Table 1.
Loop length | Number of structures | BLOSUM40 | RF |
---|---|---|---|
Very short (4–6 residues) | 40 | 1.6 | 1.3 |
Short (7–9 residues) | 117 | 3.0 | 1.7 |
Medium (10–11 residues) | 114 | 3.2 | 2.0 |
Long (12–14 residues) | 94 | 3.6 | 3.5 |
Very long (>17 residues) | 24 | 5.8 | 4.3 |
Mean RMSD | 3.3 | 2.7 | |
Median RMSD | 2.4 | 1.8 |
The values in columns 3 and 4 are the average backbone RMSD (in Å) between the target and the selected best template loop.