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. 1995 Dec;48(6):M347–M350. doi: 10.1136/mp.48.6.m347

The role of a nested polymerase chain reaction in the diagnosis of Pneumocystis carinii pneumonia

R Evans 1,2,3, A W L Joss 1,2,3, D Parratt 1,2,3, T H Pennington 1,2,3, D O Ho-Yen 1,2,3
PMCID: PMC408003  PMID: 16696036

Abstract

Aim—To compare the techniques and results of a nested PCR and an immunofluorescence assay (IFA) for the detection of Pneumocystis carinii infection; to consider the role of the nested PCR in the diagnosis of P carinii pneumonia (PCP).

Methods—Serial dilutions of two known P carinii positive samples were tested by IFA and PCR to determine their relative sensitivities. Seventy eight respiratory samples (15 from 11 patients with HIV infection/acquired immunodeficiency syndrome (AIDS) and 63 from 42 patients with other forms of immunodeficiency) were tested using both assays, and the costs and technical requirements of each assay were assessed.

Results—The PCR had a greater relative sensitivity over the IFA of 2 × 101 to 2 × 103 fold in a postmortem lung sample and 2 × 105 to 2 × 106 fold in a bronchoalveolar lavage sample from a patient with PCP. P carinii was detected in all 15 samples from the patients with HIV/AIDS by both IFA and PCR. Of the 63 samples from the patients with immunodeficiencies other than HIV/AIDS, the PCR was more sensitive than IFA.

Conclusions—The nested PCR is a more sensitive assay than the IFA. It may be useful in the diagnosis of PCP in patients with immunodeficiencies other than HIV/AIDS. Similarly, PCR may be of benefit for this patient group as less invasive specimens are needed. PCR has an increasing role to play in the diagnosis of PCP in the routine laboratory.

Keywords: Pneumocystis carinii

Keywords: PCR

Keywords: immunofluorescence assay

Keywords: acquired immunodeficiency syndrome

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M347

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Blumenfeld W., Miller C. N., Chew K. L., Mayall B. H., Griffiss J. M. Correlation of Pneumocystis carinii cyst density with mortality in patients with acquired immunodeficiency syndrome and pneumocystis pneumonia. Hum Pathol. 1992 Jun;23(6):612–618. doi: 10.1016/0046-8177(92)90315-t. [DOI] [PubMed] [Google Scholar]
  2. Chatterton J. M., Yen D. O. Laboratory investigation of Pneumocystis carinii pneumonia. Genitourin Med. 1992 Oct;68(5):336–341. doi: 10.1136/sti.68.5.336. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Evans R., Joss A. W., Pennington T. H., Ho-Yen D. O. The use of a nested polymerase chain reaction for detecting Pneumocystis carinii from lung and blood in rat and human infection. J Med Microbiol. 1995 Mar;42(3):209–213. doi: 10.1099/00222615-42-3-209. [DOI] [PubMed] [Google Scholar]
  4. Kovacs J. A., Hiemenz J. W., Macher A. M., Stover D., Murray H. W., Shelhamer J., Lane H. C., Urmacher C., Honig C., Longo D. L. Pneumocystis carinii pneumonia: a comparison between patients with the acquired immunodeficiency syndrome and patients with other immunodeficiencies. Ann Intern Med. 1984 May;100(5):663–671. doi: 10.7326/0003-4819-100-5-663. [DOI] [PubMed] [Google Scholar]
  5. Limper A. H., Offord K. P., Smith T. F., Martin W. J., 2nd Pneumocystis carinii pneumonia. Differences in lung parasite number and inflammation in patients with and without AIDS. Am Rev Respir Dis. 1989 Nov;140(5):1204–1209. doi: 10.1164/ajrccm/140.5.1204. [DOI] [PubMed] [Google Scholar]
  6. Masur H., Jones T. C. The interaction in vitro of Pneumocystis carinii with macrophages and L-cells. J Exp Med. 1978 Jan 1;147(1):157–170. doi: 10.1084/jem.147.1.157. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Wakefield A. E., Miller R. F., Guiver L. A., Hopkin J. M. Granulomatous Pneumocystis carinii pneumonia: DNA amplification studies on bronchoscopic alveolar lavage samples. J Clin Pathol. 1994 Jul;47(7):664–666. doi: 10.1136/jcp.47.7.664. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Wakefield A. E., Pixley F. J., Banerji S., Sinclair K., Miller R. F., Moxon E. R., Hopkin J. M. Detection of Pneumocystis carinii with DNA amplification. Lancet. 1990 Aug 25;336(8713):451–453. doi: 10.1016/0140-6736(90)92008-6. [DOI] [PubMed] [Google Scholar]

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