Table 3. Primer sets and PCR conditions used in the present study.
Forward primer | Reverse primer | Amplification reaction | |
---|---|---|---|
Primer set 2* | Primer 5.1: (5″-AAG GAT AAC TCT TGT TAA TTG CAG-3″) | Primer 3.2: (5″-TGT CTA AAT TAC CCC AAT TTC C-3″) | 30 cycles of 94 ° C, 57 ° C, and 72 ° C each for 30 s, followed by a final 2 min at 72 ° C |
Primer set 3* | Primer 5.2: (5″-GGA ATA GCT TTT TGA GAA GAA GG-3″) | Primer 3.2: (5″-TGT CTA AAT TAC CCC AAT TTC C-3″) | 30 cycles of 94 ° C, 57 ° C, and 72 ° C each for 30 s, followed by a final 2 min at 72 ° C |
E. histolytica | |||
RRH5: (5″-GCG CCT TTT TAT TCA ATA TAC TCC-3″) | RRH3: (5″-GGA TGA AGA TAT CTT CAC AGG G-3″) | 30 cycles of 94 ° C, 59 ° C , and 72 ° C each for 30 s, followed by a final 2 min at 72 ° C | |
E. dispar | |||
RRD5: (5″-CAT GAG GCG CCT TTT TAT CA-3″) | RRD3: (5″-AGG GGA TGA TGA TAT TGA ACA CAC TC-3″) | 30 cycles of 94 ° C, 59 ° C , and 72 ° C each for 30 s, followed by a final 2 min at 72 ° C |
Notes.
Two primer sets were used to target uninucleated cyst-producing Entamoeba species (E Victory, pers. comm., 2010).