Abstract
Chronic Granulomatous Disease (CGD), caused by genetic defects in components of the phagocyte NADPH oxidase pathway, leads to recurrent life-threatening bacterial and invasive fungal infections. While a number of unique pathogens have been associated with this disease, the causative organisms may be difficult to identify. Here, we present a 24 year old male with known X-linked CGD who concurrently developed a cervical abscess and an abscess in the subcutaneous tissues of the right hip, both of which were surgically drained. Cultures failed to identify any organisms. He was treated empirically with ertapenem but the hip abscess recurred at the original site and in contiguous dependent areas in the posterior thigh and knee. A filamentous organism was observed microscopically, initially considered a contaminant, but on culture yielded a mold growth, identified as Phellinus tropicalis (synonym: Inonotus tropicalis) based on phenotypic and molecular methods. This is the third case report of human infection with P. tropicalis, all in subjects with CGD. The patient was treated with voriconazole with resolution of his symptoms.
Keywords: Chronic granulomatous disease, Phellinus tropicalis, abscess, voriconazole
Introduction
Chronic granulomatous disease (CGD), caused by mutations in one of the protein subunits of NADPH oxidase, leads to defects in neutrophil function, and presents with recurrent bacterial and fungal infections. Pneumonia, suppurative adenitis and soft tissue abscesses are the most common infectious presentations [1]. The most common pathogens include Aspergillus sp., Staphylococcus, Burkholderia sp., Serratia and Nocardia [1, 2]. Invasive fungal infections have been the most significant cause of mortality in these patients though this has improvedwith the standard institution of itraconazole prophylaxis [3-5]. While it has been often difficult to identify organisms in each case [6], several novel and emerging pathogens have been reported, and are considered pathognomonic for CGD [2]. Examples include bacteria such as Burkholderia sp [1, 7]. and Granulibacter bethesdensis [8, 9], and fungi such as Paecilomyces [10, 11], Aspergillus nidulans [12, 13] and Neosartorya udagawae [13] In this report we describe infection in a patient with CGD caused by a novel opportunistic fungal pathogen; Phellinus tropicalis (synonym: Inonotus tropicalis).
Case
Here we present a 24 year old Hispanic man who was diagnosed with X-linked CGD at age three when he had a S. aureus liver abscess. He was placed on standard sulfamethoxazoletrimethoprim and later, itraconazole prophylaxis, but was often non-compliant. While being evaluated for bone marrow transplant, he was found to have asymptomatic pulmonary aspergillosis at age 16 and was treated for this infection. Based on non-compliance, transplant was not performed but he remained well for the following 7 years on intermittent sulfamethoxazole-trimethoprim and itraconazole. At this time, he developed pain and swelling of the left side of his neck with odynophagia and dysphagia to solids. A contrast CT scan showed retropharyngeal edema without any discrete abscess or lymphadenopathy (Fig. 1a, b). Blood cultures drawn on admission grew pan- susceptible Streptococcus constellatus. He was treated with amoxicillin-clavulanate, which lead to resolution of his dysphagia and odynophagia but he developed increased firmness and had continued cervical pain and swelling over the following month. A contrast CT of his neck was performed. A lobulated abscess had formed in the region of his previous edema with potential airway compromise (Fig. 1c, d). At the same time, he had a new large painful, swelling of his right hip region. MRI of his hip showed a large abscess within the subcutaneous tissues of the lateral soft tissues of the hip, and smaller abscesses in the proximal hamstring musculature with associated myositis (Fig. 1e, f). There was no evidence of osteomyelitis. The neck and the hip abscesses were drained and intravenous antibiotic therapy with vancomycin and piperacillin-tazobactam was initiated. A repeat ultrasound showed extension of the infection into the hamstrings towards the knee not amenable to drainage. He was switched to ertapenem 1 g daily for ease of home infusion and discharged.
Fig. 1.

a, b CT neck with contrast showing retropharyngeal fluid and edema (black arrow) within the oropharynx and hypopharynx without discrete abscess, bilateral cervical lymphadenopathy and mediastinal lymphadenopathy. c, d CT neck with contrast showing resolution of inflammatory changes, a lobulated abscess (27 mm in greatest diameter) in the region of the previously noted edema (black arrow). There was swelling of the left aryepiglottic fold and airway compromise (white arrow). Lymphadenopathy was unchanged. e, f MRI of hip with contrast of hip. STIR (short t1 inversion recovery) axial (e) and coronal (f) images show a STIR signal bright lesion within the lateral soft tissues of the right hip which demonstrates peripheral irregular enhancement (black arrows), likely representing an abscess (7.1 cm×12.9 cm×8.8 cm). Additional smaller lesions were seen (black arrows). g CT with contrast of bilateral lower extremities (g) coronal and (h) axial images showing multiple (at least 4) oval low-attenuation lesions with surrounding rim enhancement in the right posterior thigh muscles, consistent with posterior muscle group abscesses (black arrows). The largest collection was 5.2 cm× 10.5 cm×1.9 cm in size
Cultures remained negative
He returned a week later with worsening pain in the hamstring muscles. A CT scan showed multiple oval shaped abscesses in the posterior muscles of the right thigh (Fig. 1g, h). A CT guided aspiration was performed. Cultures remained negative during this hospitalization and ertapenem and prophylactic itraconazole were continued. Sustained improvement was noted and after 5 weeks of therapy, ertapenem was stopped. Three weeks after stopping therapy he presented with progressive pain, swelling in his right popliteal area and restriction of movement. An ultrasound showed a complex fluid collection extending along the posterior aspect of the right thigh from the proximal thigh to just below the knee. Cultures of the aspirate from his hip abscess, from his previous admission, that were previously negative, were noted to be growing a yet to be identifiedmold. The lesion was drained and the new cultures also grew a yellow-brown filamentous mold exhibiting branched septate hyphae that could not be identified by its phenotypic characteristics alone as this fungus did not sporulate on any of the medi tested (Fig. 2a, b). Cultures grew mold in 20 days in Sabouraud dextrose agar (SDA) containing antibacterials. The isolate was submitted to Mycology Laboratory, New York State Department of Health for further characterization. Although, this fungus grew slowly on rich medium like SDA but comparative analysis indicated that it grew relatively faster at body temperature of 37 ° C than at 30 ° C or at 25 ° C. Since this fungus did not sporulate on any of the media tested, the identification of the isolate was established by molecular methods. In brief, DNA from the isolate was extracted using MasterPure DNA/RNA extraction kit (Epicenter, Madison, WI, USA) with slight modification as described previously [14] followed by amplification of the internal transcribed spacer (ITS) regions (ITS1, 5.8S, and ITS2) using primer set V1827 5’-GGAAGTAAAAGTCGTAACAAGG-3’ and V50 5’-TCCTCCGCTTATTGATATGC-3’ and nuclear large-subunit rRNA gene using primer set V1799 5’-GGTCCGTG TTTCAAGACGG-3’ and V1798 5’- GCATATCAATAAGC GGAGGAAAAG-3’. The PCR amplicons were sequenced, assembled, and edited using Sequencher Software 4.5 (Gene Codes Corp., Ann Arbor, MI, USA) and BLAST searched against two databases; GenBank (www.ncbi.nlm.nih.gov/) and Centraalbureau voor Schimmelcultures (www.cbs.knaw.nl/yeast/BioloMICSSequences.aspx). The nucleotide sequences for ITS and large-subunit rRNA gene were deposited in the GenBank with accession numbers KF695121 and KF695122, respectively. Voriconazole (200 mg twice daily) was started empirically while speciation was being performed. He was continued on voriconazole with clinical resolution of symptoms.
Fig. 2.

a Photomicrograph of lactophenol blue stained hyphae showing a smooth-walled hyaline mold of Phellinus tropicalis. b Phellinus tropicalis growth on Sabouraud dextrose agar: the growth of P tropicalis at 14-days post incubation at different temperatures. The morphology on obverse (i, iii, v) and on reverse (ii, iv, vi) is shown. Maximal pigment production is seen at 30 ° C. Themorphology is typical of a basidiomycete
A retrospect analysis of in-vitro antifungal susceptibility testing of P. tropicalis using E-test method indicated that this isolate was susceptible to amphotericin B (0.25 μg/ml) and several of the azole drugs including voriconazole (0.032 μg/ ml) posaconazole (0.12 μg/ml), itraconazole (0.03 μg/ml) and fluconazole (4 μg/ml). This isolate was resistant to caspofungin (>32 mg/ml), which is not surprising considering that this isolate is a Basidiomycete.
Discussion
This case highlights the complexity of managing infections in CGD. Organisms that cause opportunistic infections are often uncommon and difficult to culture. The blood culture isolate Streptococcus constellatus was never isolated from any of the abscesses and may have been a contaminant. After several unsuccessful attempts we were able to culture P.s tropicalis (synonym: Inonotus tropicalis), a wood decaying fungus of the family Basidiomycetes. The presence of an unusual mold in culture can lead to the suspicion of contamination of the culture. However, here the fungus was isolated in cultures taken at separate times a month apart confirming its presence in the abscess. Its role in the pathogenesis is further affirmed by its ability to grow at 37 ° C and the dramatic clinical response seen after the appropriate therapy, voriconazole, was instituted. Cultures from the neck abscess did not grow any organisms and though it was at an anatomically distinct site it bears a temporal relationship to the hip lesion. This points to one of the challenges in the diagnosis of infections in CGD where multiple abscesses can occur and cultures are not always indicative of causative organism.
There are only two other reports of this organism causing human infection. Both documented osteomyelitis in patients of CGD [15-17]. With these three reports all in patients with CGD we propose that infection with this organism be considered pathognomonic of CGD. This infection has an insidious course with the development of extensive tissue involvement [15-17]. While one patient responded to voriconazole and was disease free for at least 1 year, the other patient had not cleared the infection despite 7 years of multi-drug anti-fungal therapy [15]. Previous reports have suggested that this infection developed while on prophylaxis with itraconazole [15, 16]. Though antifungal susceptibilities were not available at the time of instituting therapy, voriconazole was effective in controlling this infection. Subsequent analysis has confirmed in vitro susceptibility. Posaconazole has been studied in patients with pulmonary invasive fungal infections who have failed prior therapy and has been proposed as an alternative agent for prophylaxis and could be considered as an alternative therapy [3, 5].
Contributor Information
Manish Ramesh, Departments of Medicine and Pediatrics, The Immunology Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, Box 1089, New York, NY 10029, USA.
Elena Resnick, Departments of Medicine and Pediatrics, The Immunology Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, Box 1089, New York, NY 10029, USA.
Yiqun Hui, Departments of Medicine and Pediatrics, The Immunology Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, Box 1089, New York, NY 10029, USA.
Paul J. Maglione, Departments of Medicine and Pediatrics, The Immunology Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, Box 1089, New York, NY 10029, USA
Harshna Mehta, Departments of Medicine and Pediatrics, The Immunology Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, Box 1089, New York, NY 10029, USA.
Jacob Kattan, Departments of Medicine and Pediatrics, The Immunology Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, Box 1089, New York, NY 10029, USA.
Nicole M. Bouvier, Departments of Medicine and Pediatrics, The Immunology Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, Box 1089, New York, NY 10029, USA
Tanya R. Victor, New York State Department of Health, Mycology Laboratory, Wadsworth Center, Albany, NY 12208, USA
Sudha Chaturvedi, New York State Department of Health, Mycology Laboratory, Wadsworth Center, Albany, NY 12208, USA.
Charlotte Cunningham-Rundles, Departments of Medicine and Pediatrics, The Immunology Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, Box 1089, New York, NY 10029, USA, Charlotte.cunningham-rundles@mssm.edu.
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