constrained
S = 1.05 w = 1/[σ2(Fo2) + (0.0146P)2 + 0.8024P] where P = (Fo2 + 2Fc2)/3
2967 reflections (Δ/σ)max < 0.001
200 parameters Δρmax = 0.65 e Å3
1 restraint Δρmin = −0.40 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.7674 (4) 1.15360 (15) −0.3705 (3) 0.0140 (6)
C2 0.8429 (4) 1.17912 (16) −0.2579 (3) 0.0147 (6)
H2 0.8987 1.2238 −0.2535 0.018*
C3 0.8345 (4) 1.13750 (15) −0.1520 (3) 0.0143 (6)
H3 0.8842 1.1548 −0.0764 0.017*
C4 0.7528 (4) 1.07023 (15) −0.1574 (3) 0.0124 (6)
C5 0.6783 (4) 1.04481 (16) −0.2710 (3) 0.0141 (6)
H5 0.6235 0.9999 −0.2757 0.017*
C6 0.6857 (4) 1.08617 (15) −0.3766 (3) 0.0140 (6)
H6 0.6359 1.0689 −0.4522 0.017*
C7 0.6910 (4) 0.96599 (16) −0.0438 (3) 0.0124 (6)
C8 0.6931 (4) 0.92330 (15) 0.0707 (3) 0.0120 (6)
C9 0.6343 (4) 0.85181 (15) 0.0639 (3) 0.0135 (6)
H9 0.5937 0.8318 −0.0119 0.016*
C10 0.6374 (4) 0.81183 (16) 0.1701 (3) 0.0150 (6)
H10 0.5981 0.7643 0.1671 0.018*
C11 0.6999 (4) 0.84260 (15) 0.2837 (3) 0.0132 (6)
C12 0.7564 (4) 0.91591 (15) 0.2848 (3) 0.0116 (6)
C13 0.8157 (4) 0.94846 (16) 0.3981 (3) 0.0153 (6)
H13 0.8537 0.9962 0.3994 0.018*
C14 0.8176 (4) 0.91016 (16) 0.5057 (3) 0.0176 (7)
H14 0.8556 0.9323 0.5803 0.021*
C15 0.7628 (4) 0.83733 (16) 0.5061 (3) 0.0180 (7)
H15 0.7656 0.8119 0.5804 0.022*
C16 0.7061 (4) 0.80451 (16) 0.3977 (3) 0.0163 (6)
H16 0.6709 0.7565 0.3984 0.020*
N1 0.7487 (3) 1.03052 (12) −0.0449 (2) 0.0113 (5)
N2 0.7526 (3) 0.95410 (13) 0.1765 (2) 0.0117 (5)
O1 0.7768 (3) 1.19596 (11) −0.47207 (19) 0.0199 (5)
H1 0.7324 1.1748 −0.5334 0.030*
Hg1 0.832221 (15) 1.069766 (6) 0.162214 (10) 0.01536 (4)
Cl1 1.07921 (9) 1.14792 (4) 0.18122 (6) 0.01560 (15)
Cl2 0.59358 (10) 1.13188 (4) 0.27415 (7) 0.01732 (15)
H7 0.6500 0.9430 −0.1160 0.0140*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0159 (15) 0.0118 (15) 0.0148 (14) 0.0042 (12) 0.0041 (12) 0.0050 (12)
C2 0.0147 (15) 0.0108 (15) 0.0188 (16) 0.0003 (12) 0.0022 (12) 0.0008 (12)
C3 0.0151 (15) 0.0153 (15) 0.0127 (14) 0.0015 (12) 0.0023 (12) −0.0007 (12)
C4 0.0112 (14) 0.0138 (15) 0.0123 (14) 0.0043 (12) 0.0019 (11) 0.0004 (12)
C5 0.0157 (15) 0.0112 (14) 0.0154 (15) −0.0003 (12) 0.0006 (12) 0.0001 (12)
C6 0.0163 (15) 0.0153 (16) 0.0103 (14) 0.0007 (12) 0.0008 (12) −0.0011 (11)
C7 0.0122 (14) 0.0133 (15) 0.0116 (14) 0.0012 (12) 0.0011 (12) −0.0029 (12)
C8 0.0099 (13) 0.0120 (15) 0.0142 (14) 0.0011 (12) 0.0011 (11) −0.0008 (12)
C9 0.0154 (15) 0.0129 (15) 0.0122 (14) −0.0018 (12) 0.0000 (12) −0.0045 (12)
C10 0.0176 (15) 0.0090 (14) 0.0191 (15) −0.0002 (12) 0.0052 (13) −0.0016 (12)
C11 0.0132 (14) 0.0133 (15) 0.0134 (14) 0.0022 (12) 0.0034 (12) −0.0010 (12)
C12 0.0100 (13) 0.0138 (15) 0.0114 (14) 0.0019 (11) 0.0033 (11) 0.0012 (11)
C13 0.0171 (15) 0.0106 (15) 0.0180 (15) −0.0021 (12) 0.0009 (13) −0.0001 (12)
C14 0.0237 (16) 0.0167 (16) 0.0121 (15) −0.0006 (13) −0.0014 (13) −0.0023 (12)
C15 0.0221 (16) 0.0180 (16) 0.0135 (15) 0.0005 (13) −0.0003 (13) 0.0046 (12)
C16 0.0211 (16) 0.0096 (15) 0.0183 (16) −0.0006 (12) 0.0029 (13) 0.0019 (12)
N1 0.0116 (12) 0.0109 (13) 0.0114 (12) 0.0011 (10) 0.0018 (10) −0.0005 (10)
N2 0.0120 (12) 0.0088 (12) 0.0143 (12) 0.0006 (10) 0.0008 (10) 0.0005 (10)
O1 0.0322 (13) 0.0140 (11) 0.0134 (10) −0.0044 (10) 0.0012 (10) 0.0040 (9)
Hg1 0.02022 (7) 0.01239 (6) 0.01368 (6) −0.00471 (5) 0.00259 (4) −0.00206 (5)
Cl1 0.0152 (3) 0.0146 (4) 0.0169 (3) −0.0022 (3) 0.0008 (3) −0.0007 (3)
Cl2 0.0177 (4) 0.0182 (4) 0.0161 (4) 0.0002 (3) 0.0018 (3) −0.0042 (3)

Geometric parameters (Å, º)

C1—O1 1.356 (3) C10—C11 1.402 (4)
C1—C2 1.386 (4) C10—H10 0.9300
C1—C6 1.394 (4) C11—C16 1.418 (4)
C2—C3 1.386 (4) C11—C12 1.425 (4)
C2—H2 0.9300 C12—N2 1.366 (4)
C3—C4 1.391 (4) C12—C13 1.407 (4)
C3—H3 0.9300 C13—C14 1.363 (4)
C4—C5 1.393 (4) C13—H13 0.9300
C4—N1 1.424 (4) C14—C15 1.413 (4)
C5—C6 1.379 (4) C14—H14 0.9300
C5—H5 0.9300 C15—C16 1.360 (4)
C6—H6 0.9300 C15—H15 0.9300
C7—N1 1.274 (4) C16—H16 0.9300
C7—C8 1.469 (4) N1—Hg1 2.392 (2)
C7—H7 0.9170 N2—Hg1 2.237 (2)
C8—N2 1.325 (4) O1—H1 0.8200
C8—C9 1.398 (4) Hg1—Cl1 2.3565 (12)
C9—C10 1.365 (4) Hg1—Cl2 2.5219 (12)
C9—H9 0.9300
O1—C1—C2 118.0 (3) C10—C11—C12 118.4 (3)
O1—C1—C6 122.2 (3) C16—C11—C12 118.6 (3)
C2—C1—C6 119.9 (3) N2—C12—C13 120.5 (3)
C3—C2—C1 119.5 (3) N2—C12—C11 120.1 (3)
C3—C2—H2 120.2 C13—C12—C11 119.5 (3)
C1—C2—H2 120.2 C14—C13—C12 120.1 (3)
C2—C3—C4 120.9 (3) C14—C13—H13 120.0
C2—C3—H3 119.6 C12—C13—H13 120.0
C4—C3—H3 119.6 C13—C14—C15 121.1 (3)
C3—C4—C5 119.2 (3) C13—C14—H14 119.4
C3—C4—N1 117.8 (2) C15—C14—H14 119.4
C5—C4—N1 122.9 (3) C16—C15—C14 119.9 (3)
C6—C5—C4 120.1 (3) C16—C15—H15 120.1
C6—C5—H5 119.9 C14—C15—H15 120.1
C4—C5—H5 119.9 C15—C16—C11 120.8 (3)
C5—C6—C1 120.4 (3) C15—C16—H16 119.6
C5—C6—H6 119.8 C11—C16—H16 119.6
C1—C6—H6 119.8 C7—N1—C4 121.6 (2)
N1—C7—C8 122.2 (3) C7—N1—Hg1 110.07 (19)
N1—C7—H7 121.0 C4—N1—Hg1 128.32 (18)
C8—C7—H7 116.0 C8—N2—C12 119.9 (2)
N2—C8—C9 122.6 (3) C8—N2—Hg1 115.40 (19)
N2—C8—C7 118.4 (3) C12—N2—Hg1 124.64 (19)
C9—C8—C7 119.0 (3) C1—O1—H1 109.5
C10—C9—C8 119.1 (3) N2—Hg1—Cl1 143.01 (6)
C10—C9—H9 120.4 N2—Hg1—N1 73.73 (8)
C8—C9—H9 120.5 Cl1—Hg1—N1 114.76 (6)
C9—C10—C11 119.8 (3) N2—Hg1—Cl2 101.54 (7)
C9—C10—H10 120.1 Cl1—Hg1—Cl2 105.37 (4)
C11—C10—H10 120.1 N1—Hg1—Cl2 116.19 (6)
C10—C11—C16 123.0 (3)
O1—C1—C2—C3 179.5 (3) C12—C11—C16—C15 0.7 (4)
C6—C1—C2—C3 −0.7 (4) C8—C7—N1—C4 177.3 (3)
C1—C2—C3—C4 0.6 (4) C8—C7—N1—Hg1 −4.5 (3)
C2—C3—C4—C5 −0.2 (4) C3—C4—N1—C7 −173.5 (3)
C2—C3—C4—N1 −179.8 (3) C5—C4—N1—C7 6.8 (4)
C3—C4—C5—C6 −0.1 (4) C3—C4—N1—Hg1 8.6 (4)
N1—C4—C5—C6 179.5 (3) C5—C4—N1—Hg1 −171.1 (2)
C4—C5—C6—C1 −0.1 (4) C9—C8—N2—C12 −0.6 (4)
O1—C1—C6—C5 −179.7 (3) C7—C8—N2—C12 180.0 (2)
C2—C1—C6—C5 0.5 (4) C9—C8—N2—Hg1 −178.6 (2)
N1—C7—C8—N2 2.0 (4) C7—C8—N2—Hg1 2.1 (3)
N1—C7—C8—C9 −177.4 (3) C13—C12—N2—C8 −178.7 (3)
N2—C8—C9—C10 0.2 (4) C11—C12—N2—C8 1.3 (4)
C7—C8—C9—C10 179.5 (3) C13—C12—N2—Hg1 −1.0 (4)
C8—C9—C10—C11 −0.3 (4) C11—C12—N2—Hg1 178.98 (19)
C9—C10—C11—C16 179.7 (3) C8—N2—Hg1—Cl1 −112.83 (19)
C9—C10—C11—C12 0.9 (4) C12—N2—Hg1—Cl1 69.4 (2)
C10—C11—C12—N2 −1.4 (4) C8—N2—Hg1—N1 −3.10 (19)
C16—C11—C12—N2 179.8 (3) C12—N2—Hg1—N1 179.1 (2)
C10—C11—C12—C13 178.5 (3) C8—N2—Hg1—Cl2 111.08 (19)
C16—C11—C12—C13 −0.3 (4) C12—N2—Hg1—Cl2 −66.7 (2)
N2—C12—C13—C14 179.4 (3) C7—N1—Hg1—N2 3.94 (18)
C11—C12—C13—C14 −0.5 (4) C4—N1—Hg1—N2 −178.0 (2)
C12—C13—C14—C15 0.9 (5) C7—N1—Hg1—Cl1 145.35 (17)
C13—C14—C15—C16 −0.4 (5) C4—N1—Hg1—Cl1 −36.6 (2)
C14—C15—C16—C11 −0.4 (5) C7—N1—Hg1—Cl2 −91.15 (19)
C10—C11—C16—C15 −178.0 (3) C4—N1—Hg1—Cl2 87.0 (2)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O1—H1···Cl2i 0.82 2.39 3.204 (3) 171
C7—H7···Cl2ii 0.92 2.78 3.644 (4) 156

Symmetry codes: (i) x, y, z−1; (ii) −x+1, −y+2, −z.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: ZS2293).

References

  1. Altomare, A., Burla, M. C., Camalli, M., Cascarano, G. L., Giacovazzo, C., Guagliardi, A., Moliterni, A. G. G., Polidori, G. & Spagna, R. (1999). J. Appl. Cryst. 32, 115–119.
  2. Brandenberg, K. & Putz, H. (2006). DIAMOND Crystal Impact, Bonn, Germany.
  3. Bruker (2003). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Das, P., Mandal, A. K., Reddy, G. U., Baidya, M., Ghosh, S. K. & Das, A. (2013). Org. Biomol. Chem. 11, 6604–6614. [DOI] [PubMed]
  5. Jursic, B. S., Douelle, F., Bowdy, K. & Stevens, E. D. (2002). Tetrahedron Lett. 43, 5361–5365.
  6. Marjani, K., Asgarian, J., Mousavi, M. & Amani, V. (2009). Z. Anorg. Allg. Chem. 635, 1633–1637.
  7. Sheldrick, G. M. (2004). SADABS University of Göttingen, Germany.
  8. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814007077/zs2293sup1.cif

e-70-0m173-sup1.cif (18.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814007077/zs2293Isup2.hkl

e-70-0m173-Isup2.hkl (142.7KB, hkl)

CCDC reference: 994407

Additional supporting information: crystallographic information; 3D view; checkCIF report


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