Abstract
Gene transfer into primary human CD4 T lymphocytes is a critical tool in studying the mechanism of T cell-dependent immune responses and human immunodeficiency virus-1 (HIV-1) infection. Nucleofection® is an electroporation technique that allows efficient gene transfer into primary human CD4 T cells that are notoriously resistant to traditional electroporation. Despite its popularity in immunological research, careful characterization of its impact on the physiology of CD4 T cells has not been documented. Herein, using freshly-isolated primary human CD4 T cells, we examine the effects of Nucleofection® on CD4 T cell morphology, intracellular calcium levels, cell surface activation markers, and transcriptional activity. We find that immediately after Nucleofection®, CD4 T cells undergo dramatic morphological changes characterized by wrinkled and dilated plasma membranes before recovering 1 hour later. The intracellular calcium level also increases after Nucleofection®, peaking after 1 hour before recovering 8 hours post transfection. Moreover, Nucleofection® leads to increased expression of T cell activation markers, CD154 and CD69, for more than 24 hours, and enhances the activation effects of phytohemagglutinin (PHA) stimulation. In addition, transcriptional activity is increased in the first 24 hours after Nucleofection®, even in the absence of exogenous stimuli. Therefore, Nucleofection® significantly alters the activation state of primary human CD4 T cells. The effect of transferred gene products on CD4 T cell function by Nucleofection® should be assessed after sufficient resting time post transfection or analyzed in light of the activation caveats mentioned above.
Keywords: Nucleofection®, gene transfer, T cell activation, calcium, HIV-1, plasmid
1. Introduction
Efficient gene transfer into living cells is a key step in studying gene function and gene therapy. Introduction of exogenous DNA or RNA species into cells is accomplished generally through either viral vectors or chemical/physical methods. While advances in genetically engineered viral vectors have allowed efficient gene transfer with minimal cell damage, these viral approaches are expensive, time consuming, and unable to deliver large DNA fragments that exceed virus packing capacity. Potential contamination of wild-type viruses also limits its use in gene delivery to humans during gene therapy. In comparison, physical approaches, especially electroporation, although accompanied by ing more cell death, offer much easier, faster, and safer ways of gene transfer.
Electroporation works by creating a transient and reversible permeable structure on the cell membrane by applying short and high-voltage pulses to generate an external electric field that surpasses the capacitance of the cell membrane (Rols, 2006). Experimental studies and computer simulations suggest that the electric field leads to disorganization of lipid molecules, entry of water molecules into the lipid bilayer structure, and eventually the formation of pores (Rols, 2006; Tieleman, 2006). The large water permeable pores allow delivery into the cells of not only DNA or RNA molecules, but also small ions, dyes, drugs, and antibodies or other proteins. On the other hand, the disruption of cell integrity caused by the loss of transmembrane potential and leakage of cell contents may lead to cell death.
Gene transfer into primary human CD4 T cells is critical for studying gene functions of the human immune system, mechanisms of human immunodeficiency virus-1 (HIV-1) infection, and endowing cells with new functional attributes for immunotherapy. Unmanipulated resting primary human CD4 T cells are notoriously resistant to transfection with conventional electroporation techniques. However, it was found that CD4 T cells stimulated with sub-optimal doses of phytohemagglutinin (PHA) or concanvalin A (ConA) could be transiently transfected if electroporation was done within a narrow window of time post stimulation (Chrivia et al., 1990; Schubert et al., 1995; Hughes and Pober, 1996; Cron et al., 1997). The transfection efficiency, however, was low (<5%), and although T cell proliferation and IL-2 production were not found after sub-optimal stimulation (Chrivia et al., 1990; Hughes and Pober, 1996), undetected changes in cell cycle status and activation-related gene transcription may undermine the value of these cells in studying the function of naïve T cells.
A more recent advance in gene transfer is an electroporation-based Nucleofection® technique by Lonza (Basel, Switzerland; previously, Amaxa Biosystems). Aided by the unique electrical parameters and buffer solutions customized for each specific cell type, the technique is able to deliver genes of interest directly into the nuclei of non-dividing cells, therefore achieving a very high level of transfection efficiency. It has been widely used to transfer DNA or RNA into dozens of primary cell types of different species, including human primary CD4 T cells. More than 100 research papers have been published using Nucleofection® for gene transfer into primary human T cells (Tahvanainen et al., 2006; Magg et al., 2009; Torgerson et al., 2009) on a range of topics, including T cell activation (Finney et al., 2004; Zhao et al., 2005; Stallwood et al., 2006), signal transduction (Kovacs et al., 2005; Methi et al., 2005; Wabnitz et al., 2006), transcriptional regulation (Grant et al., 2006; Mantel et al., 2006; Mehta et al., 2010), and HIV-1 infection (Chiu et al., 2005; Trushin et al., 2005; Selliah et al., 2008). More recently, this technology has been popularized for selectively knocking down, or silencing, gene expression in primary human CD4 T cells (Zhang et al., 2012; Freeley and Long, 2013). Thus, Nucleofection® has fast become a powerful research tool for scientists studying primary human CD4 T cell physiology.
Despite the popularity of this technique, there has not been a comprehensive study on the effect of the Nucleofection® procedure on the physiology and activation status of primary human CD4 T cells. How Nucleofection® may affect CD4 T cell activation status has important implications in interpreting data from experiments designed to address issues innate to resting primary human CD4 T cells, as opposed to pre-activated CD4 T cells or transformed cell lines. Herein, we examine the changes of primary CD4 T cell activation status by monitoring morphology, intracellular calcium flux, and cell surface activation markers. We also test the impact of Nucleofection® on T cell function by measuring CD4 T cell transcriptional responses with and without stimulation.
2. Materials and Methods
2.1 Plasmids, reagents, and antibodies
Enhanced green fluorescent protein (EGFP) expressing reporter plasmids, pEGFP-N1, pCMS-EGFP, and pIRES2-EGFP, were purchased from Clontech (Mountain View, CA). The empty control expression vector, pRc/CMV, is from Invitrogen (Carlsbad, CA). Luciferase reporter plasmids for NFAT-, NFκB-, and HIV-1 LTR-driven transcriptional activities were described previously (Petrak et al., 1994; Dolganov et al., 1996). Anti-CD25-PE (R-phycoerythrin; catalogue #341009, clone 2A3), anti-CD154-PE (catalogue #555700, clone TRAP1), and anti-HLA-DR-FITC (fluoroscein isothiocyanate; catalogue #555811, clone G46-6) antibodies were purchased from Becton Dickinson Pharmingen (San Jose, CA). Anti-CD69-PE (catalogue #MHCD6904, clone CH/4) was purchased from Caltag (Burlingame, CA). PHA, phorbol myristate acetate (PMA), and the calcium ionophore, ionomycin, were purchased from Sigma (St. Louis, MO). RPMI 1640 (Sigma-Aldrich, St. Louis, MO; catalogue #R8758) was supplemented with 10% fetal calf serum (Gibco/Life Technologies, Grand Island, NY; catalogue #16000036), 100 units/ml penicillin, 100 μg/ml streptomycin, 0.29 mg/ml L-glutamine, non-essential amino acids, 1 mM sodium pyruvate, and 55 μm 2-mercaptoethanol. Antibody-coated beads were made by linking anti-CD28 antibody, 9.3, and anti-CD3 antibody, OKT3, (Ortho Biotech, Bridgewater, NJ) to tosylactivated Dynabeads M-450 (Dynal Biotech, Oslo, Norway).
2.2 Isolation and culture of primary human CD4 T Cells
Adult human CD4 T cells were isolated from peripheral blood of healthy donors by negative selection using a proprietary antibody mix (StemCell Technologies, Vancouver, BC) and red blood cell rosetting as previously described (Cron, 2003). More than 98% of purified cells were CD4-expressing T cells by flow cytometry (see below). CD4 T cells were cultured in complete RPMI1640 medium in the presence of 10 units/ml rhIL-2 R&D Systems, Minneapolis, MN; catalogue #202-IL). Institutional Review Board approval was obtained for these studies.
2.3 Nucleofection®
5x106 primary human CD4 T cells were resuspended in 100 μl of Nucleofection® buffer solution for human primary T cells (Human T cell kit, Lonza) containing plasmid DNA, and the cells were transfected using Program U-014 of the Nucleofector II. Immediately after Nucleofection®, cells were transferred into 500 μl of pre-warmed media.
2.4 Reporter gene activity assay
After resting for varying periods of time, the transfected CD4 T cells were either not stimulated or stimulated with ionomycin (1.5 μM), or PMA (25 ng/ml) and ionomycin, for 6 hours at 37°C. Cells were lysed with Passive Lysis Buffer (Promega, Madison, WI), and firefly luciferase reporter gene activity was determined using a Dual Luciferase Assay Kit (Promega) on a Lumat LB 9507 luminometer (EE and G Berthold, Bad Wildbad, Germany) as previously detailed (Behre et al., 1999; Zhang et al., 2004). The assay was done in duplicate and corrected for transfection efficiency based on co-transfected Renilla luciferase activity as previously described (Cron et al., 2006). For Figure 5, the 2 hour value with no stimulation was assigned as the reference luciferase activity (100%), and the other conditions were calculated according to the formula: (test value/2 hour no stimulation value) x 100%.
2.5 Microscopy and flow cytometry
For intracellular calcium imaging, 5x106 CD4 T cells were washed twice with Dulbecco’s PBS buffer (Gibco/Life Technologies, catalogue #14190-250) and pulsed with 5 μM Fura-2-AM (Invitrogen, Carlsbad, CA) for 30 minutes at room temperature before Nucleofection®. To determine intracellular calcium levels by ratio imaging, 510 nm emissions excited by 380 nm and 340 nm wave lengths were captured using time-lapse imaging with 63x water objectives on a Zeiss Axioplan2 Microscope (Jena, Germany) at 25°C. Data were collected and analyzed with SlideBook software (Intelligent Imaging Innovations, Denver, CO). For flow cytometry, cells were washed twice and blocked in staining buffer (PBS containing 1% BSA and 0.02% sodium azide) for 30 minutes at room temperature, and stained with fluorescently conjugated antibodies for 30 minutes on ice. Stained cells were analyzed using a FACScalibur flow cytometer (Becton Dickinson) and CellQuest (Becton Dickinson) or FlowJo (Ashland, OR) software.
3. Results and Conclusions
3.1 Effective gene transfer into primary human CD4 T cells by Nucleofection®
Freshly isolated resting primary human CD4 T cells underwent Nucleofection® (using the Human T cell kit and the U-014 program setting recommended by the manufacturer) with 3 different EGFP expression vectors [all driven by the immediate-early cytomegalovirus (CMV) promoter] at varying doses. As shown in Fig. 1A, after 24 hours, all three vectors led to GFP expression in transfected cells in a dose-dependent manner. pEGFP-N1 gave the highest detectable transfection rate, with 75% of FCM-gated live cells expressing EGFP after transfection with 1 μg of vector/106 cells. In comparison, cells transfected with pCMS-EGFP or pIRES2-EGFP had approximately five-fold lower detectable transfection rates, possibly due to transcriptional promoter positioning (pCMS-EGFP) or transcript editing (pIRES2-EGFP) in these vectors. While increased amounts of vectors helped improve detectable transfection rates, it also caused substantially more cell death (Fig. 1B). Less than 20% of the cells transfected with 1 μg of vector/106 cells survived the Nucleofection® after 24 hours. The strong impact of the Nucleofection® procedure on cell survival prompted us to investigate how other aspects of T cell physiology, especially T cell activation status, might also be affected.
3.2 CD4 T cell morphological changes induced by Nucleofection®
Immediately after Nucleofection® (U-014) with an empty expression vector control, pRc/CMV, CD4 T cells displayed pronounced morphological changes as observed using Nomarski differential interference contrast (DIC) microcopy (Fig. 2A,a). Similar morphologic changes were obtained using alternative manufacture recommend CD4 T cell programs (data not shown). The majority of the CD4 T cells had dramatic expansions of plasma membrane, leading to marked increases in cell size. Since the size of the nucleus appeared to remain unchanged, the expansion of the plasma membrane suggests a volume increase of the previously almost invisible cytoplasm and dilution of its contents by an influx of media through pores in the plasma membrane. The nucleus appeared much rougher in texture than prior to transfection, although it is not certain whether this reflects real structural changes or the appearance was caused by altered optical characteristics of expanded plasma membrane. These changes gradually recovered over time. After an hour, the majority of the cells appeared identical to non-transfected CD4 T cells. Although it is unclear whether and how these early morphological changes might directly influence later T cell activation status and function, such significant alterations of cell morphology by Nucleofection® suggest the process may dramatically impact T cell physiology.
3.3 Sustained elevation of CD4 T cell intracellular calcium levels by Nucleofection®
The Ca2+ concentration in the extracellular environment in vivo or in culture medium (~1 mM) is much higher than that inside of T cells (< 1 μM). The ability of Nucleofection® to permeabilize cell membranes to the extent that it allows the entrance of large DNA molecules suggests that it should also permit the passage of small calcium ions. Indeed, a homogeneous increase of intracellular Ca2+ was seen immediately after transfection in the presence (Fig. 2A,b and 2B) or absence of plasmid DNA (data not shown). Interestingly, only limited elevation was seen initially, but the Ca2+ level continued to increase over time and peaked at 60 minutes post Nucleofection®, before gradually declining to normal levels after 8 hours. The peak Ca2+ level was similar to that induced by stimulation with anti-CD3 and anti-CD28 coated beads (Fig. 2A,c and 2C). According to the manufacturer, the transfection buffer does not contain Ca2+. Therefore, the increase was likely a result of gradual Ca2+ influx from the medium. From the kinetics of the Ca2+ level change, it can be speculated that Nucleofection® caused large pores permeable for large DNA molecules very transiently. The large pores were likely closed before the cells were transferred to media containing Ca2+, therefore an immediate high level increase of intracellular Ca2+ was not observed right after the cells were transferred into medium. However, small defects on the membrane may have remained allowing Ca2+ to gradually leak into the cells. During the first hour, this likely could not be balanced by calcium pumps (Ca2+-ATPases) on the membrane that drive Ca2+ out of the cell. Perhaps, Nucleofection® led to compromised calcium pump function, thus resulting in continued increases of intracellular Ca2+ levels. After one hour, with decreasing Ca2+ leakage and/or increasing calcium pump function, intracellular Ca2+ was gradually cleared. Although the direct connection is unknown, it is interesting to note that the time it took for cell morphology to recover and for effective Ca2+ clearance to start were both one hour.
Elevation of intracellular calcium level is an important step in the T cell activation process (Quintana et al., 2005). Signals from the T cell receptor generate inositol-1,4,5-triphosphate (IP3) that induces release of calcium from the endoplasmic reticulum (ER). Depletion of calcium from the ER triggers calcium influx from the extracellular environment through the calcium regulated activation channel (CRAC) (Hogan et al., 2010). Through the phosphatase, calcineurin, the resultant elevation of intracellular calcium level enables the activation and translocation of nuclear factor of activated T cells (NFAT) into the nucleus (Crabtree and Olson, 2002). Ca2+ can also activate nuclear factor kappa B (NF-κB) in a protein kinase C (PKC)-dependent manner (Li and Verma, 2002), and through Ca2+ -dependent kinases, modulate the activity of AP-1 transcription factors (Rao et al., 1997). NFAT, NF-κB, and activation protein-1 (AP-1) are three critical transcription factors in T cells, controlling the transcription of new genes necessary for T cell activation, proliferation, and function. In fact, 75% of all activation-regulated genes show a dependence on Ca2+ influx through the plasma membrane via CRAC channels (Feske et al., 2001). Therefore, when designing experiments aimed at studying the function of primary T cells, the possible impact of sustained elevation of intracellular Ca2+ levels caused by Nucleofection® on T cell activation status should be taken into consideration.
3.4 Changes in CD4 T cell surface activation markers after Nucleofection®
Although Nucleofection® (U-014) did not lead to CD4 T cell proliferation or cytokine production (data not shown), changes in the expression of classical CD4 T cell surface activation markers were observed. Increased expression of CD69 and CD154 was seen on CD4 T cells 24 hours post transfection, although the expression of CD25 and HLA-DR remained largely unchanged (Fig. 3). Following surface marker expression over time revealed that increased expression of CD69 and CD154 started as early as 2 hours and peaked at around 6 hours before declining gradually (Fig. 4). After 48 hours, while CD4 T cells stopped expressing CD154, there were still 25% of CD4 T cells expressing CD69. Similar results in cell surface activation markers were obtained with alternative Nucleofection® protocols (data not shown). It is likely that the expression of CD69 and CD154 are directly linked to the elevated intracellular Ca2+ levels (Jullien et al., 2003), and such sustained expression of surface activation markers suggests altered CD4 T cell activation status.
3.5 Impact of Nucleofection® on subsequent CD4 T cell activation
Despite the sustained elevation of Ca2+ following Nucleofection®, once recovered, CD4 T cells fluxed calcium similarly to non-transfected cells in response to stimulation by beads coated with anti-CD3 and anti-CD28 antibodies (Fig. 2C). This suggests membrane calcium pumps and CRAC channels controlling calcium influx resumed their normal function. To look at surface activation marker expression, CD4 T cells were stimulated with PHA or PMA plus ionomycin two hours post transfection and the cell surface activation markers were monitored at different time points. As shown in Fig. 4A, increased CD25 expression induced by PHA or PMA plus ionomycin was minimally affected by Nucleofection®. PHA induced similar levels of CD25 expression on transfected and non-transfected control cells. CD25 expression was somewhat subdued in transfected CD4 T cells in response to PMA plus ionomycin. This is not unexpected as Nucleofection® itself did not alter CD25 expression. However, for CD69, whose expression was significantly increased by the Nucleofection® procedure, further stimulation with PHA led to sustained expression in over 60% of the CD4 T cells for more than 48 hours (Fig. 4B). PHA did not further increase the expression of CD154 induced by Nucleofection® (Fig. 4C). The expression of CD69 and CD154 induced by PMA and ionomycin was both somewhat subdued in transfected CD4 T cells. Therefore, Nucleofection® appears to enhance the expression of CD69 induced by PHA but subdue the expression of CD25, CD69, and CD154 induced by PMA and ionomycin.
Reporter genes driven by particular transcriptional promoters are frequently introduced into T cells for testing transfection factor activity or identifying activators or inhibitors of transcriptional regulation. To test how suitable Nucleofection® is for introducing reporter genes into primary human CD4 T cells, CD4 T cells were transfected with luciferase genes driven by NFAT- or NFκB-responsive reporter plasmids. After resting for different time periods, transfected CD4 T cells were either not stimulated or stimulated with ionomycin, or PMA and ionomycin, for 6 hours prior to luciferase activity measurement. As shown in Fig. 5, reporter genes measuring NFAT and NFκB activity were notably elevated without additional stimulation within 12 hours of transfection compared to background luciferase control values (routinely <1,000 arbitrary light units). This transcriptional activity was only minimally augmented by the addition of ionomycin alone (Fig. 5). These results likely reflect the fact that Nucleofection® alone results in substantial intracellular calcium levels (Fig. 2A,b) and thus resembles calcium ionophore (ionomycin) treatment. By contrast, substantially higher activities were induced by PMA and ionomycin (P+I) within 12 hours of transfection likely reflecting PMA stimulation of PKC and other kinases. The diminished reporter gene activities at later time points were likely due in part to increased cell death, but other factors are likely at play since there was only a modest decrease in the co-transfected Renilla luciferase tranfection efficiency control plasmids at these later time points.
Similar to the NFAT and NFκB reporter constructs, the HIV-1 LTR-driven reporter gene construct was active within 12 hours of transfection and was only minimally augmented by ionomycin (Fig. 5). These results contrast with prior reports where ionomycin stimulation alone more than doubled HIV-1 LTR transcriptional activity (Cron et al., 2000) when using a more traditional transient transfection protocol (Cron et al., 1997). Nevertheless, addition of PMA notably increased HIV-1 transcription above that of ionomycin alone, particularly at 2 and 4 hours post Nucleofection® (Fig. 5). Because of the importance of studying HIV-1 regulation in primary human CD4 T cells, one must be aware of the calcium flux induced by Nucleofection® when interpreting results such as these.
In summary, Nucleofection® is a highly effective method for delivering DNA constructs into primary human CD4 T cells that are moderately resistant to other means of gene transfer. A relatively small amount of DNA was sufficient for transfecting a large number of CD4 T cells and lead to the expression of the gene of interest in up to 75% of the cell population with an acceptable level of cell death. On the other hand, Nucleofection® caused significant changes in T cell morphology, pronounced elevation of intracellular calcium levels, and sustained increases of certain activation markers on the cell surface of CD4 T cells. Nucleofection® also affected subsequent activation of CD4 T cells, especially in terms of CD69 expression, and transcriptional activity. Therefore, to minimize the impact of the Nucleofection® procedure on CD4 T cell physiology, appropriate resting time post transfection should be considered for CD4 T cells to recover from the changes caused by the procedure and for artificially induced CD4 T cell activities to subside. Unless the significance of these changes in the activation status and the functions of CD4 T cells are clear, care should be taken when interpreting data from cells following Nucleofection®, as they may not represent truly resting primary human CD4 T cells.
Highlights.
Nucleofection® of primary human CD4 T cells results in sustained intracellular calcium levels for up to 8 hours post transfection.
Nucleofection® of primary human CD4 T cells leads to cell surface expression of T cell activation markers for up to 24 hours post transfection.
Nucleofection® of primary human CD4 T cells results in T cell transcriptional activity for at least 24 hours post transfection.
Acknowledgments
This work was supported by NIH grants, R01-AR-48257, R21-AR-49335, and R21-AI-68574 (all to RQC).
Abbreviations
- AP-1
activation protein 1
- ConA
concanvalin A
- CRAC
calcium release activated channel
- CMV
cytomegalovirus
- DIC
differential interference contrast
- EGFP
enhanced green fluorescent protein
- ER
endoplasmic reticulum
- GFP
green fluorescent protein
- HIV-1
human immunodeficiency virus-1
- IP3
inositol-1,4,5-triphosphate
- NFAT
nuclear factor of activated T cells
- NFκB
nuclear factor kappa B
- PHA
phytohemagglutinin
- PMA
phorbol myristate acetate
- PKC
protein kinase C
Footnotes
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Contributor Information
Mingce Zhang, Email: mzhang@peds.uab.edu.
Zhengyu Ma, Email: zma@nemours.org.
Nithianandan Selliah, Email: nithiselliah@gmail.com.
Greta Weiss, Email: weiss@burnet.edu.au.
Anna Genin, Email: agenin@peds.uab.edu.
Terri H. Finkel, Email: tfinkel@nemours.org.
Randy Q. Cron, Email: rcron@peds.uab.edu.
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