|
Ion torrent reads
|
| S.No |
1 |
2 |
| Fastq file name |
processed_reads.fastq |
mapped_mito.fastq |
| Fastq file size |
239.71 MB |
71.55 MB |
| Time taken for analysis |
8.75 s |
2.76 s |
| Maximum read length |
260 |
260 |
| Minimum read length |
35 |
35 |
| Mean Read Length |
121 |
117 |
| Total number of reads |
890,504 |
292,832 |
| Total number of HQ reads 1* |
890,442 |
292,822 |
| Percentage of HQ reads |
99.993% |
99.997% |
| Total number of bases |
107,866,584 bases |
34,145,801 bases |
| Total number of bases in Mb |
107.8666 Mb |
34.1458 Mb |
| Total number of HQ bases 2* |
105,216,008 bases |
33,218,357 bases |
| Total number of HQ bases in Mb |
105.2160 Mb |
33.2184 Mb |
| Percentage of HQ bases |
97.543% |
97.284% |
| Total number of non-ATGC characters |
0 bases |
0 bases |
| Total number of non-ATGC characters in Mb |
0.000000 Mb |
0.000000 Mb |
| Percentage of non-ATGC characters |
0.000% |
0.000% |
| Number of reads with non-ATGC characters |
0 |
0 |
| Percentage of reads with non-ATGC characters |
0.000% |
0.000% |
|
Illumina reads
|
| S.No |
1 |
| Fastq file name |
SE_ill.fastq |
| Fastq file size |
14.56 MB |
| Time taken for analysis |
0.48 s |
| Maximum read length |
100 |
| Minimum read length |
50 |
| Mean read length |
96 |
| Total number of reads |
62,874 |
| Total number of HQ reads 1* |
62,874 |
| Percentage of HQ reads |
100.000% |
| Total number of bases |
6,053,872 bases |
| Total number of bases in Mb |
6.0539 Mb |
| Total number of HQ bases 2* |
5,982,733 bases |
| Total number of HQ bases in Mb |
5.9827 Mb |
| Percentage of HQ bases |
98.825% |
| Total number of non-ATGC characters |
410 bases |
| Total number of non-ATGC characters in Mb |
0.000410 Mb |
| Percentage of non-ATGC characters |
0.007% |
| Number of reads with non-ATGC characters |
240 |
| Percentage of reads with non-ATGC characters |
0.382% |
