Crystal structure of a NiII–thiosemicarbazone complex showing an unusual cis arrangement of the N,S-donor ligands and anagostic C—H⋯Ni interactions.
Keywords: thiosemicarbazone complex, anagostic interactions, crystal structure
Abstract
The reaction of NiII acetate tetrahydrate with the ligand 4-phenyl-2-(1,2,3,4-tetrahydronaphthalen-1-ylidene)hydrazinecarbothioamide in a 2:1 molar ratio yielded the title compound, [Ni(C16H16N3S)2]·2C4H8O·H2O. The deprotonated ligands act as N,S-donors, forming five-membered metallacycles with the metal ion exhibiting a cis coordination mode unusual for thiosemicarbazone complexes. The NiII ion is four-coordinated in a tetrahedrally distorted square-planar geometry. Trans-arranged anagostic C—H⋯Ni interactions are observed. In the crystal, the complex molecules are linked by water molecules through N—H⋯O and O—H⋯S hydrogen-bonding interactions into centrosymmetric dimers stacked along the c axis, forming rings of graph-set R 4 4(12). Classical O—H⋯O hydrogen bonds involving the water and tetrahydrofuran solvent molecules as well as weak C—H⋯π interactions are also present.
Chemical context
Thiosemicarbazone ligands are N,S-donors that show a wide range of coordination modes (Lobana et al., 2009 ▶). As a part of our ongoing project on the synthesis and structures of thiosemicarbazone derivatives and their metal complexes, the crystal structure of an NiII complex of 2-(1,2,3,4-tetrahydronaphthalen-1-ylidene)-4-phenyl-hydrazinecarbothioamide is reported. The crystal structure of the free ligand was published recently by our group (de Oliveira et al., 2014 ▶), but one of the first reports on the synthesis of thiosemicarbazone derivatives was done by Freund & Schander (1902 ▶). The complex shows a cis coordination mode, which is unusual for this ligands, and two trans-arranged anagostic interactions between C—H groups and the metal ion are also observed. These interactions are typical for several complexes with catalytic applications (Brookhart et al., 2007 ▶).
Structural commentary
In the crystal structure of the title compound, the NiII cation is four-coordinated by two crystallographically independent deprotonated ligands into discrete complexes that are located in general positions (Fig. 1 ▶). The metal displays a remarkable tetrahedrally distorted square-planar coordination geometry (maximum displacement 0.5049 (13) Å for atom N2) with the ligands showing an uncommon cis N 1,S-coordination mode. The values of the Ni—N and N—S bond lengths (Table 1 ▶) and N2—Ni1—S21 and N22—Ni1—S1 bond angles [164.04 (5) and 162.63 (4)°, respectively] confirm the distortion from the ideal coordination geometry. In the complex molecule significant structural changes of the N–N–C–S fragment are observed. For the non-coordinating2-(1,2,3,4-tetrahydronaphthalen-1-ylidene)-4-phenyl-hydrazinecarbothioamide ligand, the N—N, N—C and C—S bond lengths amount to 1.385 (2), 1.364 (2) and 1.677 (2) Å. These lengths indicate the double-bond character of the N=N and C=S bonds, and the single-bond character of the N–C bond (de Oliveira et al., 2014 ▶). In contrast, in the title complex the acidic hydrogen of the hydrazine fragment is removed and the negative charge is delocalized over the N–N–C–S fragment. Therefore, the N—N, N—C and C—S bond lengths amount to 1.405 (2), 1.304 (2) and 1.757 (2) Å respectively in one ligand and 1.401 (2), 1.298 (3) and 1.761 (2) Å in the other. The N—C bond lengths indicate a considerable double-bond character, while the N—N and C—S bond distances are consistent with an increased single-bond character. It is worth noting that two trans-arranged anagostic interactions between aromatic C—H groups and the metal ion are observed (Fig. 2 ▶). For a three-centre–two-electron M⋯H—C agostic interaction, the M⋯H distance should range between 1.8 and 2.3 Å and the M⋯H—C angle should range between 90 and 140°. For an anagostic interaction these values should range from 2.3 to 2.9 Å and from 110 to 170°, respectively (Brookhart et al., 2007 ▶). The title complex shows Ni1⋯H30 and Ni1⋯H10 contacts of 2.61 and 2.45 Å [both values are shorter than the sum of the van der Waals radii for Ni (1.63 Å; Bondi, 1964 ▶) and H (1.10 Å; Rowland & Taylor, 1996 ▶)], and C30—H30—Ni1 and C10—H10—Ni1 angles of 118 and 121°, in agreement with the presence of anagostic interactions.
Figure 1.

The molecular structure of the title compound with displacement ellipsoids drawn at the 40% probability level.
Table 1. Selected bond lengths (Å).
| Ni1—N2 | 1.9313 (14) | Ni1—S21 | 2.1524 (5) |
| Ni1—N22 | 1.9417 (14) | Ni1—S1 | 2.1664 (5) |
Figure 2.
Coordination environment of the metal ion showing the C—H⋯M anagostic interactions (dashed lines).
Supramolecular features
The asymmetric unit of the title complex contains one water and two tetrahydrofurane solvate molecules. The water molecules bridge the complex molecules through N—H⋯O and O—H⋯S hydrogen bonds (Table 2 ▶) into centrosymmetric dimers arranged along the c axis, forming rings of graph-set
(12) (Fig. 3 ▶). In addition, classical O—H⋯O hydrogen bonds between tetrahydrofurane and water molecules and weak C—H⋯π interactions are observed (Table 2 ▶).
Table 2. Hydrogen-bond geometry (Å, °).
Cg1 and Cg2 are the centroids of the C32–C37 and C12–C17 rings, respectively.
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N3—H1N⋯O1 | 0.88 | 2.06 | 2.934 (2) | 172 |
| N23—H2N⋯O51 | 0.88 | 2.02 | 2.895 (2) | 171 |
| O1—H1O1⋯S1i | 0.84 | 2.63 | 3.4609 (16) | 170 |
| O1—H2O1⋯O41ii | 0.84 | 2.00 | 2.836 (2) | 173 |
| C27—H27⋯Cg1iii | 0.95 | 2.80 | 3.595 (2) | 142 |
| C54—H54B⋯Cg2iv | 0.99 | 2.67 | 3.633 (2) | 164 |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
.
Figure 3.

Molecules of the title compound connected through inversion centres via pairs of N—H⋯O and O—H⋯S interactions. Intermolecular N—H⋯O and O—H⋯O hydrogen bonds are also shown. Hydrogen bonds are shown as dashed lines.
Synthesis and crystallization
Starting materials were commercially available and were used without further purification. The synthesis of the ligand was adapted from a procedure reported previously (Freund & Schander, 1902 ▶) and its structure is already published (de Oliveira et al., 2014 ▶). 2-(1,2,3,4-Tetrahydronaphthalen-1-ylidene)-4-phenyl-hydrazinecarbothioamide was dissolved in THF (2 mmol/40 ml) with stirring maintained for 30 min until the solution turned yellow. At the same time, a solution of nickel acetate tetrahydrate (1 mmol/40 ml) in THF was prepared under continuous stirring. A mixture of both solutions was maintained with stirring at room temperature for 6 h. Crystals suitable for X-ray diffraction were obtained by the slow evaporation of the solvent.
Refinement
Crystal data, data collection and structure refinement details are summarized in Table 3 ▶. The imine and water H atoms were located in difference Fourier map, and were refined as riding with N—H = 0.88, O—H = 0.84 Å, and with U iso(H) = 1.2 U eq(N) or 1.5 U eq(O). All other H atoms were positioned with idealized geometry and refined using a riding model approximation, with C—H = 0.95-0.99 Å and with U iso(H) = 1.2 U eq(C). An outlier (17 0 20) was omitted in the last cycles of refinement.
Table 3. Experimental details.
| Crystal data | |
| Chemical formula | [Ni(C16H16N3S)2]·2C4H8O·H2O |
| M r | 809.71 |
| Crystal system, space group | Monoclinic, P21/c |
| Temperature (K) | 200 |
| a, b, c (Å) | 20.9248 (13), 8.7872 (5), 21.2833 (15) |
| β (°) | 92.841 (8) |
| V (Å3) | 3908.6 (4) |
| Z | 4 |
| Radiation type | Mo Kα |
| μ (mm−1) | 0.65 |
| Crystal size (mm) | 0.19 × 0.15 × 0.10 |
| Data collection | |
| Diffractometer | Stoe IPDS1 |
| Absorption correction | Numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008 ▶) |
| T min, T max | 0.787, 0.941 |
| No. of measured, independent and observed [I > 2σ(I)] reflections | 40358, 8412, 7107 |
| R int | 0.064 |
| (sin θ/λ)max (Å−1) | 0.639 |
| Refinement | |
| R[F 2 > 2σ(F 2)], wR(F 2), S | 0.038, 0.090, 1.04 |
| No. of reflections | 8412 |
| No. of parameters | 488 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.32, −0.48 |
Supplementary Material
Crystal structure: contains datablock(s) I, publication_text. DOI: 10.1107/S1600536814016079/rz5128sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814016079/rz5128Isup2.hkl
CCDC reference: 1013220
Additional supporting information: crystallographic information; 3D view; checkCIF report
Acknowledgments
We gratefully acknowledge the financial support by the State of Schleswig–Holstein, Germany. We thank Professor Dr Wolfgang Bensch for access to his experimental facilities. BRSF thanks the CNPq/UFS for the award of a PIBIC scholarship and ABO acknowledges financial support through the FAPITEC/SE/FUNTEC/CNPq PPP 04/2011 program.
supplementary crystallographic information
Crystal data
| [Ni(C16H16N3S)2]·2C4H8O·H2O | F(000) = 1712 |
| Mr = 809.71 | Dx = 1.376 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 40358 reflections |
| a = 20.9248 (13) Å | θ = 2.5–27.0° |
| b = 8.7872 (5) Å | µ = 0.65 mm−1 |
| c = 21.2833 (15) Å | T = 200 K |
| β = 92.841 (8)° | Prism, red |
| V = 3908.6 (4) Å3 | 0.19 × 0.15 × 0.10 mm |
| Z = 4 |
Data collection
| Stoe IPDS-1 diffractometer | 8412 independent reflections |
| Radiation source: fine-focus sealed tube, Stoe IPDS-1 | 7107 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.064 |
| φ scans | θmax = 27.0°, θmin = 2.5° |
| Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008) | h = −26→26 |
| Tmin = 0.787, Tmax = 0.941 | k = −11→11 |
| 40358 measured reflections | l = −27→27 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.038 | H-atom parameters constrained |
| wR(F2) = 0.090 | w = 1/[σ2(Fo2) + (0.0495P)2 + 1.531P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.04 | (Δ/σ)max = 0.002 |
| 8412 reflections | Δρmax = 0.32 e Å−3 |
| 488 parameters | Δρmin = −0.48 e Å−3 |
| 0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0043 (6) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Ni1 | 0.763345 (10) | 0.57702 (2) | 0.542635 (10) | 0.01599 (8) | |
| S1 | 0.85498 (2) | 0.51110 (5) | 0.50807 (2) | 0.02150 (10) | |
| C1 | 0.84794 (8) | 0.63429 (18) | 0.44282 (8) | 0.0176 (3) | |
| N1 | 0.80744 (7) | 0.74626 (15) | 0.43901 (6) | 0.0193 (3) | |
| N2 | 0.77215 (7) | 0.75911 (15) | 0.49300 (6) | 0.0176 (3) | |
| C2 | 0.74873 (8) | 0.89550 (17) | 0.50036 (8) | 0.0176 (3) | |
| C3 | 0.75309 (9) | 1.01216 (19) | 0.44862 (8) | 0.0239 (4) | |
| H3A | 0.7289 | 0.9747 | 0.4106 | 0.029* | |
| H3B | 0.7984 | 1.0230 | 0.4381 | 0.029* | |
| C4 | 0.72730 (9) | 1.16776 (19) | 0.46591 (9) | 0.0272 (4) | |
| H4A | 0.7214 | 1.2308 | 0.4275 | 0.033* | |
| H4B | 0.7585 | 1.2197 | 0.4950 | 0.033* | |
| C5 | 0.66362 (10) | 1.1516 (2) | 0.49709 (10) | 0.0312 (4) | |
| H5A | 0.6470 | 1.2536 | 0.5076 | 0.037* | |
| H5B | 0.6320 | 1.1016 | 0.4677 | 0.037* | |
| C6 | 0.67272 (9) | 1.05810 (19) | 0.55612 (9) | 0.0249 (4) | |
| C7 | 0.64126 (10) | 1.0929 (2) | 0.61052 (11) | 0.0339 (5) | |
| H7 | 0.6105 | 1.1724 | 0.6094 | 0.041* | |
| C8 | 0.65380 (11) | 1.0144 (2) | 0.66589 (11) | 0.0380 (5) | |
| H8 | 0.6306 | 1.0376 | 0.7019 | 0.046* | |
| C9 | 0.70038 (11) | 0.9014 (2) | 0.66901 (10) | 0.0334 (4) | |
| H9 | 0.7103 | 0.8502 | 0.7076 | 0.040* | |
| C10 | 0.73221 (9) | 0.8639 (2) | 0.61548 (8) | 0.0249 (4) | |
| H10 | 0.7646 | 0.7880 | 0.6177 | 0.030* | |
| C11 | 0.71703 (8) | 0.93683 (18) | 0.55811 (8) | 0.0204 (3) | |
| N3 | 0.88815 (7) | 0.60673 (16) | 0.39553 (7) | 0.0219 (3) | |
| H1N | 0.9185 | 0.5384 | 0.4020 | 0.026* | |
| C12 | 0.88886 (8) | 0.67796 (19) | 0.33607 (8) | 0.0208 (3) | |
| C13 | 0.84043 (10) | 0.7741 (2) | 0.31185 (9) | 0.0281 (4) | |
| H13 | 0.8049 | 0.7976 | 0.3362 | 0.034* | |
| C14 | 0.84464 (12) | 0.8354 (2) | 0.25151 (9) | 0.0358 (5) | |
| H14 | 0.8116 | 0.9004 | 0.2351 | 0.043* | |
| C15 | 0.89587 (12) | 0.8032 (2) | 0.21546 (10) | 0.0384 (5) | |
| H15 | 0.8985 | 0.8465 | 0.1748 | 0.046* | |
| C16 | 0.94352 (10) | 0.7069 (3) | 0.23938 (9) | 0.0358 (5) | |
| H16 | 0.9787 | 0.6832 | 0.2146 | 0.043* | |
| C17 | 0.94061 (9) | 0.6444 (2) | 0.29920 (9) | 0.0273 (4) | |
| H17 | 0.9738 | 0.5790 | 0.3150 | 0.033* | |
| S21 | 0.77040 (2) | 0.40904 (5) | 0.61626 (2) | 0.02150 (10) | |
| C21 | 0.69687 (8) | 0.45636 (18) | 0.64762 (8) | 0.0189 (3) | |
| N21 | 0.65424 (7) | 0.54193 (16) | 0.61843 (7) | 0.0214 (3) | |
| N22 | 0.67275 (7) | 0.58376 (15) | 0.55827 (6) | 0.0179 (3) | |
| C22 | 0.62487 (8) | 0.63338 (18) | 0.52238 (8) | 0.0185 (3) | |
| C23 | 0.56144 (8) | 0.6663 (2) | 0.55078 (9) | 0.0265 (4) | |
| H23A | 0.5686 | 0.7398 | 0.5857 | 0.032* | |
| H23B | 0.5451 | 0.5710 | 0.5689 | 0.032* | |
| C24 | 0.51066 (9) | 0.7303 (2) | 0.50437 (10) | 0.0314 (4) | |
| H24A | 0.4914 | 0.6466 | 0.4787 | 0.038* | |
| H24B | 0.4763 | 0.7789 | 0.5276 | 0.038* | |
| C25 | 0.54023 (9) | 0.8468 (2) | 0.46163 (10) | 0.0298 (4) | |
| H25A | 0.5068 | 0.8908 | 0.4325 | 0.036* | |
| H25B | 0.5599 | 0.9303 | 0.4871 | 0.036* | |
| C26 | 0.59041 (9) | 0.7688 (2) | 0.42476 (9) | 0.0244 (4) | |
| C27 | 0.59580 (11) | 0.7956 (2) | 0.36072 (9) | 0.0350 (4) | |
| H27 | 0.5691 | 0.8697 | 0.3402 | 0.042* | |
| C28 | 0.63934 (11) | 0.7161 (3) | 0.32660 (9) | 0.0376 (5) | |
| H28 | 0.6429 | 0.7375 | 0.2832 | 0.045* | |
| C29 | 0.67788 (10) | 0.6050 (2) | 0.35546 (9) | 0.0306 (4) | |
| H29 | 0.7070 | 0.5487 | 0.3317 | 0.037* | |
| C30 | 0.67348 (9) | 0.57702 (19) | 0.41940 (9) | 0.0233 (4) | |
| H30 | 0.6994 | 0.5005 | 0.4392 | 0.028* | |
| C31 | 0.63103 (8) | 0.66085 (18) | 0.45479 (8) | 0.0195 (3) | |
| N23 | 0.68631 (7) | 0.39556 (17) | 0.70534 (7) | 0.0229 (3) | |
| H2N | 0.7178 | 0.3384 | 0.7209 | 0.027* | |
| C32 | 0.62840 (9) | 0.38489 (19) | 0.73636 (8) | 0.0221 (3) | |
| C33 | 0.57121 (9) | 0.4550 (2) | 0.71649 (9) | 0.0285 (4) | |
| H33 | 0.5697 | 0.5192 | 0.6806 | 0.034* | |
| C34 | 0.51621 (10) | 0.4305 (2) | 0.74952 (10) | 0.0339 (4) | |
| H34 | 0.4772 | 0.4776 | 0.7354 | 0.041* | |
| C35 | 0.51734 (10) | 0.3391 (2) | 0.80225 (10) | 0.0356 (5) | |
| H35 | 0.4795 | 0.3227 | 0.8242 | 0.043* | |
| C36 | 0.57417 (11) | 0.2718 (2) | 0.82274 (10) | 0.0357 (5) | |
| H36 | 0.5755 | 0.2098 | 0.8594 | 0.043* | |
| C37 | 0.62939 (10) | 0.2937 (2) | 0.79037 (9) | 0.0298 (4) | |
| H37 | 0.6682 | 0.2464 | 0.8050 | 0.036* | |
| O1 | 0.99770 (7) | 0.40290 (16) | 0.41952 (8) | 0.0417 (4) | |
| H1O1 | 1.0309 | 0.4309 | 0.4401 | 0.062* | |
| H2O1 | 1.0030 | 0.3084 | 0.4169 | 0.062* | |
| O41 | 0.97593 (8) | 0.58636 (16) | 0.08169 (9) | 0.0448 (4) | |
| C41 | 0.90931 (12) | 0.5585 (3) | 0.07052 (16) | 0.0538 (7) | |
| H41A | 0.8912 | 0.6291 | 0.0381 | 0.065* | |
| H41B | 0.8864 | 0.5735 | 0.1097 | 0.065* | |
| C42 | 0.90244 (13) | 0.3977 (3) | 0.04853 (15) | 0.0531 (7) | |
| H42A | 0.8981 | 0.3930 | 0.0020 | 0.064* | |
| H42B | 0.8645 | 0.3492 | 0.0661 | 0.064* | |
| C43 | 0.96318 (13) | 0.3203 (3) | 0.07266 (12) | 0.0455 (6) | |
| H43A | 0.9842 | 0.2683 | 0.0380 | 0.055* | |
| H43B | 0.9540 | 0.2443 | 0.1053 | 0.055* | |
| C44 | 1.00526 (12) | 0.4463 (2) | 0.10005 (13) | 0.0448 (6) | |
| H44A | 1.0089 | 0.4382 | 0.1465 | 0.054* | |
| H44B | 1.0487 | 0.4394 | 0.0838 | 0.054* | |
| O51 | 0.78020 (7) | 0.19400 (17) | 0.76536 (7) | 0.0344 (3) | |
| C51 | 0.81446 (12) | 0.2516 (3) | 0.82019 (11) | 0.0467 (6) | |
| H51A | 0.8107 | 0.1802 | 0.8558 | 0.056* | |
| H51B | 0.7967 | 0.3512 | 0.8323 | 0.056* | |
| C52 | 0.88412 (11) | 0.2691 (3) | 0.80450 (11) | 0.0408 (5) | |
| H52A | 0.9120 | 0.2021 | 0.8314 | 0.049* | |
| H52B | 0.8985 | 0.3758 | 0.8103 | 0.049* | |
| C53 | 0.88546 (10) | 0.2222 (2) | 0.73570 (10) | 0.0347 (4) | |
| H53A | 0.8835 | 0.3122 | 0.7077 | 0.042* | |
| H53B | 0.9245 | 0.1630 | 0.7278 | 0.042* | |
| C54 | 0.82624 (9) | 0.1255 (2) | 0.72640 (10) | 0.0297 (4) | |
| H54A | 0.8106 | 0.1259 | 0.6817 | 0.036* | |
| H54B | 0.8351 | 0.0192 | 0.7395 | 0.036* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Ni1 | 0.01618 (12) | 0.01577 (11) | 0.01627 (11) | 0.00208 (7) | 0.00338 (8) | 0.00228 (7) |
| S1 | 0.0184 (2) | 0.0223 (2) | 0.0243 (2) | 0.00532 (15) | 0.00491 (16) | 0.00550 (15) |
| C1 | 0.0171 (8) | 0.0168 (7) | 0.0191 (7) | −0.0003 (6) | 0.0028 (6) | −0.0024 (6) |
| N1 | 0.0229 (7) | 0.0191 (6) | 0.0164 (6) | 0.0042 (5) | 0.0067 (6) | −0.0001 (5) |
| N2 | 0.0176 (7) | 0.0197 (6) | 0.0157 (6) | 0.0022 (5) | 0.0035 (5) | −0.0018 (5) |
| C2 | 0.0175 (8) | 0.0163 (7) | 0.0189 (8) | 0.0006 (6) | 0.0019 (6) | −0.0006 (6) |
| C3 | 0.0301 (9) | 0.0188 (8) | 0.0234 (8) | 0.0055 (7) | 0.0056 (7) | 0.0026 (6) |
| C4 | 0.0326 (10) | 0.0158 (8) | 0.0335 (10) | 0.0048 (7) | 0.0065 (8) | 0.0019 (7) |
| C5 | 0.0275 (10) | 0.0212 (8) | 0.0451 (11) | 0.0079 (7) | 0.0031 (9) | −0.0016 (8) |
| C6 | 0.0211 (9) | 0.0185 (8) | 0.0358 (10) | −0.0011 (6) | 0.0064 (8) | −0.0077 (7) |
| C7 | 0.0285 (10) | 0.0273 (9) | 0.0473 (12) | −0.0029 (7) | 0.0167 (9) | −0.0147 (8) |
| C8 | 0.0411 (12) | 0.0367 (11) | 0.0384 (11) | −0.0119 (9) | 0.0229 (10) | −0.0165 (9) |
| C9 | 0.0423 (12) | 0.0348 (10) | 0.0242 (9) | −0.0111 (8) | 0.0117 (9) | −0.0071 (8) |
| C10 | 0.0308 (10) | 0.0237 (8) | 0.0204 (8) | −0.0057 (7) | 0.0049 (7) | −0.0052 (7) |
| C11 | 0.0209 (8) | 0.0191 (7) | 0.0217 (8) | −0.0034 (6) | 0.0062 (7) | −0.0051 (6) |
| N3 | 0.0213 (7) | 0.0228 (7) | 0.0220 (7) | 0.0063 (6) | 0.0054 (6) | −0.0005 (6) |
| C12 | 0.0224 (8) | 0.0216 (8) | 0.0187 (8) | −0.0039 (6) | 0.0055 (7) | −0.0036 (6) |
| C13 | 0.0348 (10) | 0.0295 (9) | 0.0205 (8) | 0.0045 (8) | 0.0073 (8) | 0.0007 (7) |
| C14 | 0.0518 (13) | 0.0330 (10) | 0.0229 (9) | 0.0043 (9) | 0.0053 (9) | 0.0045 (8) |
| C15 | 0.0557 (14) | 0.0387 (11) | 0.0217 (9) | −0.0103 (10) | 0.0102 (9) | 0.0022 (8) |
| C16 | 0.0345 (11) | 0.0485 (12) | 0.0258 (10) | −0.0151 (9) | 0.0146 (8) | −0.0088 (9) |
| C17 | 0.0224 (9) | 0.0340 (9) | 0.0261 (9) | −0.0048 (7) | 0.0068 (7) | −0.0081 (7) |
| S21 | 0.0219 (2) | 0.0233 (2) | 0.0197 (2) | 0.00565 (15) | 0.00496 (16) | 0.00627 (15) |
| C21 | 0.0214 (8) | 0.0183 (7) | 0.0171 (7) | −0.0010 (6) | 0.0026 (6) | 0.0006 (6) |
| N21 | 0.0214 (7) | 0.0243 (7) | 0.0189 (7) | 0.0009 (6) | 0.0060 (6) | 0.0042 (5) |
| N22 | 0.0197 (7) | 0.0178 (6) | 0.0164 (6) | 0.0016 (5) | 0.0029 (5) | 0.0011 (5) |
| C22 | 0.0192 (8) | 0.0160 (7) | 0.0204 (8) | 0.0006 (6) | 0.0022 (6) | −0.0015 (6) |
| C23 | 0.0189 (8) | 0.0323 (9) | 0.0288 (9) | 0.0031 (7) | 0.0042 (7) | 0.0005 (7) |
| C24 | 0.0186 (9) | 0.0361 (10) | 0.0394 (11) | 0.0043 (7) | 0.0004 (8) | −0.0007 (8) |
| C25 | 0.0258 (10) | 0.0294 (9) | 0.0338 (10) | 0.0105 (7) | −0.0030 (8) | 0.0006 (8) |
| C26 | 0.0239 (9) | 0.0239 (8) | 0.0250 (9) | 0.0041 (7) | −0.0035 (7) | −0.0011 (7) |
| C27 | 0.0404 (12) | 0.0388 (11) | 0.0251 (9) | 0.0109 (9) | −0.0056 (8) | 0.0050 (8) |
| C28 | 0.0486 (13) | 0.0465 (12) | 0.0175 (9) | 0.0073 (10) | −0.0003 (8) | 0.0013 (8) |
| C29 | 0.0337 (11) | 0.0358 (10) | 0.0225 (9) | 0.0028 (8) | 0.0034 (8) | −0.0079 (7) |
| C30 | 0.0245 (9) | 0.0214 (8) | 0.0238 (8) | 0.0026 (7) | −0.0004 (7) | −0.0041 (6) |
| C31 | 0.0196 (8) | 0.0192 (7) | 0.0194 (8) | 0.0008 (6) | −0.0015 (6) | −0.0029 (6) |
| N23 | 0.0228 (8) | 0.0277 (7) | 0.0185 (7) | 0.0042 (6) | 0.0039 (6) | 0.0058 (6) |
| C32 | 0.0261 (9) | 0.0223 (8) | 0.0183 (8) | −0.0021 (6) | 0.0064 (7) | −0.0010 (6) |
| C33 | 0.0273 (10) | 0.0348 (10) | 0.0238 (9) | 0.0009 (8) | 0.0056 (8) | 0.0047 (7) |
| C34 | 0.0248 (10) | 0.0429 (11) | 0.0343 (11) | −0.0005 (8) | 0.0068 (8) | 0.0019 (8) |
| C35 | 0.0335 (11) | 0.0394 (11) | 0.0355 (11) | −0.0082 (9) | 0.0170 (9) | 0.0019 (9) |
| C36 | 0.0443 (12) | 0.0347 (10) | 0.0294 (10) | −0.0021 (9) | 0.0153 (9) | 0.0080 (8) |
| C37 | 0.0347 (11) | 0.0301 (9) | 0.0252 (9) | 0.0038 (8) | 0.0077 (8) | 0.0063 (7) |
| O1 | 0.0317 (8) | 0.0309 (7) | 0.0613 (11) | 0.0075 (6) | −0.0092 (7) | −0.0028 (7) |
| O41 | 0.0357 (9) | 0.0262 (7) | 0.0711 (12) | −0.0026 (6) | −0.0108 (8) | 0.0095 (7) |
| C41 | 0.0352 (13) | 0.0342 (11) | 0.090 (2) | 0.0029 (9) | −0.0133 (13) | −0.0017 (12) |
| C42 | 0.0458 (14) | 0.0434 (13) | 0.0685 (18) | −0.0082 (11) | −0.0121 (13) | −0.0022 (12) |
| C43 | 0.0606 (16) | 0.0306 (10) | 0.0443 (13) | 0.0010 (10) | −0.0074 (11) | −0.0035 (9) |
| C44 | 0.0422 (13) | 0.0310 (10) | 0.0602 (15) | 0.0027 (9) | −0.0069 (11) | 0.0046 (10) |
| O51 | 0.0256 (7) | 0.0425 (8) | 0.0351 (8) | 0.0066 (6) | 0.0017 (6) | 0.0013 (6) |
| C51 | 0.0449 (14) | 0.0643 (15) | 0.0309 (11) | 0.0098 (12) | 0.0022 (10) | −0.0047 (11) |
| C52 | 0.0393 (12) | 0.0409 (11) | 0.0409 (12) | 0.0005 (9) | −0.0103 (10) | −0.0025 (9) |
| C53 | 0.0279 (10) | 0.0370 (11) | 0.0395 (11) | 0.0015 (8) | 0.0039 (9) | 0.0030 (9) |
| C54 | 0.0296 (10) | 0.0266 (9) | 0.0329 (10) | 0.0055 (7) | 0.0006 (8) | 0.0016 (7) |
Geometric parameters (Å, º)
| Ni1—N2 | 1.9313 (14) | C24—H24B | 0.9900 |
| Ni1—N22 | 1.9417 (14) | C25—C26 | 1.506 (3) |
| Ni1—S21 | 2.1524 (5) | C25—H25A | 0.9900 |
| Ni1—S1 | 2.1664 (5) | C25—H25B | 0.9900 |
| S1—C1 | 1.7612 (17) | C26—C27 | 1.393 (3) |
| C1—N1 | 1.298 (2) | C26—C31 | 1.406 (2) |
| C1—N3 | 1.365 (2) | C27—C28 | 1.382 (3) |
| N1—N2 | 1.4008 (18) | C27—H27 | 0.9500 |
| N2—C2 | 1.307 (2) | C28—C29 | 1.390 (3) |
| C2—C11 | 1.471 (2) | C28—H28 | 0.9500 |
| C2—C3 | 1.511 (2) | C29—C30 | 1.390 (3) |
| C3—C4 | 1.522 (2) | C29—H29 | 0.9500 |
| C3—H3A | 0.9900 | C30—C31 | 1.402 (2) |
| C3—H3B | 0.9900 | C30—H30 | 0.9500 |
| C4—C5 | 1.524 (3) | N23—C32 | 1.412 (2) |
| C4—H4A | 0.9900 | N23—H2N | 0.8800 |
| C4—H4B | 0.9900 | C32—C33 | 1.393 (3) |
| C5—C6 | 1.505 (3) | C32—C37 | 1.401 (2) |
| C5—H5A | 0.9900 | C33—C34 | 1.395 (3) |
| C5—H5B | 0.9900 | C33—H33 | 0.9500 |
| C6—C7 | 1.394 (3) | C34—C35 | 1.379 (3) |
| C6—C11 | 1.412 (2) | C34—H34 | 0.9500 |
| C7—C8 | 1.379 (3) | C35—C36 | 1.379 (3) |
| C7—H7 | 0.9500 | C35—H35 | 0.9500 |
| C8—C9 | 1.390 (3) | C36—C37 | 1.388 (3) |
| C8—H8 | 0.9500 | C36—H36 | 0.9500 |
| C9—C10 | 1.388 (3) | C37—H37 | 0.9500 |
| C9—H9 | 0.9500 | O1—H1O1 | 0.8400 |
| C10—C11 | 1.401 (3) | O1—H2O1 | 0.8397 |
| C10—H10 | 0.9500 | O41—C44 | 1.422 (3) |
| N3—C12 | 1.413 (2) | O41—C41 | 1.424 (3) |
| N3—H1N | 0.8798 | C41—C42 | 1.493 (3) |
| C12—C13 | 1.398 (3) | C41—H41A | 0.9900 |
| C12—C17 | 1.400 (2) | C41—H41B | 0.9900 |
| C13—C14 | 1.400 (3) | C42—C43 | 1.509 (4) |
| C13—H13 | 0.9500 | C42—H42A | 0.9900 |
| C14—C15 | 1.378 (3) | C42—H42B | 0.9900 |
| C14—H14 | 0.9500 | C43—C44 | 1.513 (3) |
| C15—C16 | 1.386 (3) | C43—H43A | 0.9900 |
| C15—H15 | 0.9500 | C43—H43B | 0.9900 |
| C16—C17 | 1.391 (3) | C44—H44A | 0.9900 |
| C16—H16 | 0.9500 | C44—H44B | 0.9900 |
| C17—H17 | 0.9500 | O51—C51 | 1.431 (3) |
| S21—C21 | 1.7571 (17) | O51—C54 | 1.434 (2) |
| C21—N21 | 1.301 (2) | C51—C52 | 1.519 (3) |
| C21—N23 | 1.368 (2) | C51—H51A | 0.9900 |
| N21—N22 | 1.4050 (19) | C51—H51B | 0.9900 |
| N22—C22 | 1.304 (2) | C52—C53 | 1.523 (3) |
| C22—C31 | 1.470 (2) | C52—H52A | 0.9900 |
| C22—C23 | 1.513 (2) | C52—H52B | 0.9900 |
| C23—C24 | 1.522 (3) | C53—C54 | 1.508 (3) |
| C23—H23A | 0.9900 | C53—H53A | 0.9900 |
| C23—H23B | 0.9900 | C53—H53B | 0.9900 |
| C24—C25 | 1.521 (3) | C54—H54A | 0.9900 |
| C24—H24A | 0.9900 | C54—H54B | 0.9900 |
| N2—Ni1—N22 | 100.89 (6) | C26—C25—C24 | 108.67 (15) |
| N2—Ni1—S21 | 164.04 (5) | C26—C25—H25A | 110.0 |
| N22—Ni1—S21 | 85.90 (4) | C24—C25—H25A | 110.0 |
| N2—Ni1—S1 | 85.74 (4) | C26—C25—H25B | 110.0 |
| N22—Ni1—S1 | 162.63 (4) | C24—C25—H25B | 110.0 |
| S21—Ni1—S1 | 91.944 (18) | H25A—C25—H25B | 108.3 |
| C1—S1—Ni1 | 93.59 (5) | C27—C26—C31 | 118.83 (17) |
| N1—C1—N3 | 120.84 (15) | C27—C26—C25 | 121.67 (17) |
| N1—C1—S1 | 122.94 (12) | C31—C26—C25 | 119.43 (16) |
| N3—C1—S1 | 116.22 (12) | C28—C27—C26 | 121.06 (18) |
| C1—N1—N2 | 112.26 (13) | C28—C27—H27 | 119.5 |
| C2—N2—N1 | 112.85 (13) | C26—C27—H27 | 119.5 |
| C2—N2—Ni1 | 130.35 (11) | C27—C28—C29 | 120.40 (18) |
| N1—N2—Ni1 | 116.77 (10) | C27—C28—H28 | 119.8 |
| N2—C2—C11 | 120.93 (14) | C29—C28—H28 | 119.8 |
| N2—C2—C3 | 119.88 (14) | C28—C29—C30 | 119.46 (18) |
| C11—C2—C3 | 119.19 (14) | C28—C29—H29 | 120.3 |
| C2—C3—C4 | 113.48 (14) | C30—C29—H29 | 120.3 |
| C2—C3—H3A | 108.9 | C29—C30—C31 | 120.48 (17) |
| C4—C3—H3A | 108.9 | C29—C30—H30 | 119.8 |
| C2—C3—H3B | 108.9 | C31—C30—H30 | 119.8 |
| C4—C3—H3B | 108.9 | C30—C31—C26 | 119.68 (16) |
| H3A—C3—H3B | 107.7 | C30—C31—C22 | 121.87 (15) |
| C3—C4—C5 | 110.47 (15) | C26—C31—C22 | 118.36 (15) |
| C3—C4—H4A | 109.6 | C21—N23—C32 | 128.82 (16) |
| C5—C4—H4A | 109.6 | C21—N23—H2N | 114.1 |
| C3—C4—H4B | 109.6 | C32—N23—H2N | 115.6 |
| C5—C4—H4B | 109.6 | C33—C32—C37 | 118.67 (17) |
| H4A—C4—H4B | 108.1 | C33—C32—N23 | 124.97 (16) |
| C6—C5—C4 | 109.69 (16) | C37—C32—N23 | 116.34 (17) |
| C6—C5—H5A | 109.7 | C32—C33—C34 | 119.79 (18) |
| C4—C5—H5A | 109.7 | C32—C33—H33 | 120.1 |
| C6—C5—H5B | 109.7 | C34—C33—H33 | 120.1 |
| C4—C5—H5B | 109.7 | C35—C34—C33 | 121.2 (2) |
| H5A—C5—H5B | 108.2 | C35—C34—H34 | 119.4 |
| C7—C6—C11 | 118.49 (18) | C33—C34—H34 | 119.4 |
| C7—C6—C5 | 121.87 (17) | C34—C35—C36 | 119.13 (18) |
| C11—C6—C5 | 119.53 (16) | C34—C35—H35 | 120.4 |
| C8—C7—C6 | 121.49 (19) | C36—C35—H35 | 120.4 |
| C8—C7—H7 | 119.3 | C35—C36—C37 | 120.63 (19) |
| C6—C7—H7 | 119.3 | C35—C36—H36 | 119.7 |
| C7—C8—C9 | 120.08 (18) | C37—C36—H36 | 119.7 |
| C7—C8—H8 | 120.0 | C36—C37—C32 | 120.52 (19) |
| C9—C8—H8 | 120.0 | C36—C37—H37 | 119.7 |
| C10—C9—C8 | 119.6 (2) | C32—C37—H37 | 119.7 |
| C10—C9—H9 | 120.2 | H1O1—O1—H2O1 | 102.5 |
| C8—C9—H9 | 120.2 | C44—O41—C41 | 107.61 (17) |
| C9—C10—C11 | 120.61 (18) | O41—C41—C42 | 107.1 (2) |
| C9—C10—H10 | 119.7 | O41—C41—H41A | 110.3 |
| C11—C10—H10 | 119.7 | C42—C41—H41A | 110.3 |
| C10—C11—C6 | 119.45 (16) | O41—C41—H41B | 110.3 |
| C10—C11—C2 | 121.53 (15) | C42—C41—H41B | 110.3 |
| C6—C11—C2 | 118.94 (16) | H41A—C41—H41B | 108.6 |
| C1—N3—C12 | 128.03 (15) | C41—C42—C43 | 104.7 (2) |
| C1—N3—H1N | 118.2 | C41—C42—H42A | 110.8 |
| C12—N3—H1N | 113.8 | C43—C42—H42A | 110.8 |
| C13—C12—C17 | 119.16 (17) | C41—C42—H42B | 110.8 |
| C13—C12—N3 | 123.95 (15) | C43—C42—H42B | 110.8 |
| C17—C12—N3 | 116.85 (16) | H42A—C42—H42B | 108.9 |
| C12—C13—C14 | 119.57 (18) | C42—C43—C44 | 105.43 (19) |
| C12—C13—H13 | 120.2 | C42—C43—H43A | 110.7 |
| C14—C13—H13 | 120.2 | C44—C43—H43A | 110.7 |
| C15—C14—C13 | 121.2 (2) | C42—C43—H43B | 110.7 |
| C15—C14—H14 | 119.4 | C44—C43—H43B | 110.7 |
| C13—C14—H14 | 119.4 | H43A—C43—H43B | 108.8 |
| C14—C15—C16 | 119.09 (19) | O41—C44—C43 | 107.00 (19) |
| C14—C15—H15 | 120.5 | O41—C44—H44A | 110.3 |
| C16—C15—H15 | 120.5 | C43—C44—H44A | 110.3 |
| C15—C16—C17 | 120.95 (18) | O41—C44—H44B | 110.3 |
| C15—C16—H16 | 119.5 | C43—C44—H44B | 110.3 |
| C17—C16—H16 | 119.5 | H44A—C44—H44B | 108.6 |
| C16—C17—C12 | 120.02 (19) | C51—O51—C54 | 107.23 (16) |
| C16—C17—H17 | 120.0 | O51—C51—C52 | 107.68 (18) |
| C12—C17—H17 | 120.0 | O51—C51—H51A | 110.2 |
| C21—S21—Ni1 | 94.84 (6) | C52—C51—H51A | 110.2 |
| N21—C21—N23 | 121.14 (15) | O51—C51—H51B | 110.2 |
| N21—C21—S21 | 123.24 (13) | C52—C51—H51B | 110.2 |
| N23—C21—S21 | 115.61 (13) | H51A—C51—H51B | 108.5 |
| C21—N21—N22 | 111.90 (14) | C51—C52—C53 | 104.34 (18) |
| C22—N22—N21 | 112.50 (14) | C51—C52—H52A | 110.9 |
| C22—N22—Ni1 | 129.64 (12) | C53—C52—H52A | 110.9 |
| N21—N22—Ni1 | 117.63 (11) | C51—C52—H52B | 110.9 |
| N22—C22—C31 | 121.71 (15) | C53—C52—H52B | 110.9 |
| N22—C22—C23 | 119.56 (15) | H52A—C52—H52B | 108.9 |
| C31—C22—C23 | 118.72 (15) | C54—C53—C52 | 102.98 (17) |
| C22—C23—C24 | 114.16 (15) | C54—C53—H53A | 111.2 |
| C22—C23—H23A | 108.7 | C52—C53—H53A | 111.2 |
| C24—C23—H23A | 108.7 | C54—C53—H53B | 111.2 |
| C22—C23—H23B | 108.7 | C52—C53—H53B | 111.2 |
| C24—C23—H23B | 108.7 | H53A—C53—H53B | 109.1 |
| H23A—C23—H23B | 107.6 | O51—C54—C53 | 105.00 (16) |
| C25—C24—C23 | 110.19 (16) | O51—C54—H54A | 110.7 |
| C25—C24—H24A | 109.6 | C53—C54—H54A | 110.7 |
| C23—C24—H24A | 109.6 | O51—C54—H54B | 110.7 |
| C25—C24—H24B | 109.6 | C53—C54—H54B | 110.7 |
| C23—C24—H24B | 109.6 | H54A—C54—H54B | 108.8 |
| H24A—C24—H24B | 108.1 |
Hydrogen-bond geometry (Å, º)
Cg1 and Cg2 are the centroids of the C32–C37 and C12–C17 rings, respectively.
| D—H···A | D—H | H···A | D···A | D—H···A |
| N3—H1N···O1 | 0.88 | 2.06 | 2.934 (2) | 172 |
| N23—H2N···O51 | 0.88 | 2.02 | 2.895 (2) | 171 |
| O1—H1O1···S1i | 0.84 | 2.63 | 3.4609 (16) | 170 |
| O1—H2O1···O41ii | 0.84 | 2.00 | 2.836 (2) | 173 |
| C27—H27···Cg1iii | 0.95 | 2.80 | 3.595 (2) | 142 |
| C54—H54B···Cg2iv | 0.99 | 2.67 | 3.633 (2) | 164 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+2, y−1/2, −z+1/2; (iii) x, −y+3/2, z−1/2; (iv) x, −y+1/2, z+1/2.
References
- Bondi, A. (1964). J. Phys. Chem. 68, 441–452.
- Brandenburg, K. (2006). DIAMOND Crystal Impact GbR, Bonn, Germany.
- Brookhart, M., Green, M. L. H. & Parkin, G. (2007). Proc. Natl. Acad. Sci. 104, 6908–6914. [DOI] [PMC free article] [PubMed]
- Freund, M. & Schander, A. (1902). Chem. Ber. 35, 2602–2606.
- Lobana, T. S., Sharma, R., Bawa, G. & Khanna, S. (2009). Coord. Chem. Rev. 253, 977–1055.
- Oliveira, A. B. de, Feitosa, B. R. S., Näther, C. & Jess, I. (2014). Acta Cryst. E70, o205. [DOI] [PMC free article] [PubMed]
- Rowland, R. S. & Taylor, R. (1996). J. Phys. Chem. 100, 7384–7391.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Stoe & Cie (2008). X-AREA, X-RED32 and X-SHAPE Stoe & Cie, Darmstadt, Germany.
- Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, publication_text. DOI: 10.1107/S1600536814016079/rz5128sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814016079/rz5128Isup2.hkl
CCDC reference: 1013220
Additional supporting information: crystallographic information; 3D view; checkCIF report

