Abstract
Microparticles (MPs) are small membrane-bound vesicles that arise from dead and dying cells and display pro-inflammatory and pro-thrombotic activity. As shown previously, the RAW 264.7 murine macrophage cell line can release MPs following stimulation with lipopolysaccharide (LPS) or polyinosinic:polycytidylic acid [poly (I:C)], ligands of TLR4 and TLR3 respectively. To determine the relationship of these MPs to those released during apoptosis, the nucleic acid content of MPs from cultures stimulated with LPS or poly (I:C) was compared to the nucleic acid content of MPs from untreated cells or cells induced to undergo apoptosis by treatment with etoposide or staurosporine (STS). As results of these studies showed, MPs from activated, apoptotic and untreated cells had features in common as demonstrated by binding of the nucleic acid dyes SYTO 13 and propidium iodide; molecular weight of DNA; and binding of monoclonal anti-DNA and anti-nucleosome antibodies. While MPs from the different culture conditions all contained ribosomal RNA, ribosomal RNA from MPs from STS-treated cells showed cleavage and degradation. Taken together, these studies indicate that the nucleic acid content of MPs from activated and apoptotic cells have important similarities, suggesting that events during TLR activation may lead to apoptosis and subsequent MP release.
Keywords: microparticles, macrophages, apoptosis, LPS
Introduction
Microparticles (MPs) are small membrane-bound vesicles that arise from activated and dying cells by a blebbing process (1-3). These particles range in size from 0.1 to 1.0 microns and contain nuclear, cytoplasmic and membrane components. As shown in in vitro and in vivo experiments, MPs have diverse biological functions and can mediate inflammation, thrombosis and information exchange between cells among other activities. As such, MPs may play an important role in physiological and pathophysiological settings (4-8). Furthermore, MPs can serve as biomarkers of disease pathogenesis, with their levels in blood reflecting events in a wide range of tissue (9).
While the function of blebbing is not fully known, this process may regulate the surface to volume ratio of cells as they shrink during death. Like the formation of apoptotic bodies, blebbing may facilitate the clearance of material from dead and dying cells (10-12). Nevertheless, despite the close link between blebbing and apoptosis, cell activation can also lead to particle generation. For immune and other hematopoietic cells, however, the distinction between activation and death can be difficult because of the occurrence of activation-induced cell death. Among triggers for activation, LPS and other ligands of the toll-like receptors (TLRs) can induce apoptosis or pyroptosis of macrophages among other cell types, with cell death likely a mechanism for host defense to limit intracellular infection (13-15).
In a previous study, we assessed the mechanisms of MP release during the activation of macrophages by TLR ligands (16). These studies demonstrated that both LPS and poly (I:C) can induce MP production as assessed by flow cytometry. This release depended on nitric oxide (NO) and could be blocked by inhibitors of inducible nitric oxide synthase (iNOS). The MPs arising during TLR stimulation bound annexin V and, by flow cytometry, showed a size distribution consistent with particles from other sources.
While TLR ligands can potently induce macrophage activation, previous studies with RAW 264.7 cells indicated a significant increase in apoptosis in the stimulated cultures (16). Furthermore, inhibition of caspases by the caspase inhibitor Z-VAD-FMK caused an increase in the number of MPs from RAW 264.7 cells undergoing activation. This agent can cause a paradoxical increase in cell death because of its effects on the NUR77 orphan receptor which undergoes cleavage by a caspase-like enzyme. With this enzyme blocked, necrosis ensues (17-18). These results support a close link between activation induced by TLR stimulation and cell death and the role of regulatory systems in determining this balance.
Among their constituents, MPs contain nucleic acids, both DNA and RNA, as demonstrated by biochemical assays as well as staining of particles with antinuclear antibodies (19-20). While translocation of DNA into blebs is the likely source of this molecule in MPs from apoptotic cells, RNA may arise from the cytoplasm as the bleb forms. In contrast, the source of DNA in MPs arising during cell activation is less clear unless stimulation of TLRs or other receptors caused cell death; in this circumstance, the generation of blebs would resemble that occurring during classical apoptosis. Elucidating the nature of this DNA is important in determining mechanisms for MP release and the generation of extracellular DNA and its functional and antigenic properties.
In the current experiments, we have characterized the properties of MPs released by RAW 264.7 cells undergoing activation by LPS or poly (I:C), or apoptosis with etoposide or STS. We have analyzed the DNA and RNA content using biochemical assays and assessed the antigenicity of the DNA and associated nucleosomal molecules by flow cytometry. As results of these studies show, MPs from both activated and apoptotic cells contain DNA and RNA, with the DNA accessible to binding by antibodies. These results suggest that particle release during macrophage activation may result from cell death, emphasizing the link between activation and cell death and the role of TLR stimulation in inducing the production of extracellular DNA.
Materials and Methods
Cell culture
RAW 264.7 cells were obtained from ATCC (American Type Culture Collection, Manassas, VA) and were maintained in RPMI 1640 medium (Invitrogen Life Technologies, New York, NY) supplemented with 10% fetal bovine serum (FBS, Atlanta Biologicals, Lawrenceville, GA) and 20 μg/ml gentamicin (Invitrogen Life Technologies) at 37°C, 5% CO2. Approximately every 2-3 days, cells were sub-cultured upon reaching 80% confluence.
Analysis of microparticles by flow cytometry
Briefly, RAW 264.7 cells from a culture at 80% confluence were plated in RPMI 1640 medium supplemented with 10% FBS and 20 μg/ml gentamicin (complete media) at a density of 2.2×106/well of a 6-well plate. Cells were incubated for 20 h, after which they were washed twice with 1X phosphate buffered saline (PBS, calcium and magnesium-free, Invitrogen Life Technologies) and incubated in phenol red-free Optimem (Invitrogen Life Technologies). At this point, agents to induce activation or apoptosis were added yielding final concentrations of 30 μg/ml etoposide, 50 μg/ml LPS, 1μM STS (all purchased from Sigma-Aldrich, St. Louis, MO) or 250 ng/ml high molecular weight poly (I:C) (Invivogen, San Diego, CA). After 20-22 h, culture supernatants were removed by aspiration and centrifuged at 500xg for 5 min. The resulting supernatants were immediately assayed for MP quantity and phenotype. Alternatively, samples for lactate dehydrogenase (LDH) measurement and DNA content were stored at −20°C until assayed.
Samples were analyzed on the side scatter detection setting using a FACScan flow cytometer (Becton Dickinson, Mansfield, MA). The acquisition software used was FlowJo Collectors Edition (Tree Star, Ashland, OR). The samples were diluted with 1X PBS to produce solutions in which events were detected at a maximum rate of 1000 MPs per second. The dilutions ranged from 1:5 to 1:50 depending on MP concentration. By using pre-determined parameters, events above a minimum size threshold were collected. Data were collected until 10000 events were counted or one minute of counting had elapsed. Background events for buffer alone were subtracted and the counts/μl of sample was calculated using the recorded flow rate of the machine.
Samples were stained separately with SYTO 13 green fluorescent nucleic acid stain (Invitrogen Life Technologies), PI (Sigma-Aldrich) or FITC-labeled annexin V (BD Biosciences, Franklin Lakes, NJ). For each staining condition, 300 μl were prepared; all samples were diluted as described above, with samples stained with SYTO 13 or propidium iodide (PI) diluted in 1X PBS (calcium free, magnesium free and samples stained with FITC-labeled annexin V were diluted in annexin binding buffer (140mM NaCl, 10mM Hepes and 2.5mM CaCl2). For 300 μl of diluted sample, the following volumes of staining reagent were added: 6 μl of 5μM SYTO 13, 3 μl of 1 mg/ml PI and 3 μl of FITC-annexin V antibody solution. The data were analyzed using FlowJo analysis software.
Measurement of lactate dehydrogenase activity
The activity of LDH in culture supernatants was determined using the Cytotox96 Non-Radioactive Cytotoxicity Assay (Promega, Madison, WI). Supernatants were diluted 1:10 in 1X PBS (calcium free, magnesium free) and the assay was completed per kit instructions.
Quantitation of DNA release
The amount of double-stranded DNA released from activated or dying RAW 264.7 cells was measured using the Quant-iT PicoGreen dsDNA Reagent (PicoGreen) (Invitrogen Life Technologies). Briefly, the supernatants were diluted 1:5 with 1X TE (10mM Tris-HCl and 1mM ethylenediaminetetraacetic acid [EDTA], pH 8.0). Samples were incubated at a 1:1 ratio with the PicoGreen reagent diluted 1:200 in 1X TE in black 96-well plates (Greiner Bio-One, Kremsmunster, Austria) for 5 min. Fluorescence was measured using a Tecan GENios microplate reader (Saltzburg, Austria), with an excitation wavelength of 485nm and an emission wavelength of 535nm. Values were obtained as relative fluorescence units (RFU). The concentration of DNA (ng/ml) was calculated according to fluorescence values for a standard solution of double-stranded DNA from calf thymus (Worthington Biochemical Corporation, Lakewood, NJ).
Purification of RNA and DNA from microparticles
Briefly, actively growing RAW 264.7 cells were plated at a density of 2-3 × 106 cells per T175 tissue culture flask in complete medium and incubated overnight at 37°C, 5% CO2. Between one and three flasks per treatment were used depending on expected yields of MPs. After 18 h culture monolayers were rinsed twice with 1X PBS and then incubated in 25 ml/flask of phenol red-free Optimem (Invitrogen Life Technologies). Cells were then treated to induce MP production [50 μg/ml LPS, 250 ng/ml poly (I:C), 30 μg/ml etoposide or 1μM STS]. The treated cells were incubated 20-22h at 37°C, 5%CO2. The media was then removed from the cells and centrifuged twice at room temperature for 5 min at 500×g to remove any contaminating cells.
The cell-free supernatant was then passed through a 1.2 μm syringe filter (Pall Corporation, Cornwall, UK) to ensure removal of large contaminating material. MPs were then isolated from the filtered supernatant by ultracentrifugation at 10°C, 35,000 rpm for 25 min. The MP-containing pellets were re-suspended in cold 1X PBS and ultracentrifuged under the same conditions. Supernatants were carefully removed and the purified MPs were stored at −80°C. RNA and DNA were isolated from separate preparations of MPs. Following the thawing of the MP pellets, RNA and DNA were isolated using RNeasy mini kits (Qiagen, Valencia, CA) and Apoptotic DNA Ladder kits (Roche, Indianapolis, IN) respectively. The minimum recommended elution volumes were used to keep recovered RNA and apoptotic DNA concentrated for subsequent applications.
Nucleic acid purification and analysis
Isolated RNA was quantitated using Quant-iT Ribogreen RNA Reagent (Ribogreen reagent). Briefly, samples were prepared at a range of dilutions (1X TE). They were then incubated at a 1:1 ratio with a 1:200 dilution of Ribogreen reagent in a black 96-well plate. The incubation took place in the absence of light for5 min. The fluorescence produced was measured using a fluorescence plate reader (excitation 485nm, emission 535nm). Values were obtained as RFU. The RNA concentrations (ng/ml) were calculated according to fluorescence values for standard solutions made from ribosomal RNA (Roche, Indianapolis, IN). The samples were diluted to 2 ng/ml with DNAse- and RNAse-free water. The samples were submitted to the Duke University DNA Microarray Core Facility for analysis of RNA integrity using an Agilent Bioanalyzer (Picochip) using eukaryote total RNA detection settings.
DNA isolated from MPs was quantitated using PicoGreen reagent as described above. DNA electrophoresis was performed using a 1% agarose gel in 1X TAE stained with ethidium bromide. Equal amounts of DNA were loaded per lane. Images of gels stained with ethidium bromide were photographed with a digital imaging system from Alpha Innotech (San Leandro, CA).
MP binding of anti-DNA and anti-histone antibodies
MPs released from activated or dying RAW 264.7 cells were purified using the same method described above, although cell numbers and culture size were reduced because the number of MPs required was much lower than those needed for RNA and DNA extraction experiments. After purification, MPs were re-suspended in 200 μl 1X PBS (calcium free, magnesium free). MP numbers were then determined by flow cytometry (as described above). Potential Fc receptor sites on the MPs were blocked by incubating the MPs with a rat anti-mouse CD16/CD32 (BD Bioscience) at a concentration of 0.5 μg/300,000 MPs for 15 min on ice. MPs were aliquoted into FACS tubes at a concentration of 50,000 per tube. The MPs were stained with monoclonal antibodies that recognize DNA (QB1 and PL9-11), nucleosomes (PR1-3 and PA1), or isotype controls for 1 h at room temperature, followed by a F(ab')2 sheep anti-mouse IgG PE (Sigma) (1 h, room temperature, in the dark). The samples were then analyzed by flow cytometry.
Statistical Analysis
A two tailed, Students t-test analysis was used to analyze data between different treatment conditions. A value of P<0.05 was considered significant.
Results
As a model for generating MPs by macrophages, RAW 264.7 cell were used, treating cells with LPS or poly (I:C) to activate TLR4 and TLR3 respectively, or with etoposide or STS to induce apoptosis under conditions previously used to assess MP generation by these cells (16,19). In these experiments, we stimulated cultures with LPS at a concentration of 50 μg/ml based on previous studies experiments showing that MP production stimulation by LPS was dose-dependent, with a concentration of 50 μg/ml leading to the highest number of particles (16). Following incubation with the various stimulants, culture supernatants were obtained and analyzed for MPs. LDH and DNA were assessed as a measure of cell death. The number of microparticles was determined by flow cytometry. As shown in Figure 1, irrespective of source, particles showed a similar pattern when assessed by forward scatter and side scatter.
As data shown in Figure 2 indicates, treatment of RAW 264.7 cells to induce activation or apoptosis led to an increase in MP numbers although the extent varied. Thus, treatment with STS, a protein kinase inhibitor with broad activity, led to much greater MP release than any of the other treatments. In addition, STS caused more extensive release of both DNA and LDH than other treatments, consistent with greater efficacy in inducing apoptosis; these findings do not exclude the possibility that the increase in particles may result from a more direct effect on blebbing or particle release that may not depend on apoptosis.
The phenotype of particles from treated and untreated cultures was next analyzed by flow cytometry, assessing annexin V binding as an indicator of the exposure of phosphatidylserine during membrane “flipping”, which can be a feature of apoptosis although it may also occur with certain viable cell populations (21,22). As results presented in Figure 3 indicate, particles treated with etoposide, LPS or poly (I:C) showed similar staining with annexin V as did particles from untreated cultures. The origin of particles in control cultures is difficult to determine, however, since cultures invariably have cells undergoing apoptosis (data not shown). Thus, the control particles may in fact represent particles from apoptotic cells.
As shown previously in studies of particles from Jurkat T cells and other lymphoid cells undergoing apoptosis, particles can contain both DNA and RNA as demonstrated by biochemical assays as well as flow cytometry dyes SYTO 13 and PI which bind nucleic acids (19). SYTO 13 can permeate particles irrespective of membrane permeability, while PI enters only those MPs whose membranes are permeable. Figure 4 presents data on the staining of MPs with either SYTO 13 or PI. As these data indicate, MPs stained with SYTO 13 or PI irrespective of source, although there were differences in levels of staining among cell treatments. These differences could relate to MP membrane permeability or the distribution of DNA on the inside or outside of MPs.
The RNA and content of particles was next analyzed biochemically. Figure 5 presents results of molecular weight determinations of RNA and its integrity as assayed by gel electrophoresis. As results of these studies show, RNA from cells treated with STS differed dramatically from RNA from other particles from either control cultures or cultures treated with LPS, poly (I:C) or etoposide. Thus, the RNA in the particles from STS-treated cultures showed cleavage and degradation, with loss of distinct bands for 18 and 28 ribosomal RNA species. In contrast, the RNA from the other cultures showed much less degradation, with distinct bands for 18 and 28 S ribosomal RNA species.
To characterize further the nature of the nucleic acids in particles, we analyzed DNA by gel electrophoresis using preparations isolated using an apoptotic DNA laddering kit. As demonstrated in Figure 6, the preparations from MPs from all conditions were similar, with isolated DNA from all showing evidence of lower molecular species and laddering. We next analyzed the DNA content of MPs by flow cytometry using monoclonal antibodies that bind to particles from apoptotic cells (19,20). Figure 7 presents these results. As these studies indicate, the monoclonal antibodies bound to MPs, independent of source, although particles from STS-treated cultures showed higher levels of staining with antibodies QB1 and PAI. These results confirm findings that MPs can display DNA and related nucleosomal molecules in a form accessible to antibody binding (19,20). Taken together with other results, these studies indicate that stimulation of TLRs can elicit particles that are structurally and antigenically similar to those from apoptotic cells.
Discussion
Results of these studies provide new insight into the properties of MPs from macrophages. Thus, our studies show that the nucleic acids in MPs from RAW 264.7 cells activated with TLR ligands [LPS and poly (I:C)] resemble those of MPs from apoptotic as well as untreated cells. Furthermore, MPs, irrespective of origin, bound monoclonal anti-DNA and related anti-nucleosomal antibodies, indicating antigenicity and accessibility of nucleic acids to antibodies. Since the release of extracellular DNA, in a free or particulate form occurs prominently during cell death (23-25), these findings suggest that MPs released from cells treated with TLR ligands may result from cells undergoing apoptosis during this form of activation. Similarly, MPs from untreated cells may result from apoptosis that occurs during culture of cell lines in vitro.
The translocation of nuclear molecules into blebs is one of the most distinctive features of apoptosis (26-28). While the detailed trafficking of DNA from the nucleus into the cytoplasm has not been defined, blebbing, which leads to MP release, may have an immunological function by compacting DNA into a subcellular structure to promote phagocytosis. This function would be similar to that proposed for apoptotic bodies. Apoptotic bodies are larger than MPs and represent the collapsed remnants of apoptotic cells (29). The boundary between MPs and apoptotic bodies is not that distinct, however, with size (greater than or less than 1 μm) an important basis of characterization.
The present study extends prior investigations and demonstrates clearly that MPs can contain DNA as evidenced by biochemical and immunochemical assays as well as gel electrophoresis (19). The simplest explanation for this finding relates to the role of LPS and other TLR ligands in inducing cell death. As now recognized, cell death can play an important role in host defense by preventing replication of intracellular organisms and, at the same time, releasing signaling elements (e.g., alarmins and microparticles) which can activate other cell types to increase antiviral or anti-bacterial activity (30-33). This type of death is regulated and programmed, with the immunological outcome determined by downstream pathways induced, including the role of different caspases as well as extent of cell lysis. Cell death resulting from stimulation of TLR or non-TLR receptors or inflammasome activation may be considered as pyroptosis to signify the subsequent immune stimulation (34,35). This stimulation can result from molecules such as HMGB1 or structures such as microparticles.
In in vitro culture systems, it can be difficult to distinguish the relative contributions of cell death and cell activation in the production of MPs in response to TLR stimulation. As we have shown previously, stimulation of particle production by RAW264.7 cells by LPS is time and dose-dependent, with the highest number of particles generated at 50 μg/ml, the concentration of LPS used in these experiments (16). In other studies, we have shown that even lower concentrations of LPS can lead to apoptosis although, under these circumstances, the number of particles is much lower as is the production of other inflammatory mediators such as nitric oxide (36). Given the close association of TLR activation and cell death (apoptosis or pyroptosis), determining the origin of a particle from an activated or dying cell in a culture may not be possible.
In view of the potential mechanisms for MP generation, the DNA contained in MPs is most likely nuclear in origin although mitochondrial DNA may also be present. Mitochondrial DNA is structurally similar to bacterial DNA and, as such, differs from nuclear DNA in its intrinsic immunological activity (37-40). While mitochondria are likely components of MPs, we have not specifically evaluated the content of our particle preparations. In this regard, studies conducted in a variety of species have suggested the existence of another form of DNA called metabolic DNA or the virtosome; this type of DNA may be expendable for the cell and therefore can undergo translocation into the extracellular space without consequences for cell viability (41). The conditions for the generation and export of metabolic DNA are not well defined, however.
While our studies demonstrate that macrophage MPs contain DNA and related nuclear molecules, the composition of MPs may be heterogeneous and vary depending on their cell of origin or inducing condition. For example, studies have shown that MPs from endothelial cells undergoing stress-induced apoptosis lack DNA and histones as well as immunostimulatory activity. In contrast larger structures released from endothelial cells (i.e., apoptotic bodies) contain the nuclear molecules and have pro-inflammatory active related to expression of IL-1α (42). These findings suggest that both the translocation of nuclear and the formation of either blebs or apoptotic bodies may reflect cell-specific process that in turn impacts on any subsequent immunes responses.
In addition to their content of DNA, MPs contain RNA of various kinds including ribosomal RNA (rRNA), messenger RNA (mRNA) and microRNA (miRNA). The presence of mRNA and miRNA has suggested a role of MPs in intracellular communication by transfer of informational RNA. Our previous studies showed that rRNA from particles obtained from Jurkat and HL-60 cells undergoing apoptosis induced by STS, UV treatment or camptothecin showed significant degradation (19). In addition, we showed that MP rRNA differed from that in the apoptotic cells in the extent of the cleavage. These findings suggested either selective incorporation of degraded RNA into particles or distinct patterns of RNA degradation in the particles compared to cells. As in studies by others, cleavage of rRNA can be a feature of apoptotic death (43-46).
The results of the current study indicate differences in the pattern of RNA degradation of the particles from RAW 264.7 cells depending on the inducing stimulus. Whereas particles from cells treated with STS showed extensive RNA degradation, RNA from particles from cells treated with either LPS, poly (I:C) or etoposide showed much more intact RNA, with clear bands expected for 28S and 18S species visible. The differences in the patterns of rRNA integrity could result from the kinetics and extent of cell death depending on inducing agent; in our experiments, STS led to the highest level of cell death as shown by the extent of LDH production and can induce cell death rapidly (preliminary observations). The pattern of RNA degradation may relate toanother action of STS in RAW 264.7 cells that is not directly related to apoptosis. Staurosporine is a broad spectrum kinase inhibitor and can also affect blebbing among many other processes (47).
Among their other properties, MPs display nuclear antigens that can serve as a target of autoantibodies in the setting of systemic lupus erythematosus, a prototypic autoimmune disease characterized by immune complex formation (20,48). In our previous studies, we showed that monoclonal antibodies to DNA and other nucleosomal antigens can bind to particles from apoptotic cells and that particles from patients with lupus can have bound IgG, indicative of immune complex formation (20). Our current studies indicate that particles from activated cells are also autoantigenic. Thus, in the setting of autoimmune disease, the presence of particles with bound IgG is consistent with either an event (e.g., ischemia, UV damage) that leads primarily to apoptosis or an event resulting from intense immune activation or sterile inflammation. Since the particles resulting from these processes can have similar properties, it may be difficult to distinguish proximal events leading to their production. Future studies will determine whether the functional properties of the particles vary depending on mode of induction and content of other bioactive molecules.
Acknowledgments
This work was supported by a VA Merit Review Grant, a grant from Alliance for Lupus Research (ALR), and NIH 5U19-AI056363.
References
- 1.Beyer C, Pisetsky DS. The role of microparticles in the pathogenesis of rheumatic diseases. Nat Rev Rheumatol. 2010;6:21–29. doi: 10.1038/nrrheum.2009.229. [DOI] [PubMed] [Google Scholar]
- 2.Anderson HC, Mulhall D, Garimella R. Role of extracellular membrane vesicles in the pathogenesis of various diseases, including cancer, renal diseases, atherosclerosis, and arthritis. Lab Invest. 2010;90:1549–1557. doi: 10.1038/labinvest.2010.152. [DOI] [PubMed] [Google Scholar]
- 3.György B, Szabó TG, Pásztói M, et al. Membrane vesicles, current state-of-the art: emerging role of extracellular vesicles. Cell Mol Life Sci. 2011;68:2667–2688. doi: 10.1007/s00018-011-0689-3. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 4.Hoyer FF, Giesen MK, Franca C, et al. Monocytic microparticles promote atherogenesis by modulating inflammatory cells in mice. J Cell Mol Med. doi: 10.1111/j.1582-4934.2012.01595.x. Epub ahead of print 14 June 2012. DOI: 10.1111/j.1582-4934.2012.01595.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 5.Prakash PS, Caldwell CC, Lentsch AB, et al. Human microparticles generated during sepsis in patients with critical illness are neutrophil-derived and modulate the immune response. J Trauma Acute Care Surg. 2012;73:401–407. doi: 10.1097/TA.0b013e31825a776d. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6.Mastronardi ML, Mostefai HA, Meziani F, et al. Circulating microparticles from septic shock patients exert differential tissue expression of enzymes related to inflammation and oxidative stress. Crit Care Med. 2011;39:1739–1748. doi: 10.1097/CCM.0b013e3182190b4b. [DOI] [PubMed] [Google Scholar]
- 7.Frieta D, Ochoa CE, Kramer HB, et al. HIV-1 infection-induced apoptotic microparticles inhibit human DCs via CD44. J Clin Invest. 2012;122:4685–4697. doi: 10.1172/JCI64439. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 8.Angelillo-Scherrer A. Leukocyte-derived microparticles in vascular homeostasis. Circ Res. 2012;110:356–369. doi: 10.1161/CIRCRESAHA.110.233403. [DOI] [PubMed] [Google Scholar]
- 9.Pisetsky DS, Ullal AJ, Gauley J, et al. Microparticles as mediators and biomarkers of rheumatic disease. Rheumatology (Oxford) doi: 10.1093/rheumatology/kes028. Epub ahead of print 7 March 2012. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 10.Charras GT. A short history of blebbing. J Microsc. 2008;231:466–478. doi: 10.1111/j.1365-2818.2008.02059.x. [DOI] [PubMed] [Google Scholar]
- 11.Charras GT, Coughlin M, Mitchison TJ, et al. Life and times of a cellular bleb. Biophys J. 2008;94:1836–1853. doi: 10.1529/biophysj.107.113605. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 12.Núñez R, Sancho-Martínez SM, Novoa JML, et al. Apoptotic volume decrease as a geometric determinant for cell dismantling into apoptotic bodies. Cell Death Differ. 2010;17:1665–1671. doi: 10.1038/cdd.2010.96. [DOI] [PubMed] [Google Scholar]
- 13.Salaun B, Romero P, Lebecque S. Toll-like receptors’ two-edged sword: when immunity meets apoptosis. Eur J Immunol. 2007;37:3311–3318. doi: 10.1002/eji.200737744. [DOI] [PubMed] [Google Scholar]
- 14.Labbé K, Saleh M. Cell death in the host response to infection. Cell Death Differ. 2008;15:1339–1349. doi: 10.1038/cdd.2008.91. [DOI] [PubMed] [Google Scholar]
- 15.Bortoluci KR, Medzhitov R. Control of infection by pyroptosis and autophagy: role of TLR and NLR. Cell Mol Life Sci. 2010;67:1643–1651. doi: 10.1007/s00018-010-0335-5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16.Gauley J, Pisetsky DS. The release of microparticles by RAW 264.7 macrophage cells stimulated with TLR ligands. J Leukoc Biol. 2010;87:1115–1123. doi: 10.1189/jlb.0709465. [DOI] [PubMed] [Google Scholar]
- 17.Xu Y, Kim SO, Li Y, et al. Autophagy contributes to caspase-independent macrophage cell death. J Biol Chem. 2006;281:19179–19187. doi: 10.1074/jbc.M513377200. [DOI] [PubMed] [Google Scholar]
- 18.Vandenabeele P, Berghe TV, Festjens N. Caspase inhibitors promote alternative cell death pathways. Sci STKE. 2006;2006:pe44. doi: 10.1126/stke.3582006pe44. [DOI] [PubMed] [Google Scholar]
- 19.Reich CF, 3rd, Pisetsky DS. The content of DNA and RNA in microparticles released by Jurkat and HL-60 cells undergoing in vitro apoptosis. Exp Cell Res. 2009;315:760–768. doi: 10.1016/j.yexcr.2008.12.014. [DOI] [PubMed] [Google Scholar]
- 20.Ullal AJ, Reich CF, 3rd, Clowse M, et al. Microparticles as antigenic targets of antibodies to DNA and nucleosomes in systemic lupus erythematosus. J Autoimmun. 2011;36:173–180. doi: 10.1016/j.jaut.2011.02.001. [DOI] [PubMed] [Google Scholar]
- 21.Dillon SR, Mancini M, Rosen A, et al. Annexin V binds to viable B cells and colocalizes with a marker of lipid rafts upon B cell receptor activation. J Immunol. 2000;164:1322–1332. doi: 10.4049/jimmunol.164.3.1322. [DOI] [PubMed] [Google Scholar]
- 22.Appelt U, Sheriff A, Gaipl US, et al. Viable, apoptotic and necrotic monocytes expose phosphatidylserine: cooperative binding of the ligand Annexin V to dying but not viable cells and implications for PS-dependent clearance. Cell Death Differ. 2005;12:194–196. doi: 10.1038/sj.cdd.4401527. [DOI] [PubMed] [Google Scholar]
- 23.Jiang N, Reich CF, 3rd, Monestier M, et al. The expression of plasma nucleosomes in mice undergoing in vivo apoptosis. Clin Immunol. 2003;106:139–147. doi: 10.1016/s1521-6616(02)00027-x. [DOI] [PubMed] [Google Scholar]
- 24.Tran TT, Groben P, Pisetsky DS. The release of DNA into the plasma of mice following hepatic cell death by apoptosis and necrosis. Biomarkers. 2008;13:184–200. doi: 10.1080/13547500701791719. [DOI] [PubMed] [Google Scholar]
- 25.Schwarzenbach H, Hoon DSB, Pantel K. Cell-free nucleic acids as biomarkers in cancer patients. Nat Rev Cancer. 2011;11:426–437. doi: 10.1038/nrc3066. [DOI] [PubMed] [Google Scholar]
- 26.Lane JD, Allan VJ, Woodman PG. Active relocation of chromatin and endoplasmic reticulum into blebs in late apoptotic cells. J Cell Sci. 2005;118:4059–4071. doi: 10.1242/jcs.02529. [DOI] [PubMed] [Google Scholar]
- 27.Schiller M, Bekeredjian-Ding I, Heyder P, et al. Autoantigens are translocated into small apoptotic bodies during early stages of apoptosis. Cell Death Differ. 2008;15:183–191. doi: 10.1038/sj.cdd.4402239. [DOI] [PubMed] [Google Scholar]
- 28.Rosen A. Apoptotic cell blebs: repositories of autoantigens and contributors to immune context. Arthritis Rheum. 2009;60:2216–2219. doi: 10.1002/art.24715. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 29.Ihara T, Yamamoto T, Sugamata M, et al. The process of ultrastructural changes from nuclei to apoptotic body. Virchows Arch. 1998;433:443–447. doi: 10.1007/s004280050272. [DOI] [PubMed] [Google Scholar]
- 30.Galluzzi L, Kroemer G. Necroptosis: a specialized pathway of programmed necrosis. Cell. 2008;135:1161–1163. doi: 10.1016/j.cell.2008.12.004. [DOI] [PubMed] [Google Scholar]
- 31.Webster SJ, Daigneault M, Bewley MA, et al. Distinct cell death programs in monocytes regulate innate responses following challenge with common causes of invasive bacterial disease. J Immunol. 2010;185:2968–2979. doi: 10.4049/jimmunol.1000805. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 32.Bergsbaken T, Cookson BT. Macrophage activation redirects Yersinia-infected host cell death from apoptosis to caspase-1-dependent pyroptosis. PLoS Pathog. 2007;3:1570–1582. doi: 10.1371/journal.ppat.0030161. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 33.Vanlangenakker N, Berghe TV, Vandenabeele P. Many stimuli pull the necrotic trigger, an overview. Cell Death Differ. 2012;19:75–86. doi: 10.1038/cdd.2011.164. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 34.Miao EA, Leaf IA, Treuting PM, et al. Caspase-1-induced pyroptosis is an innate immune effector mechanism against intracellular bacteria. Nature Immunol. 2010;11:1136–1143. doi: 10.1038/ni.1960. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 35.Miao EA, Rajan JV, Aderem A. Caspase-1-induced pyroptotic cell death. Immunol Rev. 2011;243:206–214. doi: 10.1111/j.1600-065X.2011.01044.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 36.Jiang W, Bell CW, Pisetsky DS. The relationship between apoptosis and high-mobility group protein 1 release from murine macrophages stimulated with lipopolysaccharide or polyinosinic-polycytidylic acid. J Immunol. 2007;178:6495–6503. doi: 10.4049/jimmunol.178.10.6495. [DOI] [PubMed] [Google Scholar]
- 37.Pollack Y, Kasir J, Shemer R, et al. Methylation pattern of mouse mitochondrial DNA. Nucleic Acids Res. 1984;12:4811–4824. doi: 10.1093/nar/12.12.4811. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 38.Collins LV, Hajizadeh S, Holme E, et al. Endogenously oxidized mitochondrial DNA induces in vivo and in vitro inflammatory responses. J Leukoc Biol. 2004;75:995–1000. doi: 10.1189/jlb.0703328. [DOI] [PubMed] [Google Scholar]
- 39.Zhang Q, Raoof M, Chen Y, et al. Circulating mitochondrial DAMPs cause inflammatory responses to injury. Nature. 2010;464:104–107. doi: 10.1038/nature08780. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 40.Oka T, Hikoso S, Yamaguchi O, et al. Mitochondrial DNA that escapes from autophagy causes inflammation and heart failure. Nature. 2012;485:251–256. doi: 10.1038/nature10992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 41.Gahan PB, Stroun M. The virtosome-a novel cytosolic informative entity and intercellular messenger. Cell Biochem Funct. 2010;28:529–538. doi: 10.1002/cbf.1690. [DOI] [PubMed] [Google Scholar]
- 42.Berda-Haddad Y, Robert S, Salers P, et al. Sterile inflammation of endothelial cell-derived apoptotic bodies is mediated by interleukin-1α. Proc Natl Acad Sci U S A. 2011;108:20684–20689. doi: 10.1073/pnas.1116848108. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 43.Houge G, Robaye B, Eikhom TS, et al. Fine mapping of 28S rRNA sites specifically cleaved in cells undergoing apoptosis. Mol Cell Biol. 1995;15:2051–2062. doi: 10.1128/mcb.15.4.2051. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 44.Samali A, Gilje B, Døskeland SO, et al. The ability to cleave 28S ribosomal RNA during apoptosis is a cell-type dependent trait unrelated to DNA fragmentation. Cell Death Differ. 1997;4:289–293. doi: 10.1038/sj.cdd.4400246. [DOI] [PubMed] [Google Scholar]
- 45.King KL, Jewell CM, Bortner CD, et al. 28S ribosome degradation in lymphoid cell apoptosis: evidence for caspase and Bcl-2-dependent and –independent pathways. Cell Death Differ. 2000;7:994–1001. doi: 10.1038/sj.cdd.4400731. [DOI] [PubMed] [Google Scholar]
- 46.Mroczek S, Kufel J. Apoptotic signals induce specific degradation of ribosomal RNA in yeast. Nucleic Acids Res. 2008;36:2874–2888. doi: 10.1093/nar/gkm1100. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 47.Hagmann J, Burger MM, Dagan D. Regulation of plasma membrane blebbing by the cytoskeleton. J Cell Biochem. 1999;73:488–499. [PubMed] [Google Scholar]
- 48.Nielsen CT, Østergaard O, Stener L, et al. Increased IgG on cell-derived plasma microparticles in systemic lupus erythematosus is associated with autoantibodies and complement activation. Arthritis Rheum. 2012;64:1227–1236. doi: 10.1002/art.34381. [DOI] [PubMed] [Google Scholar]