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. Author manuscript; available in PMC: 2014 Jul 8.
Published in final edited form as: Acta Neuropathol. 2012 Jul 8;124(3):449–451. doi: 10.1007/s00401-012-1011-7

Low rate of R132H IDH1 mutation in infratentorial and spinal cord grade II and III diffuse gliomas

Benjamin Ellezam 1,, Brett J Theeler 2, Tobias Walbert 3, Aaron G Mammoser 4, Craig Horbinski 5, Bette K Kleinschmidt-DeMasters 6, Arie Perry 7, Vinay Puduvalli 8, Gregory N Fuller 9, Janet M Bruner 10, Kenneth D Aldape 11
PMCID: PMC4085739  NIHMSID: NIHMS593521  PMID: 22772980

Diffuse gliomas not only are more frequent in the cerebral hemispheres but also occur in the brainstem, cerebellum, and spinal cord. In adult populations, 5 % or less localize to the infratentorium [6, 14]. Primary tumors of the spinal cord are uncommon and only 2.5 % are diffuse gliomas [6]. In the brainstem, many gliomas are diagnosed solely by radiology and even when a biopsy is obtained it tends to be of minute size, rendering interpretations challenging. Accurate diagnostic ancillary studies on such specimens would therefore be valuable.

Analysis of R132H mutant isocitrate dehydrogenase 1 (mIDH1), either by molecular methods or by immunohistochemistry (mIDH1-IHC) [4, 5, 13], has been shown to reliably distinguish diffuse astrocytomas from some of their most frequent mimickers, including pilocytic astrocytomas, gangliogliomas, or reactive gliosis [1, 3, 8, 9, 11], or likewise to distinguish oligodendroglioma from other brain tumors with clear cell morphology like neurocytomas or dysembryoplastic neuroepithelial tumors [2]. However, results from mIDH1-IHC are only diagnostically useful when positive and although prior reports have shown that about 75 % of supratentorial grade II and III diffuse gliomas are mIDH1 positive [10], no such data are available in adult infratentorial and spinal cord diffuse gliomas.

We searched our surgical pathology archives (1990–2011) for infratentorial and spinal cord diffuse gliomas, excluding glioblastomas and patients under the age of 16, and selected all cases with paraffin-embedded tissue available. All sections were reexamined and cases were reclassified according to the WHO 2007 criteria. None of the cases had histologic features of ganglioglioma. Small biopsies initially designated “low grade astrocytoma” that showed contrast enhancement, incomplete features of pilocytic astrocytoma, and no recurrence after many years were excluded since they may have represented pilocytic astrocytomas.

A total of 44 cases were selected for mIDH1-IHC (clone H09, Dianova, Hamburg, Germany), including 23 brainstem, 12 cerebellar and 9 spinal cord tumors (Table 1). The median age at diagnosis was 36 years (range 16–90) and the male to female ratio was 1.75:1. Two patients had neurofibromatosis type 1 (case B18 and C12). Surprisingly, only 3/44 tumors (7 %) were positive for the mutation, all localizing to the brainstem. None of the cerebellar or spinal cord tumors had the mutation. The median overall survival of this cohort (grade II, 43 months; grade III, 25 months) was similar to that previously reported for same grade supratentorial IDH wild-type tumors [12].

Table 1.

Study cohort listed with patient age at first diagnosis, sex, location, current diagnosis, result of mIDH1-IHC, result of IDH genotyping, overall survival, and status at last follow-up

Case Age Sex Location Diagnosis mIDH1 IHC IDH genotyping OS (months) Alive
B01 27 F BS (medulla) DA2 Negative 2 No
B02 21 F BS (medulla) DA2 Negative 145 Yes
B03 60 M BS (medulla) DA2 Negative 14 No
B04 20 F BS (pons) DA2 Negative 17 No
B05 21 M BS (medulla) DA2 Negative 90 No
B06 26 F BS (pons) DA2 Negative 60 Yes
B07 40 M BS (medulla) DA2 Positive 10 Yes
B08 64 M BS (midbrain) DA2 Negative n/a n/a
B09 16 M BS DA2 Negative n/a n/a
B10 24 M BS (medulla) DA2 Positive n/a n/a
B11 56 M BS (pons) AA3 Positive 12 No
B12 42 M BS (pons) AA3 Negative 171 No
B13 54 M BS (pons) AA3 Negative IDHwt (Seq) 13 No
B14 30 F BS (pons) AA3 Negative IDHwt (Seq) 66 No
B15 41 M BS (pons) AA3 Negative 21 No
B16 40 F BS (medulla) AA3 Negative IDHwt (Seq) 114 No
B17 19 M BS (pons) AA3 Negative 32 No
B18 24 M BS (pons) AA3 Negative 21 No
B19 26 M BS (pons) AA3 Negative 6 No
B20 26 M BS (medulla) AA3 Negative 4 Yes
B21 30 M BS AA3 Negative n/a n/a
B22 46 F BS (pons) AA3 Negative n/a n/a
B23 46 M BS (medulla) AA3 Negative n/a n/a
C01 49 F CBL DA2 Negative 80 No
C02 29 F CBL DA2 Negative 48 Yes
C03 63 M CBL DA2 Negative n/a n/a
C04 42 M CBL OA2 Negative n/a n/a
C05 90 M CBL AA3 Negative IDHwt (Seq) 2 Yes
C06 37 F CBL AA3 Negative IDHwt (Seq) 11 No
C07 31 F CBL AA3 Negative IDHwt (Seq) 57 No
C08 38 M CBL AA3 Negative IDHwt (Seq) 69 No
C09 39 M CBL AA3 Negative IDHwt (Seq) 18 No
C10 53 M CBL AA3 Negative IDH1-R132G (FMCA) 97 Yes
C11 46 M CBL AA3 Negative 12 No
C12 28 M CBL AA3 Negative n/a n/a
S01 77 F SC (T12) DA2 Negative 38 No
S02 28 F SC (C4–T4) DA2 Negative 32 Yes
S03 21 F SC (T6–T8) DA2 Negative n/a n/a
S04 45 M SC (T6–T11) O2 Negative 138 Yes
S05 33 M SC O2 Negative 43 Yes
S06 39 M SC (T12–L1) AA3 Negative 196 Yes
S07 29 F SC (T11–L2) AA3 Negative n/a Yes
S08 34 F SC (T12) AA3 Negative 72 No
S09 31 M SC (thoracic) AA3 Negative 29 No

OS overall survival, F female, M male, BS brainstem, CBL cerebellum, SC spinal cord, DA2 diffuse astrocytoma WHO grade II, AA3 anaplastic astrocytoma WHO grade III, OA2 oligoastrocytoma WHO grade II, O2 oligodendroglioma WHO grade II, wt wild-type, Seq Sequenom™, FMCA fluorescence melting curve analysis, n/a not available

The vast majority of these infratentorial and spinal cord specimens were needle or small biopsies with insufficient tissue for DNA extraction and sequencing, as is often the case in routine clinical practice. In the nine cases in which DNA extraction was achieved (six cerebellar and three brainstem tumors), mass spectrometry array mutation profiling (MassARRAY system, Sequenom, San Diego, CA) or fluorescence melting curve PCR analysis [7] confirmed the absence of R132H IDH1 mutation. Testing for other rarer IDH1 mutations or mutations in IDH2 revealed one case with an IDH1 R132G mutation.

This low rate of R312H IDH1 mutation is in sharp contrast with the high rate seen in same grade diffuse gliomas in the supratentorial compartment and suggests mIDH1-IHC may only rarely be of diagnostic help in the context of small biopsies from infratentorial and spinal cord tumors.

Acknowledgments

We wish to thank Lindsey Heathcock and Alicia Ledoux and her team for technical assistance. This work was supported in part by the Gyorkey Endowed Chair for Research and Education in Pathology.

Contributor Information

Benjamin Ellezam, Email: benjamin.ellezam@umontreal.ca, Department of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Brett J. Theeler, Department of Neuro-Oncology, University of Texas MD Anderson Cancer Center, Houston, TX, USA

Tobias Walbert, Department of Neuro-Oncology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Aaron G. Mammoser, Department of Neuro-Oncology, University of Texas MD Anderson Cancer Center, Houston, TX, USA

Craig Horbinski, Department of Pathology, University of Kentucky, Lexington, KY, USA.

Bette K. Kleinschmidt-DeMasters, University of Colorado, Denver, CO, USA

Arie Perry, University of California, San Francisco, CA, USA.

Vinay Puduvalli, Department of Neuro-Oncology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Gregory N. Fuller, Department of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX, USA

Janet M. Bruner, Department of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX, USA

Kenneth D. Aldape, Department of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX, USA

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