Table 2.
Summary of characters analyzed and likelihood parameters for model selection with primers for three mitochondrial loci.
| 12s | 16s | COI | Concatenated | |
|---|---|---|---|---|
| Number bp alignment informative sites | 395 | 497 | 606 | 1498 |
| Forward primer | ||||
| 5′-3′ | AAACTGGGATTAGA | CGCCTGTTTATCAAAAACAT | CCGCTTAACTCTCAGCCATC | √ |
| Reverse primer | ||||
| 5′-3′ | GAGGGTGACGGGCG | CCGGTCTGAACTCAGATCACG | TCAGGGTGACCAAAGAATCA | √ |
| Source | Tinti 2003 | Tinti 2003 | Spies et al. 2006 | |
| MrModeltest | ||||
| hLRT-1 | TrN+G | TrN+I+G | HKY+I+G | TrN+I+G |
| AIC | GTR+G | GTR+I+G | TrN+I+G | GTR+I+G |
| Model selected | ||||
| A | 0.3341 | 0.3638 | 0.3171 | 0.3167 |
| C | 0.2371 | 0.2019 | 0.2658 | 0.2447 |
| G | 0.1874 | 0.1547 | 0.1439 | 0.1504 |
| T | 0.2414 | 0.2796 | 0.2732 | 0.2882 |
| Ts/Tv | ||||
| pINVAR | 0 | 0.2956 | 0.5736 | 0.5341 |
| Gamma | 0.1874 | 0.4351 | 0.9902 | 0.64 |
Bold represents the model selected based on the AIC in MrModeltest. ffff