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Comparison of BLASTn, BLASTx, and HMMER algorithms for retrieving typical and atypical nosZ reads from the in silico libraries I and II
| Method | In silico library | Sensitivity (%) | Specificity (%) |
|---|---|---|---|
| BLASTn | I | 100.0 | 99.9 |
| II | 100.0 | 99.9 | |
| BLASTx | I | 98.4 | 99.9 |
| II | 98.4 | 99.9 | |
| hmmsearch (protein) | I | 48.9 | 99.9 |
| II | 46.0 | 99.9 |
