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. Author manuscript; available in PMC: 2015 Jun 1.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2014 May 5;23(6):1131. doi: 10.1158/1055-9965.EPI-14-0234

Telomere Length Varies by DNA Extraction Method: Implications for Epidemiologic Research

Lisa A Boardman 1, Halcyon G Skinner 2, Kristin Litzelman 2, on behalf of all the other authors
PMCID: PMC4049326  NIHMSID: NIHMS578563  PMID: 24798728

Response to Letter-to-the-Editor

We thank Hofmann and colleagues for their report corroborating our discovery that the method used to extract DNA from blood cells influences the measurement of telomere length (1). Hoffman and colleagues found that peripheral leukocyte telomere lengths measured by quantitative PCR were significantly longer in DNA that had been extracted by the ReliaPrep™ magnetic bead capture chemistry than in DNA extracted by the QIAamp© column method. This echoes our finding that QIAamp© DNA extraction yielded shorter telomeres than DNA extracted by either liquid phase phenol/chloroform or the salting out method Puregene. In addition, Hofmann and colleagues determined that QIAamp© extracted samples had a higher copy number of mitochondrial (mt)DNA than mt DNA extracted by Reliaprep. We acknowledge their important contribution highlighting that DNA extraction method may impact our ability to compare results across studies of not only telomere length but also with regard to mtDNA copy number.

These new results underscore our conclusion that the use of QIAamp© extracted DNA for telomere length quantification is subject to systematic measurement error that may limit studies in detecting associations between telomere length and outcomes.

References

  • 1.Cunningham JM, Johnson RA, Litzelman K, Skinner HG, Seo S, Engelman CD, Vanderboom RJ, Kimmel GW, Gangnon RE, Riegert-Johnson DL, Baron JA, Potter JD, Haile R, Buchanan DD, Jenkins MA, Rider DN, Thibodeau SN, Petersen GM, Boardman LA. Telomere length varies by DNA extraction method: implications for epidemiologic research. Cancer Epidemiol Biomarkers Prev. 2013 Nov;22(11):2047–54. doi: 10.1158/1055-9965.EPI-13-0409. Epub 2013 Sep 09. [DOI] [PMC free article] [PubMed] [Google Scholar]

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