Abstract
In the cation of the title molecular salt, C6H16NO+·Cl−, the N—C—C—O torsion angle is 176.5 (2)°. In the crystal, the cations and chloride ions are linked by N—H⋯O and O—H⋯O hydrogen bonds, generating a two-dimensional network parallel to (100).
Related literature
For the chiral pool synthesis of naturally occurring molecules, see: Coppola & Schuster (1987 ▶); Bergmeier & Stanchina (1999 ▶). For pharmacologic synthesis, see: Gante (1994 ▶); Tok & Rando (1998 ▶).
Experimental
Crystal data
C6H16NO+·Cl−
M r = 153.65
Monoclinic,
a = 8.5204 (3) Å
b = 7.8742 (3) Å
c = 14.1844 (5) Å
β = 105.804 (1)°
V = 915.68 (6) Å3
Z = 4
Mo Kα radiation
μ = 0.35 mm−1
T = 298 K
0.40 × 0.10 × 0.03 mm
Data collection
Bruker APEXII CCD area-detector diffractometer
5487 measured reflections
1668 independent reflections
1071 reflections with I > 2σ(I)
R int = 0.058
Refinement
R[F 2 > 2σ(F 2)] = 0.046
wR(F 2) = 0.124
S = 1.00
1668 reflections
94 parameters
3 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.48 e Å−3
Δρmin = −0.25 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814012847/gw2144sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814012847/gw2144Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814012847/gw2144Isup3.cml
CCDC reference: 1006385
Additional supporting information: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1—H1⋯Cl1i | 0.86 (1) | 2.29 (1) | 3.140 (2) | 167 (3) |
| N3—H3A⋯Cl1 | 0.90 (1) | 2.27 (1) | 3.144 (2) | 166 (2) |
| N3—H3B⋯Cl1ii | 0.89 (1) | 2.30 (1) | 3.190 (2) | 175 (2) |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
CVC would like to thank CONACYT for a postdoctoral scholarship (290805–UNAM). Support of this research by CONACYT (CB2010–154732) and PAPIIT (IN201711–3 and IN213214–3) is gratefully acknowledged.
supplementary crystallographic information
S1. Comment
Amino alcohols are some of the most versatile starting materials both at the laboratory and at the industrial scale and have been widely used for a large number of applications. Among which stands the chiral pool synthesis of naturally occurring molecules (Coppola et al. 1987; Bergmeier et al. 1999). These compounds have also displayed important biological activities and are of interest for the development of synthetic methods in the pharmaceutical industry (Gante, 1994; Tok et al. 1998). Based on the above, we report here the crystal structure of N-((2-hydroxyethyl)tertbutyl)ammonium chloride and discuss its geometry and intermolecular interactions.
The molecular structure of the title compound [(HOC2H4)((CH3)3C)NH2]Cl- (Fig. 1), consists of an ionic species, exhibiting the nitrogen atom in a tetrahedral geometry. The dihedral angle between the tertbutyl and the 2-hydroxyethyl moieties is almost plane (173.34 (2)°) as a result of the reduced steric effects. In the asymmetric unit the Cl atom is linked by a N3—H3A···Cl1 interaction (2.266 (11) Å). In the crystal the Cl atom is acting as tri-acceptor H-bonding, such that, the anion and cation species are linked through O1—H1···Cl1 with distances of 2.294 (13) Å, leading to stairs aligned along the ac plane (symmetry code x, -y + 3/2, z + 1/2). These stairs are expanded by a third intermolecular interaction N3—H3B···Cl1 (2.304 (10) Å) along the b axis with symmetry code -x + 1,y - 1/2,-z + 3/2 (see Table 1, Fig. 2).
S2. Experimental
The title compound was isolated from the reaction of [S2CN(tBu)(EtOH)] and [NiCl2(PPh3)2] in a 1:1 molar ratio in ethanol. Colourless crystals suitable for single-crystal X-ray diffraction analysis were obtained from a solvent system ether/CH2Cl2.
S3. Refinement
The atoms H1, H3A and H3B were located from a difference Fourier map and N3—H3A, N3—H3B and O1—H1 distances are restrained to 0.90 and 0.85 Å respectively. H atoms were included in calculated position (C—H = 0.97 Å for methylene H, and C—H = 0.96 Å for methyl H), and refined using a riding model with Uiso(H) = 1.2 Ueq of the carrier atoms. 3 badly fitting reflections were omitted from the final refinement.
Figures
Fig. 1.
The molecular structure of the title compound showing the atom labelling and displacement ellipsoids at the 40% of probability.
Fig. 2.
A view in projection on the direction of the chain. The O—H···Cl and N—H···Cl interactions are shown as dashed lines.
Crystal data
| C6H16NO+·Cl− | F(000) = 336 |
| Mr = 153.65 | Dx = 1.115 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 2475 reflections |
| a = 8.5204 (3) Å | θ = 2.5–25.3° |
| b = 7.8742 (3) Å | µ = 0.35 mm−1 |
| c = 14.1844 (5) Å | T = 298 K |
| β = 105.804 (1)° | Prism, colourless |
| V = 915.68 (6) Å3 | 0.40 × 0.10 × 0.03 mm |
| Z = 4 |
Data collection
| Bruker APEXII CCD area-detector diffractometer | Rint = 0.058 |
| Detector resolution: 0.83 pixels mm-1 | θmax = 25.3°, θmin = 2.5° |
| ω scans | h = −5→10 |
| 5487 measured reflections | k = −8→9 |
| 1668 independent reflections | l = −17→16 |
| 1071 reflections with I > 2σ(I) |
Refinement
| Refinement on F2 | 3 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.046 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.124 | w = 1/[σ2(Fo2) + (0.0584P)2] where P = (Fo2 + 2Fc2)/3 |
| S = 1.00 | (Δ/σ)max = 0.001 |
| 1668 reflections | Δρmax = 0.48 e Å−3 |
| 94 parameters | Δρmin = −0.25 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Cl1 | 0.44289 (9) | 0.82425 (9) | 0.62991 (4) | 0.0579 (3) | |
| O1 | 0.2643 (2) | 0.8483 (3) | 0.92991 (15) | 0.0690 (6) | |
| H1 | 0.303 (4) | 0.811 (4) | 0.9889 (11) | 0.083* | |
| C1 | 0.3512 (3) | 0.7606 (4) | 0.87548 (19) | 0.0531 (7) | |
| H1A | 0.3003 | 0.7781 | 0.8062 | 0.064* | |
| H1B | 0.3488 | 0.6400 | 0.8889 | 0.064* | |
| C2 | 0.5253 (3) | 0.8207 (3) | 0.90041 (18) | 0.0436 (6) | |
| H2A | 0.5280 | 0.9397 | 0.8832 | 0.052* | |
| H2B | 0.5742 | 0.8098 | 0.9704 | 0.052* | |
| N3 | 0.6212 (2) | 0.7191 (3) | 0.84643 (15) | 0.0383 (5) | |
| H3A | 0.579 (3) | 0.734 (3) | 0.7818 (8) | 0.046* | |
| H3B | 0.607 (3) | 0.6079 (13) | 0.8511 (17) | 0.046* | |
| C4 | 0.8038 (3) | 0.7496 (3) | 0.87151 (19) | 0.0454 (7) | |
| C5 | 0.8775 (3) | 0.7126 (4) | 0.9796 (2) | 0.0686 (9) | |
| H5A | 0.8423 | 0.6028 | 0.9950 | 0.082* | |
| H5B | 0.8427 | 0.7976 | 1.0181 | 0.082* | |
| H5C | 0.9944 | 0.7142 | 0.9941 | 0.082* | |
| C6 | 0.8687 (3) | 0.6245 (4) | 0.8087 (2) | 0.0728 (9) | |
| H6A | 0.8452 | 0.5105 | 0.8247 | 0.087* | |
| H6B | 0.9845 | 0.6386 | 0.8214 | 0.087* | |
| H6C | 0.8172 | 0.6459 | 0.7407 | 0.087* | |
| C7 | 0.8344 (3) | 0.9303 (4) | 0.8456 (2) | 0.0678 (9) | |
| H7A | 0.9497 | 0.9489 | 0.8584 | 0.081* | |
| H7B | 0.7906 | 1.0071 | 0.8844 | 0.081* | |
| H7C | 0.7825 | 0.9498 | 0.7774 | 0.081* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cl1 | 0.0865 (6) | 0.0441 (4) | 0.0413 (4) | 0.0031 (3) | 0.0142 (4) | −0.0011 (3) |
| O1 | 0.0533 (13) | 0.0912 (16) | 0.0646 (13) | 0.0179 (11) | 0.0194 (11) | 0.0001 (13) |
| C1 | 0.0387 (17) | 0.0772 (19) | 0.0429 (15) | 0.0068 (14) | 0.0103 (12) | −0.0066 (15) |
| C2 | 0.0407 (16) | 0.0462 (15) | 0.0467 (14) | 0.0013 (11) | 0.0166 (12) | −0.0050 (13) |
| N3 | 0.0377 (13) | 0.0364 (11) | 0.0406 (11) | 0.0007 (9) | 0.0101 (10) | −0.0003 (11) |
| C4 | 0.0342 (15) | 0.0438 (14) | 0.0584 (17) | 0.0013 (11) | 0.0130 (13) | −0.0028 (14) |
| C5 | 0.0472 (19) | 0.084 (2) | 0.0657 (19) | 0.0039 (15) | −0.0004 (15) | 0.0017 (18) |
| C6 | 0.0513 (19) | 0.079 (2) | 0.095 (2) | 0.0051 (16) | 0.0311 (17) | −0.020 (2) |
| C7 | 0.0463 (18) | 0.0607 (19) | 0.099 (2) | −0.0077 (14) | 0.0232 (17) | 0.0038 (19) |
Geometric parameters (Å, º)
| O1—C1 | 1.390 (3) | C4—C5 | 1.519 (4) |
| O1—H1 | 0.862 (10) | C4—C6 | 1.529 (4) |
| C1—C2 | 1.504 (4) | C5—H5A | 0.9600 |
| C1—H1A | 0.9700 | C5—H5B | 0.9600 |
| C1—H1B | 0.9700 | C5—H5C | 0.9600 |
| C2—N3 | 1.495 (3) | C6—H6A | 0.9600 |
| C2—H2A | 0.9700 | C6—H6B | 0.9600 |
| C2—H2B | 0.9700 | C6—H6C | 0.9600 |
| N3—C4 | 1.518 (3) | C7—H7A | 0.9600 |
| N3—H3A | 0.896 (9) | C7—H7B | 0.9600 |
| N3—H3B | 0.888 (10) | C7—H7C | 0.9600 |
| C4—C7 | 1.510 (4) | ||
| C1—O1—H1 | 104 (2) | C7—C4—C6 | 110.5 (2) |
| O1—C1—C2 | 110.7 (2) | N3—C4—C6 | 105.8 (2) |
| O1—C1—H1A | 109.5 | C5—C4—C6 | 110.4 (2) |
| C2—C1—H1A | 109.5 | C4—C5—H5A | 109.5 |
| O1—C1—H1B | 109.5 | C4—C5—H5B | 109.5 |
| C2—C1—H1B | 109.5 | H5A—C5—H5B | 109.5 |
| H1A—C1—H1B | 108.1 | C4—C5—H5C | 109.5 |
| N3—C2—C1 | 110.6 (2) | H5A—C5—H5C | 109.5 |
| N3—C2—H2A | 109.5 | H5B—C5—H5C | 109.5 |
| C1—C2—H2A | 109.5 | C4—C6—H6A | 109.5 |
| N3—C2—H2B | 109.5 | C4—C6—H6B | 109.5 |
| C1—C2—H2B | 109.5 | H6A—C6—H6B | 109.5 |
| H2A—C2—H2B | 108.1 | C4—C6—H6C | 109.5 |
| C2—N3—C4 | 117.61 (19) | H6A—C6—H6C | 109.5 |
| C2—N3—H3A | 109.4 (16) | H6B—C6—H6C | 109.5 |
| C4—N3—H3A | 108.7 (16) | C4—C7—H7A | 109.5 |
| C2—N3—H3B | 112.9 (15) | C4—C7—H7B | 109.5 |
| C4—N3—H3B | 106.6 (15) | H7A—C7—H7B | 109.5 |
| H3A—N3—H3B | 100 (2) | C4—C7—H7C | 109.5 |
| C7—C4—N3 | 109.1 (2) | H7A—C7—H7C | 109.5 |
| C7—C4—C5 | 112.0 (2) | H7B—C7—H7C | 109.5 |
| N3—C4—C5 | 108.8 (2) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1···Cl1i | 0.86 (1) | 2.29 (1) | 3.140 (2) | 167 (3) |
| N3—H3A···Cl1 | 0.90 (1) | 2.27 (1) | 3.144 (2) | 166 (2) |
| N3—H3B···Cl1ii | 0.89 (1) | 2.30 (1) | 3.190 (2) | 175 (2) |
Symmetry codes: (i) x, −y+3/2, z+1/2; (ii) −x+1, y−1/2, −z+3/2.
Footnotes
Supporting information for this paper is available from the IUCr electronic archives (Reference: GW2144).
References
- Bergmeier, S. C. & Stanchina, D. M. (1999). J. Org. Chem. 64, 2852–2859. [DOI] [PubMed]
- Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Coppola, G. M. & Schuster, H. F. (1987). In Asymmetric Synthesis Construction of Chiral Molecules Using Amino Acids New York: Wiley.
- Gante, J. (1994). Angew. Chem. Int. Ed. Engl. 33, 1699–1720.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Tok, J. B.-H. & Rando, R. R. (1998). J. Am. Chem. Soc. 120, 8279–8280.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814012847/gw2144sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814012847/gw2144Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814012847/gw2144Isup3.cml
CCDC reference: 1006385
Additional supporting information: crystallographic information; 3D view; checkCIF report


