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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2014 Jun 4;70(Pt 7):o742. doi: 10.1107/S1600536814012070

(Z)-3-[(2-Amino­benz­yl)amino]-1-phenyl­but-2-en-1-one

Vedavalli Sairaj a, Thothadri Srinivasan b, Muthusamy Kandaswamy a, Devadasan Velmurugan b,*
PMCID: PMC4120556  PMID: 25161539

Abstract

In the title compound, C17H18N2O, the aromatic rings are almost normal to one another, making a dihedral angle of 89.00 (8)°. There is an intra­molecular N—H⋯O hydrogen bond in the mol­ecule enclosing an S(6) ring motif. In the crystal, mol­ecules are linked by N—H⋯O hydrogen bonds, forming chains along [010].

Related literature  

For the biological activity of chalcones, see: Di Carlo et al. (1999); Lin et al. (2002). For a related structure, see: Ranjith et al. (2010).graphic file with name e-70-0o742-scheme1.jpg

Experimental  

Crystal data  

  • C17H18N2O

  • M r = 266.33

  • Monoclinic, Inline graphic

  • a = 11.3197 (4) Å

  • b = 9.8341 (3) Å

  • c = 13.4207 (4) Å

  • β = 106.387 (2)°

  • V = 1433.29 (8) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 293 K

  • 0.30 × 0.25 × 0.20 mm

Data collection  

  • Bruker SMART APEXII area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2008) T min = 0.698, T max = 0.746

  • 14860 measured reflections

  • 3921 independent reflections

  • 2528 reflections with I > 2σ(I)

  • R int = 0.028

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.050

  • wR(F 2) = 0.156

  • S = 1.03

  • 3921 reflections

  • 183 parameters

  • H-atom parameters constrained

  • Δρmax = 0.23 e Å−3

  • Δρmin = −0.16 e Å−3

Data collection: APEX2 (Bruker, 2008); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814012070/su2735sup1.cif

e-70-0o742-sup1.cif (23.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814012070/su2735Isup2.hkl

e-70-0o742-Isup2.hkl (188.3KB, hkl)

Supporting information file. DOI: 10.1107/S1600536814012070/su2735Isup3.cml

CCDC reference: 1005094

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2A⋯O1 0.86 1.99 2.6619 (17) 134
N1—H1A⋯O1i 0.86 2.27 3.0009 (19) 143

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank the TBI X-ray facility, CAS in Crystallography and Biophysics, University of Madras, India for data collection. TS also thanks the DST for an Inspire Fellowship. The UGC (SAP–CAS) is acknowleged for departmental facilities.

supplementary crystallographic information

S1. Comment

Chalcones are a major class of natural products with widespread distribution in fruits, vegetables, spices, tea and soy based foodstuff and have recently been the subject of great interest for their interesting pharmacological activities (Di Carlo et al., 1999). Chalcones and flavonoids have been reported to be active anti-tuberculosis agents (Lin et al.,2002). Against this background and in order to obtain detailed information on molecular conformation in the solid state, an X-ray study of the title compound was carried out.

In the title compound, Fig. 1, the aminobenzyl ring (C1-C6) and the phenyl ring (C12-C17) are normal to one another with a dihedral angle of 89.00 (8)°. The amine N atom, N1, attached to phenyl ring (C1-C6), deviates by only -0.0020 (16) Å from the ring plane. There is an intramolecular N-H···O hydrogen bonds enclosing an S(6) ring motif.

In the crystal, molecules are linked by N–H···O hydrogen bonds forming chains along the b axis direction (Table 1 and Fig. 2).

S2. Experimental

To a warm ethanolic solution (25 ml) of 2-aminobenzylamine (0.25 g, 0.2 mmol), an ethanolic solution of benzylacetone (0.3 g, 0.2 mmol) was added dropwise and the resulting solution was refluxed for 3 h. The solution was then filtered hot and allowed to stand at room temperature. After slow evaporation of the solvent at 298 K, block-like colourless crystals of the title compound were obtained. They were filtered off, washed with cold methanol and dried [Yield 0.45 g, 83%].

S3. Refinement

Hydrogen atoms were placed in calculated positions and refined as riding atoms: N-H = 0.86 Å, C—H = 0.93- 0.97 Å, with Uiso(H) = 1.5Ueq(C-methyl) and = 1.2Ueq(N,C) for other H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 30% probability level. The intramolecular N-H···O hydrogen bond is shown as a dashed line (see Table 1 for details).

Fig. 2.

Fig. 2.

A partial view along the a axis of the crystal packing of the title compound. The hydrogen bonds are shown as dashed lines (see Table 1 for details).

Crystal data

C17H18N2O F(000) = 568
Mr = 266.33 Dx = 1.234 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 3921 reflections
a = 11.3197 (4) Å θ = 1.9–29.3°
b = 9.8341 (3) Å µ = 0.08 mm1
c = 13.4207 (4) Å T = 293 K
β = 106.387 (2)° Block, colourless
V = 1433.29 (8) Å3 0.30 × 0.25 × 0.20 mm
Z = 4

Data collection

Bruker SMART APEXII area-detector diffractometer 3921 independent reflections
Radiation source: fine-focus sealed tube 2528 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.028
ω and φ scans θmax = 29.3°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2008) h = −15→15
Tmin = 0.698, Tmax = 0.746 k = −13→13
14860 measured reflections l = −10→18

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.050 H-atom parameters constrained
wR(F2) = 0.156 w = 1/[σ2(Fo2) + (0.0715P)2 + 0.2241P] where P = (Fo2 + 2Fc2)/3
S = 1.03 (Δ/σ)max < 0.001
3921 reflections Δρmax = 0.23 e Å3
183 parameters Δρmin = −0.16 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.020 (3)

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.37143 (13) 0.36601 (14) −0.34891 (10) 0.0447 (3)
C2 0.24361 (15) 0.37189 (17) −0.38045 (13) 0.0588 (4)
H2 0.2035 0.4073 −0.4455 0.071*
C3 0.17631 (16) 0.3268 (2) −0.31782 (17) 0.0701 (5)
H3 0.0908 0.3311 −0.3407 0.084*
C4 0.23319 (19) 0.27475 (19) −0.22096 (17) 0.0724 (5)
H4 0.1867 0.2442 −0.1783 0.087*
C5 0.36069 (17) 0.26853 (18) −0.18788 (13) 0.0601 (4)
H5 0.3995 0.2335 −0.1224 0.072*
C6 0.43142 (13) 0.31337 (15) −0.25025 (10) 0.0445 (3)
C7 0.56975 (14) 0.3028 (2) −0.21832 (11) 0.0602 (4)
H7A 0.5930 0.2264 −0.2545 0.072*
H7B 0.6031 0.3844 −0.2407 0.072*
C8 0.66303 (14) 0.38414 (16) −0.03882 (11) 0.0516 (4)
C9 0.6376 (2) 0.5280 (2) −0.07480 (15) 0.0830 (6)
H9A 0.6843 0.5498 −0.1222 0.125*
H9B 0.6607 0.5880 −0.0161 0.125*
H9C 0.5513 0.5384 −0.1092 0.125*
C10 0.72605 (14) 0.35770 (15) 0.06411 (11) 0.0492 (4)
H10 0.7488 0.4313 0.1090 0.059*
C11 0.75754 (13) 0.22683 (14) 0.10462 (10) 0.0438 (3)
C12 0.83849 (12) 0.20920 (14) 0.21386 (10) 0.0414 (3)
C13 0.88339 (15) 0.08133 (17) 0.24592 (12) 0.0559 (4)
H13 0.8632 0.0086 0.1999 0.067*
C14 0.95824 (18) 0.0598 (2) 0.34596 (13) 0.0714 (5)
H14 0.9888 −0.0267 0.3663 0.086*
C15 0.98725 (17) 0.1654 (2) 0.41484 (12) 0.0709 (5)
H15 1.0376 0.1509 0.4819 0.085*
C16 0.94187 (17) 0.2926 (2) 0.38466 (12) 0.0691 (5)
H16 0.9604 0.3641 0.4318 0.083*
C17 0.86870 (15) 0.31536 (17) 0.28458 (11) 0.0568 (4)
H17 0.8395 0.4025 0.2645 0.068*
N1 0.43740 (14) 0.41274 (17) −0.41456 (10) 0.0704 (4)
H1A 0.3993 0.4452 −0.4745 0.084*
H1B 0.5165 0.4093 −0.3954 0.084*
N2 0.62611 (13) 0.28532 (14) −0.10721 (9) 0.0572 (4)
H2A 0.6362 0.2033 −0.0841 0.069*
O1 0.72160 (13) 0.12117 (11) 0.05299 (8) 0.0710 (4)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0496 (8) 0.0388 (8) 0.0424 (7) 0.0033 (6) 0.0076 (6) −0.0008 (5)
C2 0.0501 (9) 0.0528 (9) 0.0654 (9) 0.0066 (7) 0.0031 (7) −0.0081 (7)
C3 0.0493 (9) 0.0607 (11) 0.0986 (14) −0.0023 (8) 0.0179 (9) −0.0194 (10)
C4 0.0741 (12) 0.0607 (11) 0.0985 (14) −0.0168 (9) 0.0506 (11) −0.0133 (10)
C5 0.0728 (11) 0.0578 (10) 0.0551 (8) −0.0043 (8) 0.0270 (8) 0.0019 (7)
C6 0.0493 (8) 0.0446 (8) 0.0381 (6) 0.0003 (6) 0.0101 (5) 0.0000 (6)
C7 0.0511 (8) 0.0879 (13) 0.0373 (7) 0.0072 (8) 0.0052 (6) 0.0062 (7)
C8 0.0517 (8) 0.0490 (9) 0.0492 (7) 0.0033 (7) 0.0065 (6) 0.0074 (6)
C9 0.1066 (16) 0.0575 (12) 0.0705 (11) 0.0052 (11) 0.0013 (11) 0.0193 (9)
C10 0.0554 (8) 0.0400 (8) 0.0446 (7) −0.0008 (6) 0.0016 (6) 0.0002 (6)
C11 0.0445 (7) 0.0414 (8) 0.0402 (6) −0.0044 (6) 0.0032 (5) −0.0026 (5)
C12 0.0389 (7) 0.0425 (8) 0.0401 (6) −0.0038 (5) 0.0069 (5) 0.0023 (5)
C13 0.0635 (10) 0.0474 (9) 0.0527 (8) 0.0000 (7) 0.0094 (7) 0.0081 (7)
C14 0.0772 (12) 0.0672 (12) 0.0623 (10) 0.0094 (9) 0.0074 (9) 0.0260 (9)
C15 0.0655 (11) 0.0922 (14) 0.0453 (8) −0.0024 (10) 0.0001 (7) 0.0165 (9)
C16 0.0724 (11) 0.0783 (13) 0.0455 (8) −0.0077 (10) −0.0015 (8) −0.0074 (8)
C17 0.0621 (9) 0.0502 (9) 0.0482 (8) −0.0006 (7) −0.0008 (7) −0.0032 (7)
N1 0.0644 (9) 0.0951 (12) 0.0499 (7) 0.0127 (8) 0.0134 (6) 0.0302 (7)
N2 0.0638 (8) 0.0585 (8) 0.0395 (6) 0.0052 (6) −0.0012 (6) 0.0044 (5)
O1 0.0959 (9) 0.0427 (7) 0.0538 (6) −0.0044 (6) −0.0122 (6) −0.0065 (5)

Geometric parameters (Å, º)

C1—N1 1.384 (2) C9—H9C 0.9600
C1—C2 1.389 (2) C10—C11 1.403 (2)
C1—C6 1.4053 (18) C10—H10 0.9300
C2—C3 1.358 (3) C11—O1 1.2516 (16)
C2—H2 0.9300 C11—C12 1.5036 (17)
C3—C4 1.376 (3) C12—C13 1.379 (2)
C3—H3 0.9300 C12—C17 1.387 (2)
C4—C5 1.386 (3) C13—C14 1.387 (2)
C4—H4 0.9300 C13—H13 0.9300
C5—C6 1.384 (2) C14—C15 1.367 (3)
C5—H5 0.9300 C14—H14 0.9300
C6—C7 1.506 (2) C15—C16 1.369 (3)
C7—N2 1.4571 (17) C15—H15 0.9300
C7—H7A 0.9700 C16—C17 1.383 (2)
C7—H7B 0.9700 C16—H16 0.9300
C8—N2 1.3210 (19) C17—H17 0.9300
C8—C10 1.3888 (19) N1—H1A 0.8600
C8—C9 1.496 (2) N1—H1B 0.8600
C9—H9A 0.9600 N2—H2A 0.8600
C9—H9B 0.9600
N1—C1—C2 119.65 (13) H9B—C9—H9C 109.5
N1—C1—C6 121.19 (13) C8—C10—C11 124.07 (13)
C2—C1—C6 119.16 (14) C8—C10—H10 118.0
C3—C2—C1 121.04 (16) C11—C10—H10 118.0
C3—C2—H2 119.5 O1—C11—C10 122.65 (12)
C1—C2—H2 119.5 O1—C11—C12 117.23 (12)
C2—C3—C4 120.75 (16) C10—C11—C12 120.12 (12)
C2—C3—H3 119.6 C13—C12—C17 118.34 (13)
C4—C3—H3 119.6 C13—C12—C11 118.62 (13)
C3—C4—C5 119.09 (16) C17—C12—C11 123.03 (13)
C3—C4—H4 120.5 C12—C13—C14 120.79 (16)
C5—C4—H4 120.5 C12—C13—H13 119.6
C6—C5—C4 121.33 (16) C14—C13—H13 119.6
C6—C5—H5 119.3 C15—C14—C13 120.23 (17)
C4—C5—H5 119.3 C15—C14—H14 119.9
C5—C6—C1 118.63 (14) C13—C14—H14 119.9
C5—C6—C7 122.58 (13) C14—C15—C16 119.68 (15)
C1—C6—C7 118.75 (12) C14—C15—H15 120.2
N2—C7—C6 114.79 (13) C16—C15—H15 120.2
N2—C7—H7A 108.6 C15—C16—C17 120.48 (16)
C6—C7—H7A 108.6 C15—C16—H16 119.8
N2—C7—H7B 108.6 C17—C16—H16 119.8
C6—C7—H7B 108.6 C16—C17—C12 120.47 (16)
H7A—C7—H7B 107.5 C16—C17—H17 119.8
N2—C8—C10 121.76 (14) C12—C17—H17 119.8
N2—C8—C9 118.48 (13) C1—N1—H1A 120.0
C10—C8—C9 119.75 (15) C1—N1—H1B 120.0
C8—C9—H9A 109.5 H1A—N1—H1B 120.0
C8—C9—H9B 109.5 C8—N2—C7 125.86 (14)
H9A—C9—H9B 109.5 C8—N2—H2A 117.1
C8—C9—H9C 109.5 C7—N2—H2A 117.1
H9A—C9—H9C 109.5
N1—C1—C2—C3 179.97 (16) C8—C10—C11—C12 172.88 (14)
C6—C1—C2—C3 −0.5 (2) O1—C11—C12—C13 9.5 (2)
C1—C2—C3—C4 0.4 (3) C10—C11—C12—C13 −170.01 (14)
C2—C3—C4—C5 −0.2 (3) O1—C11—C12—C17 −169.53 (15)
C3—C4—C5—C6 0.0 (3) C10—C11—C12—C17 11.0 (2)
C4—C5—C6—C1 0.0 (2) C17—C12—C13—C14 −0.9 (2)
C4—C5—C6—C7 −177.47 (16) C11—C12—C13—C14 −179.89 (15)
N1—C1—C6—C5 179.81 (15) C12—C13—C14—C15 0.9 (3)
C2—C1—C6—C5 0.3 (2) C13—C14—C15—C16 0.1 (3)
N1—C1—C6—C7 −2.6 (2) C14—C15—C16—C17 −1.1 (3)
C2—C1—C6—C7 177.83 (14) C15—C16—C17—C12 1.1 (3)
C5—C6—C7—N2 −19.4 (2) C13—C12—C17—C16 −0.1 (2)
C1—C6—C7—N2 163.10 (14) C11—C12—C17—C16 178.86 (15)
N2—C8—C10—C11 0.8 (3) C10—C8—N2—C7 −174.01 (15)
C9—C8—C10—C11 −178.05 (17) C9—C8—N2—C7 4.9 (3)
C8—C10—C11—O1 −6.6 (3) C6—C7—N2—C8 −90.1 (2)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N2—H2A···O1 0.86 1.99 2.6619 (17) 134
N1—H1A···O1i 0.86 2.27 3.0009 (19) 143

Symmetry code: (i) −x+1, y+1/2, −z−1/2.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: SU2735).

References

  1. Bruker (2008). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Di Carlo, G., Mascolo, N., Izzo, A. A. & Capasso, F. (1999). Life Sci 65, 337–353. [DOI] [PubMed]
  3. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  4. Lin, Y. M., Zhou, Y., Flavin, M. T., Zhou, L. M., Nie, W. & Chen, F. C. (2002). Bioorg. Med. Chem. 10, 2795–2802. [DOI] [PubMed]
  5. Ranjith, S., Thirunarayanan, A., Raja, S., Rajakumar, P. & SubbiahPandi, A. (2010). Acta Cryst. E66, o2261–o2262. [DOI] [PMC free article] [PubMed]
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814012070/su2735sup1.cif

e-70-0o742-sup1.cif (23.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814012070/su2735Isup2.hkl

e-70-0o742-Isup2.hkl (188.3KB, hkl)

Supporting information file. DOI: 10.1107/S1600536814012070/su2735Isup3.cml

CCDC reference: 1005094

Additional supporting information: crystallographic information; 3D view; checkCIF report


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