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Monte Carlo time-evolution of the average knotting probabilities of the natively-knotted AOTCase and of the unknotted OTCase starting from unfolded conformations up to a stage when about 35% of the native contacts are formed. For each protein, it the average knotting probability is shown as observed when using a purely native-centric force field and with the addition of non-native quasichemical interactions. Adapted with permission from [35].
