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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2014 Aug 9;70(Pt 9):o981–o982. doi: 10.1107/S1600536814017826

Crystal structure of cis-1-(2-methyl-1,2,3,4-tetra­hydro­quinolin-4-yl)azepan-2-one

P S Pradeep a, S Naveen b, M N Kumara c, K M Mahadevan a, N K Lokanath d,*
PMCID: PMC4186183  PMID: 25309292

Abstract

In the title compound, C16H22N2O, the azepan-2-one ring adopts a chair conformation, while the 1,2,3,4-tetra­hydro­pyridine ring adopts a half-chair conformation. In the crystal, mol­ecules are linked by N—H⋯O hydrogen bonds, forming supra­molecular chains propagated along [10-1], with weak C—H⋯O inter­actions occurring between the chains.

Keywords: crystal structure, tetra­hydro­quinolines, azepan-2-one, hydrogen bonding

Related literature  

For applications of tetra­hydro­quinolines, see: Konishi et al. (1990).graphic file with name e-70-0o981-scheme1.jpg

Experimental  

Crystal data  

  • C16H22N2O

  • M r = 258.36

  • Monoclinic, Inline graphic

  • a = 9.1640 (17) Å

  • b = 13.1687 (18) Å

  • c = 11.988 (2) Å

  • β = 96.825 (11)°

  • V = 1436.4 (4) Å3

  • Z = 4

  • Cu Kα radiation

  • μ = 0.59 mm−1

  • T = 296 K

  • 0.23 × 0.22 × 0.21 mm

Data collection  

  • Bruker X8 Proteum diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2013) T min = 0.874, T max = 0.884

  • 7903 measured reflections

  • 2343 independent reflections

  • 2106 reflections with I > 2σ(I)

  • R int = 0.028

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.049

  • wR(F 2) = 0.139

  • S = 1.06

  • 2343 reflections

  • 173 parameters

  • H-atom parameters constrained

  • Δρmax = 0.34 e Å−3

  • Δρmin = −0.36 e Å−3

Data collection: APEX2 (Bruker, 2013); cell refinement: SAINT (Bruker, 2013); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: Mercury.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814017826/xu5808sup1.cif

e-70-0o981-sup1.cif (25.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814017826/xu5808Isup2.hkl

e-70-0o981-Isup2.hkl (115.2KB, hkl)

Supporting information file. DOI: 10.1107/S1600536814017826/xu5808Isup3.cml

. DOI: 10.1107/S1600536814017826/xu5808fig1.tif

A view of the title mol­ecule, with atom labelling. Displacement ellipsoids are drawn at the 50% probability level.

a . DOI: 10.1107/S1600536814017826/xu5808fig2.tif

A viewed along the a axis of the crystal packing of the title compound.

CCDC reference: 1017682

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯O19i 0.86 2.40 2.988 (2) 126
C14—H14A⋯O19ii 0.97 2.57 3.320 (2) 134

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors are thankful to IOE, Vijnana Bhavana, University of Mysore, Mysore, for providing the single-crystal X-ray diffractometer facility.

supplementary crystallographic information

S1. Comment

Tetrahydroquinolines are an important family of heterocyclic compounds having wide range of biological activities which includes antimalarial, antitumoral, antioxidant, etc. In particular 2-Methyl-1,2,3,4-tetrahydroquinoline is present in human brain and a natural antitumor antibiotic, has a complex structure built on the tetrahydroquinoline system (Konishi et al., 1990). Hence, in continuation of our effort to identify new quinoline based therapeutic agents, the title compound has been synthesized and herein we report its crystal structure.

The ORTEP of the molecule is shown in figure 1. The title compound is chiral. In the arbitrarily chosen asymmetric molecule, C2 has S configuration whereas C4 has R configuration. The azepan ring lies in the equatorial plane of the fused rings as indicated by the dihedral angle value of 66.28 (8)°. A study of torsion angles, asymmetric parameters and least squares plane calculations reveals that the quinoline ring in the structure adopts a half chair conformation with the atom C3 deviating by 0.3278 (18) Å from the least-squares plane defined by the atoms N1/C2/C3/C4/C5/C10. This is confirmed by the puckering amplitude Q = 0.4857 (18) Å. The structure exhibits weak intermolecular hydrogen bonds of the type C—H···O and N—H···O. The packing of the molecules when viewed along the a axis indicate that they are stacked in pairs.

S2. Experimental

A catalytic amount of SbF3 (10 mol %) was added to the mixture of aniline(1 equivalent) and N-vinyl caprolactam(2–3 equivalent) in acetonitrile (5–10 ml). The reaction mixture was stirred at ambient temperature (~25 °C) for 20–70 min. The reaction was monitored by TLC by using ethyl acetate/hexane as eluent. After the completion of the reaction, the solvent was removed under vacuo. The crude product was then quenched with water and the catalyst was decomposed by addition of appropriate amount of sodium bicarbonate solution, extracted with ethyl acetate (10 ml × 5 times), dried and was purified by column chromatography using ethyl acetate/hexane as eluent (pet ether/ethyl acetate 80:20 v/v). The white solid crystals were obtained by slow evaporation method by using petroleum ether: ethyl acetate, 8:2 v/v as solvents. M.P. = 155–160 °C. Yield: 93%.

S3. Refinement

The hydrogen atoms were placed geometrically with N—H = 0.86, C—H = 0.93–0.98 Å, and allowed to ride on their parent atoms with Uiso(H) = 1.5Ueq(C) for the methyl H atoms and 1.2Ueq(N,C) for the others.

Figures

Fig. 1.

Fig. 1.

A view of the title molecule, with atom labelling. Displacement ellipsoids are drawn at the 50% probability level.

Fig. 2.

Fig. 2.

A viewed along the a axis of the crystal packing of the title compound.

Crystal data

C16H22N2O F(000) = 560
Mr = 258.36 Dx = 1.195 Mg m3
Monoclinic, P21/n Cu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2yn Cell parameters from 2343 reflections
a = 9.1640 (17) Å θ = 6.7–64.8°
b = 13.1687 (18) Å µ = 0.59 mm1
c = 11.988 (2) Å T = 296 K
β = 96.825 (11)° Block, colorless
V = 1436.4 (4) Å3 0.23 × 0.22 × 0.21 mm
Z = 4

Data collection

Bruker X8 Proteum diffractometer 2343 independent reflections
Radiation source: Bruker MicroStar microfocus rotating anode 2106 reflections with I > 2σ(I)
Helios multilayer optics monochromator Rint = 0.028
Detector resolution: 18.4 pixels mm-1 θmax = 64.8°, θmin = 6.7°
φ and ω scans h = −10→10
Absorption correction: multi-scan (SADABS; Bruker, 2013) k = −15→4
Tmin = 0.874, Tmax = 0.884 l = −14→13
7903 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139 H-atom parameters constrained
S = 1.06 w = 1/[σ2(Fo2) + (0.0671P)2 + 0.4283P] where P = (Fo2 + 2Fc2)/3
2343 reflections (Δ/σ)max < 0.001
173 parameters Δρmax = 0.34 e Å3
0 restraints Δρmin = −0.36 e Å3

Special details

Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O19 0.20029 (15) 0.75502 (10) 0.32245 (11) 0.0661 (5)
N1 0.53573 (16) 0.85016 (11) −0.01036 (12) 0.0538 (5)
N12 0.28345 (14) 0.90157 (10) 0.25474 (10) 0.0438 (4)
C2 0.60480 (18) 0.82217 (14) 0.10008 (15) 0.0511 (6)
C3 0.52791 (17) 0.87701 (14) 0.18769 (14) 0.0497 (5)
C4 0.36664 (17) 0.84597 (12) 0.17675 (13) 0.0421 (5)
C5 0.29631 (17) 0.85491 (12) 0.05626 (13) 0.0439 (5)
C6 0.1450 (2) 0.86076 (16) 0.03030 (16) 0.0593 (6)
C7 0.0790 (2) 0.86425 (19) −0.07861 (17) 0.0718 (8)
C8 0.1649 (3) 0.86264 (17) −0.16454 (16) 0.0700 (7)
C9 0.3153 (2) 0.85678 (14) −0.14226 (15) 0.0605 (7)
C10 0.38380 (19) 0.85289 (12) −0.03180 (14) 0.0459 (5)
C11 0.7676 (2) 0.84612 (19) 0.1097 (2) 0.0743 (8)
C13 0.28372 (19) 1.01269 (13) 0.25122 (14) 0.0514 (6)
C14 0.3621 (2) 1.06237 (15) 0.35552 (17) 0.0640 (7)
C15 0.2718 (3) 1.06735 (17) 0.45383 (18) 0.0770 (8)
C16 0.2169 (3) 0.96542 (17) 0.49058 (17) 0.0720 (8)
C17 0.1190 (2) 0.90829 (16) 0.40028 (17) 0.0627 (7)
C18 0.20364 (18) 0.84820 (14) 0.32180 (13) 0.0486 (6)
H1 0.58880 0.86510 −0.06260 0.0640*
H2 0.59290 0.74890 0.10990 0.0610*
H3A 0.53550 0.94980 0.17750 0.0600*
H3B 0.57490 0.86010 0.26220 0.0600*
H4 0.36380 0.77400 0.19710 0.0510*
H6 0.08640 0.86240 0.08850 0.0710*
H7 −0.02280 0.86770 −0.09380 0.0860*
H8 0.12120 0.86550 −0.23860 0.0840*
H9 0.37220 0.85540 −0.20150 0.0730*
H11A 0.81160 0.80920 0.05330 0.1120*
H11B 0.81330 0.82670 0.18280 0.1120*
H11C 0.78080 0.91760 0.09920 0.1120*
H13A 0.18280 1.03640 0.24060 0.0620*
H13B 0.33020 1.03440 0.18670 0.0620*
H14A 0.38960 1.13080 0.33670 0.0770*
H14B 0.45190 1.02500 0.37870 0.0770*
H15A 0.33110 1.09830 0.51720 0.0920*
H15B 0.18770 1.11120 0.43340 0.0920*
H16A 0.16270 0.97610 0.55430 0.0860*
H16B 0.30120 0.92320 0.51580 0.0860*
H17A 0.05640 0.86230 0.43620 0.0750*
H17B 0.05600 0.95660 0.35650 0.0750*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O19 0.0806 (9) 0.0577 (9) 0.0692 (9) −0.0120 (7) 0.0477 (7) −0.0006 (6)
N1 0.0525 (8) 0.0624 (9) 0.0526 (8) 0.0030 (7) 0.0321 (7) 0.0032 (7)
N12 0.0447 (7) 0.0501 (8) 0.0406 (7) 0.0023 (6) 0.0221 (6) 0.0023 (6)
C2 0.0446 (9) 0.0534 (10) 0.0599 (10) 0.0014 (7) 0.0254 (8) 0.0009 (8)
C3 0.0411 (8) 0.0607 (10) 0.0501 (9) −0.0022 (7) 0.0173 (7) −0.0045 (8)
C4 0.0419 (8) 0.0472 (9) 0.0412 (8) −0.0003 (7) 0.0212 (6) 0.0003 (7)
C5 0.0441 (9) 0.0469 (9) 0.0436 (9) −0.0039 (7) 0.0179 (7) −0.0008 (7)
C6 0.0468 (10) 0.0805 (13) 0.0529 (10) −0.0060 (9) 0.0161 (8) 0.0002 (9)
C7 0.0567 (11) 0.0964 (16) 0.0609 (12) −0.0073 (11) 0.0017 (9) 0.0001 (11)
C8 0.0819 (14) 0.0791 (14) 0.0470 (10) −0.0082 (11) 0.0000 (10) −0.0047 (9)
C9 0.0812 (14) 0.0618 (11) 0.0424 (9) −0.0068 (9) 0.0238 (9) −0.0057 (8)
C10 0.0555 (9) 0.0415 (9) 0.0448 (9) −0.0023 (7) 0.0227 (7) −0.0012 (7)
C11 0.0451 (10) 0.0932 (16) 0.0900 (15) 0.0016 (10) 0.0301 (10) −0.0044 (12)
C13 0.0576 (10) 0.0523 (10) 0.0480 (9) 0.0097 (8) 0.0219 (8) 0.0091 (7)
C14 0.0803 (13) 0.0496 (11) 0.0641 (12) 0.0029 (9) 0.0170 (10) −0.0019 (9)
C15 0.1127 (18) 0.0636 (13) 0.0579 (12) 0.0138 (12) 0.0233 (12) −0.0091 (10)
C16 0.0985 (16) 0.0738 (14) 0.0498 (11) 0.0185 (12) 0.0348 (10) −0.0001 (9)
C17 0.0607 (11) 0.0735 (13) 0.0616 (11) 0.0111 (9) 0.0388 (9) 0.0080 (10)
C18 0.0454 (9) 0.0591 (11) 0.0454 (9) 0.0002 (7) 0.0225 (7) 0.0031 (7)

Geometric parameters (Å, º)

O19—C18 1.228 (2) C2—H2 0.9800
N1—C2 1.446 (2) C3—H3A 0.9700
N1—C10 1.386 (2) C3—H3B 0.9700
N12—C4 1.470 (2) C4—H4 0.9800
N12—C13 1.464 (2) C6—H6 0.9300
N12—C18 1.347 (2) C7—H7 0.9300
N1—H1 0.8600 C8—H8 0.9300
C2—C11 1.516 (3) C9—H9 0.9300
C2—C3 1.516 (2) C11—H11A 0.9600
C3—C4 1.524 (2) C11—H11B 0.9600
C4—C5 1.515 (2) C11—H11C 0.9600
C5—C6 1.387 (2) C13—H13A 0.9700
C5—C10 1.400 (2) C13—H13B 0.9700
C6—C7 1.373 (3) C14—H14A 0.9700
C7—C8 1.369 (3) C14—H14B 0.9700
C8—C9 1.375 (3) C15—H15A 0.9700
C9—C10 1.397 (2) C15—H15B 0.9700
C13—C14 1.515 (3) C16—H16A 0.9700
C14—C15 1.520 (3) C16—H16B 0.9700
C15—C16 1.517 (3) C17—H17A 0.9700
C16—C17 1.521 (3) C17—H17B 0.9700
C17—C18 1.512 (3)
C2—N1—C10 119.82 (14) C5—C4—H4 107.00
C4—N12—C13 118.48 (12) C5—C6—H6 119.00
C4—N12—C18 118.62 (13) C7—C6—H6 119.00
C13—N12—C18 122.79 (14) C6—C7—H7 120.00
C2—N1—H1 120.00 C8—C7—H7 120.00
C10—N1—H1 120.00 C7—C8—H8 120.00
C3—C2—C11 112.49 (16) C9—C8—H8 120.00
N1—C2—C3 108.91 (14) C8—C9—H9 120.00
N1—C2—C11 109.66 (16) C10—C9—H9 120.00
C2—C3—C4 109.79 (14) C2—C11—H11A 109.00
N12—C4—C5 111.95 (13) C2—C11—H11B 109.00
C3—C4—C5 111.08 (13) C2—C11—H11C 109.00
N12—C4—C3 112.50 (13) H11A—C11—H11B 110.00
C6—C5—C10 118.62 (15) H11A—C11—H11C 110.00
C4—C5—C6 121.27 (15) H11B—C11—H11C 109.00
C4—C5—C10 120.05 (14) N12—C13—H13A 109.00
C5—C6—C7 122.08 (17) N12—C13—H13B 109.00
C6—C7—C8 119.17 (19) C14—C13—H13A 109.00
C7—C8—C9 120.51 (18) C14—C13—H13B 109.00
C8—C9—C10 120.89 (17) H13A—C13—H13B 108.00
N1—C10—C5 120.90 (15) C13—C14—H14A 109.00
N1—C10—C9 120.33 (16) C13—C14—H14B 109.00
C5—C10—C9 118.75 (16) C15—C14—H14A 109.00
N12—C13—C14 114.22 (14) C15—C14—H14B 109.00
C13—C14—C15 114.23 (16) H14A—C14—H14B 108.00
C14—C15—C16 114.64 (18) C14—C15—H15A 109.00
C15—C16—C17 114.77 (18) C14—C15—H15B 109.00
C16—C17—C18 113.52 (17) C16—C15—H15A 109.00
N12—C18—C17 116.96 (16) C16—C15—H15B 109.00
O19—C18—N12 122.76 (16) H15A—C15—H15B 108.00
O19—C18—C17 120.27 (16) C15—C16—H16A 109.00
N1—C2—H2 109.00 C15—C16—H16B 109.00
C3—C2—H2 109.00 C17—C16—H16A 109.00
C11—C2—H2 109.00 C17—C16—H16B 109.00
C2—C3—H3A 110.00 H16A—C16—H16B 108.00
C2—C3—H3B 110.00 C16—C17—H17A 109.00
C4—C3—H3A 110.00 C16—C17—H17B 109.00
C4—C3—H3B 110.00 C18—C17—H17A 109.00
H3A—C3—H3B 108.00 C18—C17—H17B 109.00
N12—C4—H4 107.00 H17A—C17—H17B 108.00
C3—C4—H4 107.00
C10—N1—C2—C3 −44.6 (2) C3—C4—C5—C6 −160.41 (16)
C10—N1—C2—C11 −168.08 (16) C3—C4—C5—C10 22.4 (2)
C2—N1—C10—C5 16.6 (2) C4—C5—C6—C7 −176.99 (19)
C2—N1—C10—C9 −165.36 (16) C10—C5—C6—C7 0.2 (3)
C13—N12—C4—C3 56.10 (18) C4—C5—C10—N1 −4.7 (2)
C13—N12—C4—C5 −69.81 (17) C4—C5—C10—C9 177.21 (15)
C18—N12—C4—C3 −127.62 (15) C6—C5—C10—N1 178.05 (16)
C18—N12—C4—C5 106.48 (16) C6—C5—C10—C9 0.0 (2)
C4—N12—C13—C14 −113.04 (16) C5—C6—C7—C8 −0.5 (3)
C18—N12—C13—C14 70.8 (2) C6—C7—C8—C9 0.5 (3)
C4—N12—C18—O19 1.8 (2) C7—C8—C9—C10 −0.3 (3)
C4—N12—C18—C17 −179.65 (14) C8—C9—C10—N1 −178.00 (17)
C13—N12—C18—O19 177.93 (15) C8—C9—C10—C5 0.1 (3)
C13—N12—C18—C17 −3.5 (2) N12—C13—C14—C15 −79.6 (2)
N1—C2—C3—C4 60.77 (18) C13—C14—C15—C16 56.7 (3)
C11—C2—C3—C4 −177.44 (16) C14—C15—C16—C17 −59.5 (3)
C2—C3—C4—N12 −176.30 (13) C15—C16—C17—C18 83.3 (2)
C2—C3—C4—C5 −49.92 (18) C16—C17—C18—O19 112.4 (2)
N12—C4—C5—C6 −33.7 (2) C16—C17—C18—N12 −66.2 (2)
N12—C4—C5—C10 149.10 (14)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N1—H1···O19i 0.86 2.40 2.988 (2) 126
C14—H14A···O19ii 0.97 2.57 3.320 (2) 134

Symmetry codes: (i) x+1/2, −y+3/2, z−1/2; (ii) −x+1/2, y+1/2, −z+1/2.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: XU5808).

References

  1. Bruker (2013). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Konishi, M., Ohkuma, H., Tsuno, T. & Oki, T. (1990). J. Am. Chem. Soc. 112, 3715–3716.
  3. Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470.
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814017826/xu5808sup1.cif

e-70-0o981-sup1.cif (25.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814017826/xu5808Isup2.hkl

e-70-0o981-Isup2.hkl (115.2KB, hkl)

Supporting information file. DOI: 10.1107/S1600536814017826/xu5808Isup3.cml

. DOI: 10.1107/S1600536814017826/xu5808fig1.tif

A view of the title mol­ecule, with atom labelling. Displacement ellipsoids are drawn at the 50% probability level.

a . DOI: 10.1107/S1600536814017826/xu5808fig2.tif

A viewed along the a axis of the crystal packing of the title compound.

CCDC reference: 1017682

Additional supporting information: crystallographic information; 3D view; checkCIF report


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