Abstract
Recently we have shown that the highly conserved herpes simplex virus glycoprotein K (gK) binds to signal peptide peptidase (SPP), also known as minor histocompatibility antigen H13. In this study we have demonstrated for the first time that inhibitors of SPP, such as L685,458, (Z-LL)2 ketone, aspirin, ibuprofen and DAPT, significantly reduced HSV-1 replication in tissue culture. Inhibition of SPP activity via (Z-LL)2 ketone significantly reduced viral transcripts in the nucleus of infected cells. Finally, when administered during primary infection, (Z-LL)2 ketone inhibitor reduced HSV-1 replication in the eyes of ocularly infected mice. Thus, blocking SPP activity may represent a clinically effective and expedient approach to the reduction of viral replication and the resulting pathology.
Keywords: virus replication, glycoprotein K (gK), (Z-LL)2 Ketone, nucleus
INTRODUCTION
HSV-1 encodes at least 85 genes and 12 of these genes code for glycoproteins (Barnett et al., 1992; Ghiasi et al., 1998; McGeoch et al., 1988; Spear, 2004; Spear et al., 2000), one of which is glycoprotein K (gK) (Ghiasi et al., 1994b; Hutchinson et al., 1992; McGeoch et al., 1988). gK is encoded by the UL53 open reading frame and is a highly hydrophobic 338-amino-acid protein with a predicted molecular mass of 37-kDa (McGeoch et al., 1988). gK from HSV-1 and HSV-2 are both 338 amino acids long with approximately 84% amino acid homology (Dolan et al., 1998; McGeoch et al., 1991; McGeoch et al., 1988). gK has a cleavable 30-amino-acid amino-terminal signal sequence and is N-glycosylated on amino acids 48 and 58 (Debroy et al., 1985; McGeoch et al., 1988; Ramaswamy and Holland, 1992). In HSV-1-infected cells gK is expressed as a 39 kDa high-mannose precursor polypeptide, designated precursor gK, which is further glycosylated to produce a 41 kDa mature glycoprotein (Hutchinson et al., 1992).
When we expressed gK using a recombinant baculovirus system, four gK-related baculovirus-expressed polypeptides of 29-, 35-, 38- and 40-kDa were detected (Ghiasi et al., 1994b). The 35-, 38-, and 40-kDa species were susceptible to tunicamycin treatment revealing that they were N-linked glycosylated, the 35-kDa protein represented the cleaved and partially glycosylated peptide, while the 29-kDa protein represented the cleaved unglycosylated protein. gK translated in vitro has a molecular mass of 36-kDa with three (Mo and Holland, 1997; Ramaswamy and Holland, 1992) to four (Foster et al., 2003) predicted membrane-spanning regions.
Studies using insertion/deletion mutants have shown the importance of gK in virion morphogenesis and egress (Foster and Kousoulas, 1999; Hutchinson and Johnson, 1995; Hutchinson et al., 1995). gK is also required for virus replication (Foster and Kousoulas, 1999; Hutchinson and Johnson, 1995), a concept that is supported by the observation that gK-deficient virus can only be propagated on complementing cells which express gK (Foster and Kousoulas, 1999; Hutchinson and Johnson, 1995). Although gK is not involved in virus attachment or penetration, it is involved in virus entry as entry substantially slower in the absence of gK (Foster and Kousoulas, 1999; Hutchinson and Johnson, 1995; Jambunathan et al., 2011). Recently we have shown that the virus replication function of gK is dependent on signal peptide peptidase (SPP) (Allen et al., 2014). SPP, also known as minor histocompatibility antigen H13, is a member of the intramembrane cleaving proteases family. SPP cleaves peptide bonds within the plane of the lipid bilayer (Lemberg and Martoglio, 2002; Weihofen et al., 2002) and is highly conserved between human and mouse (Golde et al., 2009). SPP localizes predominantly to the endoplasmic reticulum and exists in different forms depending on its glycosylation status (Grigorenko et al., 2002). Unlike other family members, SPP appears to achieve enzyme activity in the absence of protein cofactors (Sato et al., 2006; Weihofen et al., 2002). SPP has been linked to pathogenic conditions such as Alzheimer’s disease (Esler et al., 2002), certain cancers (Taniguchi et al., 2003), and HCV infection (McLauchlan et al., 2002; Okamoto et al., 2004).
Recently we have shown that SPP dominant negative mutants and shRNA against SPP significantly reduced HSV-1 replication in vitro (Allen et al., 2014). In addition to the use of dominant negative mutants and shRNA (Okamoto et al., 2004), blocking the interaction of viral protein with SPP using SPP inhibitors has been suggested as an alternative anti-viral treatment (Dovey et al., 2001; Lanz et al., 2003; Li et al., 2000; Seiffert et al., 2000; Targett-Adams et al., 2006). Thus, in this study we used a panel of different SPP inhibitors to evaluate their potential to block or reduce HSV-1 infectivity in vitro and in vivo and we have shown for the first time that: 1) inhibitors of SPP enzyme catalysis significantly reduced HSV-1 replication in vitro by blocking the transcription of viral DNA in the nucleus of infected cells; and 2) SPP is required for virus infectivity in vivo. These results highlight the importance of SPP in HSV-1 infectivity in vitro and in vivo. Thus, blocking SPP activity may represent an alternative approach to the reduction of viral replication and the resulting pathology.
Materials and Methods
Virus, cells, and mice
Triple plaque-purified HSV-1 strain McKrae was grown in RS (rabbit skin) cell monolayers as described previously (Ghiasi et al., 1994b). RS cells were grown in minimal essential medium (MEM) plus 5% fetal calf serum (FCS). Female BALB/c and C57BL/6 mice (6-weeks of age) were purchased from The Jackson Laboratories. All animal procedures adhered to the Association for Research in Vision and Ophthalmology (ARVO) statement for the Use of Animals in Ophthalmic and Vision Research and according to institutional animal care and use guidelines.
SPP chemical inhibitors
There are several chemicals that have been shown to inhibit the proteolytic activity of SPP. We selected the following SPP inhibitors for analysis of their effects on HSV-1 replication: A) L685,458 (1S-Benzyl-4R-[1-(1S-carbamoyl-2-phenethylcarbamoyl)-1S-3-methylbutylcarbamoyl]-2R-hydroxy-5-phenylpentyl) carbamic Acid tert-butyl Ester) (Tocris Bioscience, Ellisville, MO); B) (Z-LL)2 ketone (Calbiochem, San Diego, CA); C) DAPT (N-[(3,5-Difluorophenyl)acetyl]-L-alanyl-2-phenyl]glycine-1,1-dimethylethyl ester) (Tocris Bioscience, Ellisville, MO); D) Aspirin (Sigma Aldrich, Saint Louis, MO); and E) Ibuprofen (Sigma Aldrich). We tested different concentrations of each inhibitor and chose concentrations specific for SPP inhibition which caused no toxicity in Vero, HeLa or RS cell lines as determined by tryptan blue staining and direct observation of cytotoxicity from 0 to 48 hours (hr) post-treatment. Concentrations of inhibitors used were as follows: 1μm L685,458; 20.0 μm (Z-LL)2 ketone; 150 μm DAPT; 250 μm aspirin; and 100 μm ibuprofen. Ibuprofen was diluted in ethanol, while the rest of the inhibitors were diluted in DMSO. No toxicity was reported with the use of these compounds in mice, rats, or tissue cultures (Dev et al., 2006; Dovey et al., 2001; Jeong et al., 2011; Li et al., 2009; Shearman et al., 2000; Weihofen et al., 2000; Zara et al., 2013). In addition, all of the compounds that we have used in this study have been shown to have high membrane permeability (Gutknecht, 1992; Kang et al., 2004; Marks and Berg, 2008; Weihofen et al., 2000).
RS cells were pre-treated with each inhibitor 2 hr prior to HSV-1 infection with 0.1 or 1.0 PFU/cell of HSV-1 strain McKrae for 1 hr at 37°C. C ells were then washed 3 times with 1X PBS and medium plus inhibitor was added back to the infected cells. Infected cells were harvested at 12, 24 and 36 hr post-infection (PI) and virus titers determined by standard plaque assay on RS cells. In addition, as a negative control for the above experiments the effect of each inhibitor on HSV-1 replication was measured by direct incubation with different concentrations of each inhibitor with HSV-1. Briefly, HSV-1 was pre-treated with each inhibitor for 1 hr at 37°C. After incubation, virus was added to RS cells without any inhibitor for 48 hr and titers were determined by standard plaque assay.
In vivo administration of inhibitors
Mice received 100 μg of (Z-LL)2 ketone or DAPT as an eye drop in 5 μl of DMSO 1 hr before ocular infection and at 2, 4, 6 and 8 hr PI. (Z-LL)2 ketone administration was repeated 5 times daily for 4 consecutive days. Sham control mice were treated similarly using 5 μl of DMSO alone. For ocular infection, mice were infected in both eyes without scarification or anesthesia by placing eye drops containing 2 × 104 PFU of HSV-1 strain McKrae in 2 μl of tissue culture medium. Eyes were swabbed once daily with a Dacron swab (Spectrum type 1) prior to administering the (Z-LL)2 ketone. The swab was transferred to a culture tube containing 1 ml of medium, frozen, thawed, and virus titers determined by standard plaque assay on RS cells as above.
Cell fractionation
RS cells were cultured in MEM containing 5% FCS. The day before the experiment, approximately 8 × 108 cells were plated on 100-mm tissue culture dishes and cultured overnight in regular culture medium or medium containing 20 μm (Z-LL)2 ketone. The following day the medium was replaced with fresh medium with or without (Z-LL)2 ketone and the cells were infected with 0.1 PFU/cell of HSV-1 strain McKrae. At one hr PI, cells were washed to remove free virus and fresh medium was added with or without (Z-LL)2 ketone. At 2, 4, and 12 hr PI, cells were harvested and partitioned into nuclear and cytoplasmic fractions with subsequent isolation of total RNA using the Protein and RNA Isolation System (PARIS Kit AM1921, Life Technologies, Grand Island, NY) as per manufacturer protocol.
Gene expression analyses
Quantitative real-time PCR (qRT-PCR) was performed as we have described previously (Allen et al., 2011). The differences in the expression levels of mRNAs were evaluated using custom-made TaqMan gene expression primers against ICP0, gB and gK with optimized primer and probe concentrations (Life Technologies, Grand Island, NY). Primer probe sets consisted of two unlabeled PCR primers and the FAM™ dye-labeled TaqMan MGB probe formulated into a single mixture. Additionally, all cellular amplicons included an intron-exon junction to eliminate signal from genomic DNA contamination. The assays used in this study were as follows: 1) gB specific primers (forward, 5′-AACGCGACGCACATCAAG-3′; Reverse - 5′-CTGGTACGCGATCAGAAAGC-3′; and Probe - 5′-FAM-CAGCCGCAGTACTACC-3′) with amplicon length of 72 bp; 2) ICP0 specific primers (forward, 5′- CGGACACGGAACTGTTCGA-3′; reverse, 5′-CGCCCCCGCAACTG-3′; and probe, 5′-FAM-CCCCATCCACGCCCTG-3′) with amplicon length of 111 bp; and 3) gK specific primers (forward, 5′-GGCCACCTACCTCTTGAACTAC-3′; reverse primer, 5′-CAGGCGGGTAATTTTCGTGTAG-3′; and probe, 5′-FAM-CAGGCCGCATCGTATC-3′) with amplicon length of 82 bp. As an internal control, a set of GAPDH primers from Applied Biosystems (ASSAY I.D. m999999.15_G1 - Amplicon Length = 107 bp) was used.
The relative copy numbers for ICP0, gB, and gK mRNAs were calculated using standard curves generated from the plasmids pGem-ICP0, pAc-gB1, and pAC-gK1. In all experiments, GAPDH was used for normalization of transcripts. The inhibitors had no effect on GAPDH mRNA expression. qRT-PCR was performed using an ABI ViiA7 sequence detection system (Applied Biosystems). The threshold cycle values, which represent the PCR cycles at which there is a noticeable increase in the reporter fluorescence above baseline, were determined using ViiA7 RUO software.
Statistical analysis
Student’s t-tests were performed using the computer program Instat (GraphPad, San Diego). Results were considered statistically significant when the P value was <0.05.
RESULTS
SPP inhibitors reduce HSV-1 replication in vitro
Recently we have shown that both SPP shRNA and SPP dominant negative mutants reduced virus replication in vitro (Allen et al., 2014). Many forms of γ-secretase inhibitors interfere with SPP activity and are of potential interest as therapeutics for Alzheimer’s disease (Wolfe, 2009). The majority of commercially available SPP inhibitors, including the ones that we have chosen, have been studied extensively in cell lines (Bihel et al., 2004; Das et al., 2003; Esler et al., 2002; Weggen et al., 2001). Based on the reported safety and efficacy studies (Okamoto et al., 2008; Weihofen et al., 2003), we have selected aspirin, ibuprofen, (Z-LL)2 ketone, L685,458, and DAPT to test our hypothesis that SPP inhibitors would reduce HSV-1 replication similar to the SPP shRNA and SPP dominant negatives that we reported recently (Allen et al., 2014).
We tested different concentrations of each inhibitor and chose concentrations which caused no toxicity in HeLa, Vero or RS cell lines as determined by trypan blue staining and direct observation of cytotoxicity from 0 to 48 hr post-treatment. To determine the effect of SPP inhibitors on virus replication in vitro, RS cells were incubated with inhibitor before and after infection with 0.1 PFU/cell of HSV-1 strain McKrae and titer was determined by plaque assay at various times PI. Virus yield in the presence of aspirin (Fig. 1A), ibuprofen (Fig. 1B), (Z-LL)2 ketone (Fig. 1C), L685,458 (Fig. 1D), and DAPT (Fig. 1E) were reduced as compared to mock-treated control cells. Our results also suggest that ibuprofen had the greatest effect on reducing virus replication (Fig. 1B). Similar results were also obtained using 1 PFU/cell of HSV-1 (data not shown). In addition, HSV-1 was incubated alone with each inhibitor to verify that the observed effects were not due to inactivation of the virus by the inhibitor. As expected direct incubation of HSV-1 with each inhibitor showed no side effect on virus titer (not shown). Thus, these results demonstrate that HSV-1 replication requires functional SPP in vitro and that chemical inhibitors are able to reduce HSV-1 replication in vitro. Similar to our finding, previously it was shown that both (Z-LL)2 ketone and L-685,458 effectively inhibited malaria parasite invasion as well as growth in human erythrocytes (Li et al., 2009).
Viral gene expression is reduced in the nucleus of infected cells in the presence of SPP inhibitor
The transcription of viral DNA takes place in the nucleus of infected cells and our in vitro results suggest that SPP inhibitors reduced virus replication in infected RS cells (Fig. 1). To determine if this significant reduction in virus replication specifically involved viral gene expression, we sought to determine if SPP inhibition altered transcription of viral genes in the nucleus of infected cells. As (Z-LL)2 ketone was the most specific SPP inhibitor in our panel (Nyborg et al., 2006; Okamoto et al., 2008), we infected RS cells in the presence and absence of (Z-LL)2 ketone. At various times PI, infected cells were fractionated into nuclear and cytoplasmic fractions. qRT-PCR was performed on total RNA isolated from each fraction as described in Materials and Methods. We detected significant reductions in ICP0 (Fig. 2A), gB (Fig. 2B), and gK (Fig. 2C) expressions in the presence of (Z-LL)2 ketone compared with mock-treated control cells. Since ICP0 is a transcriptional regulator of gene expression its reduced expression may also reduce gB and gK expressions. However, this reduction in gB and gK expressions is probably independent of ICP0, as our published results suggest that inhibition of SPP directly suppresses HSV-1 replication by blocking the binding of gK to SPP (Allen et al., 2014). In contrast to the differences that we observed in expression of viral transcripts in the nuclear fraction of infected cells in the presence of (Z-LL)2 ketone, expression of ICP0 (Fig. 3A), gB (Fig. 3B), and gK (Fig. 3C) mRNAs in the cytoplasmic fraction of infected cells were not reduced in the presence of (Z-LL)2 ketone compared with mock-treated control cells. Interestingly, the levels of ICP0 (Fig. 3A) and gK (Fig. 3C) but not gB (Fig. 3B) increased by 12 hr PI in the presence of inhibitor compared with control group. The results indicate that selective cytoplasmic accumulation of some of the viral transcripts correlates with blocking SPP synthesis. Thus, our results with regards to the cytoplasmic fraction suggest that the net mRNA transport to the cytoplasm was not adversely affected at the time points tested in our study. Taken together, our results show that HSV-1 gene expression is impaired in the nucleus but not cytoplasm of infected cells when SPP activity is inhibited.
SPP inhibitor reduces virus replication in vivo
Collectively, our in vitro results suggest that SPP inhibitors reduced virus replication in infected RS cells (Fig. 1). We next tested whether the most specific SPP inhibitor, (Z-LL)2 ketone would also reduce HSV-1 replication in vivo. (Z-LL)2 ketone was given to C57BL/6 mice (100 μg/eye as an eye drop, 5X/day for 4 consecutive days), starting 1 hr before ocular infection with HSV-1 strain McKrae. Control mice received DMSO as an eye drop. (Z-LL)2 ketone significantly decreased virus replication in the eyes of infected mice on days 1-5 PI (Fig. 3A) (P <0.001, Student’s t-test compared to the sham control). Similar results were obtained with BALB/c mice treated with (Z-LL)2 ketone compared with sham control mice on both days 1 and 3 PI (Fig. 3B). Thus, consistent with our in vitro results (Fig. 1), SPP inhibition by (Z-LL)2 ketone treatment decreased viral replication in tears of ocularly infected mice.
DISCUSSION
HSV-1-induced corneal scarring (CS), also broadly referred to as herpes stromal keratitis, can lead to blindness and HSV-1 is the leading cause of corneal blindness due to an infectious agent in developed countries (Barron et al., 1994; Dawson, 1984; Hill, 1987; Liesegang, 1999, 2001; Wilhelmus et al., 1996). In the U.S., approximately 30,000 people suffer recurrent ocular HSV episodes annually, requiring doctor visits, medication, and in severe cases, corneal transplants. It is estimated that 70-90% of American adults have antibodies to HSV-1 and/or HSV-2 and about 25% of these individuals have clinical symptoms upon routine clinical inquiry (Barron et al., 1994; Dawson, 1984; Hill, 1987; Liesegang, 1999, 2001; Wilhelmus et al., 1996) with HSV-1 being responsible for >90% of ocular HSV infections. A significant proportion (15-50%) of primary genital herpes is caused by HSV-1 and recent studies indicate that the proportion of clinical first episode genital herpes due to HSV-1 is increasing (Auslander et al., 2005; Roberts et al., 2003; Singh et al., 2005). It was recently reported that the global incidence of HSV keratitis is roughly 1.5 million, including 40,000 new cases of severe monocular visual impairment or blindness each year (Farooq and Shukla, 2012).
It is well established that HSV-1-induced CS, and thus HSV-1-induced corneal blindness, are the result of immune responses triggered by the virus (Brandt, 2005; Dix, 2002; Hendricks and Tumpey, 1990; Ksander and Hendricks, 1987; Metcalf and Kaufman, 1976; Thomas and Rouse, 1997). However, the exact identity of the immune responses, including the fine specificity of the potentially harmful T cell effectors expressing classic TCRαβ antigen receptors that lead to CS, remains an area of intense controversy (Banerjee et al., 2002; Huster et al., 2002; Zhao et al., 1998).
At present time there is no vaccine available to control HSV-1 infection and spread. In the past two decades several large clinical HSV vaccine trials were performed but both vaccine studies failed to reach their goals (Awasthi and Friedman, 2014; Farooq and Shukla, 2012). Despite the seriousness of recurrent ocular herpes, no drug has been FDA approved for prevention of ocular recurrences. In addition, the wide use of acyclovir and its homolog in the treatment of both HSV-1 and HSV-2 has raised concern over the development of resistant subtypes of HSV (Antoine et al., 2013; Farooq and Shukla, 2012). Previously it was shown that there is a high prevalence of acyclovir-resistant HSV-1 isolates in patients with HSK (Duan et al., 2008). Thus, the absence of a viable vaccine against the virus and the increase in incidence of resistance to acyclovir and its homolog adds to the critical need for the development of alternative approaches for the prevention and control of serious HSV-1-induced ocular diseases.
Recently we have shown that HSV-1 gK binds to SPP and that blocking of SPP through dominant negative mutants or SPP shRNA reduced viral replication in vitro (Allen et al., 2014). Our published study also demonstrated that gK is the only HSV-1 gene that binds to SPP in vitro. There are several chemicals that have been shown to inhibit the function of SPP. Many forms of γ-secretase inhibitors interfere with SPP activity and are of potential interest as therapeutics in Alzheimer’s disease, HCV, pestivirus and malarial infection (Dovey et al., 2001; Heimann et al., 2006; Lanz et al., 2003; Li et al., 2009; Okamoto et al., 2008; Seiffert et al., 2000; Weihofen et al., 2003; Wolfe, 2009). The γ-secretase inhibitor LY-450139 is one of the most potent inhibitors and is currently in phase II clinical trials and it appears to be well tolerated in human Alzheimer’s patients (Siemers et al., 2006). While this inhibitor is the only one currently being tested in humans, other SPP inhibitors, such as LY-411,575 (Eli Lilly), BMS-299,897 (Bristol-Meyers Squibb) and DAPT (Eli Lilly) have been studied for their effect in vivo (Best et al., 2005; Dovey et al., 2001; Siemers et al., 2005; Siemers et al., 2006). In this study we have shown for the first time that SPP chemical inhibitors are able to block HSV-1 infectivity in vitro. Similarly our published results clearly demonstrated that SPP and gK can colocalize and bind with one another and blocking this interaction with shRNA reduced virus replication in vitro (Allen et al., 2014). Thus, our results suggest that inhibition of SPP activity reduced virus infectivity. Since gK is involved in exacerbation of CS and eye disease in mice, rabbits and humans (Ghiasi et al., 1997; Ghiasi et al., 1994a; Ghiasi et al., 1994b; Mott et al., 2009; Mott et al., 2007a; Mott et al., 2007b; Osorio et al., 2007), this HSV-1 dependence on SPP may be considered as a specific therapeutic target for the prevention of corneal infection in patients at risk. Overall, the global result of these studies suggests that these inhibitors could be an alternative and expedient anti-viral treatment for control of ocular HSV-1 infection.
ACKNOWLEDGEMENTS
This work was supported by Public Health Service grant 1 RO1 EY13615.
Footnotes
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