Bcl9 and Bcl9l (Bcl9/9l) encode Wnt signaling components that mediate the interaction between β-catenin and Pygo. Cantù et al. find that Bcl9/9l contribute in a Pygo-dependent, but β-catenin-independent, fashion to eye lens formation. Pax6, the master regulator of eye differentiation, directly activates Bcl9 and Bcl9l transcription.
Keywords: Wnt, mouse, Bcl9, Pygopus, lens induction, Pax6
Abstract
Bcl9 and Bcl9l (Bcl9/9l) encode Wnt signaling components that mediate the interaction between β-catenin and Pygopus (Pygo) via two evolutionarily conserved domains, HD1 and HD2, respectively. We generated mouse strains lacking these domains to probe the β-catenin-dependent and β-catenin-independent roles of Bcl9/9l and Pygo during mouse development. While lens development is critically dependent on the presence of the HD1 domain, it is not affected by the lack of the HD2 domain, indicating that Bcl9/9l act in this context in a β-catenin-independent manner. Furthermore, we uncover a new regulatory circuit in which Pax6, the master regulator of eye development, directly activates Bcl9/9l transcription.
Pygopus (Pygo) and Legless (Lgs) were discovered as dedicated Wnt signaling components in Drosophila (Kramps et al. 2002; Parker et al. 2002; Thompson et al. 2002) and Xenopus (Belenkaya et al. 2002). In Drosophila, pygo and lgs are classified as segment polarity genes, and mutations in their coding sequences lead to a dramatic developmental arrest, reminiscent of wingless mutations (Kramps et al. 2002; Parker et al. 2002; Thompson et al. 2002). They are considered to serve as dedicated and essential β-catenin transcriptional coactivators. Lgs simultaneously binds Pygo and Arm/β-catenin via two evolutionarily conserved homology domains, HD1 and HD2, respectively (Kramps et al. 2002). The prevailing model is that Pan/TCF > Arm/β-catenin > Lgs > Pygo serially recruit each other to the DNA in order to efficiently activate Wnt target gene expression, forming a “chain of adaptors.” In this model, the sole function of Lgs is to recruit Pygo to β-catenin (Städeli and Basler 2005).
Vertebrates feature two pygo genes, PYGO1 and PYGO2, and two lgs homologs, BCL9 and BCL9l (BCL9/9l). In contrast to β-catenin loss-of-function mutants, Pygo1/Pygo2 double-knockout mice proceed normally throughout gastrulation and die later during embryonic development from a series of tissue-specific defects. Pygo1 knockout mice are viable and fertile, with no apparent phenotype. Compound Pygo1/Pygo2 knockout mutants are indistinguishable from Pygo2 knockout, suggesting that Pygo2 plays the more important role during development (Li et al. 2007; Schwab et al. 2007; M Aguet, unpubl.). Unlike in Drosophila, in mice, Pygo1 and Pygo2 are now considered to be tissue-specific Wnt pathway components.
Bcl9/9l are necessary for the expression of Wnt targets in normal intestinal epithelia (Deka et al. 2010) and the myogenic progenitors during muscle regeneration, where a reduction of Bcl9/9l inhibits the Wnt-driven myogenic differentiation (Brack et al. 2009): This indicates that Bcl9/9l are required for the expression of key subsets of β-catenin target genes. Consistent with this, mutating β-catenin such that it cannot bind Bcl9/9l (β-catenin-D164A) results in embryonic lethality at mid-gestation, around embryonic day 10.5 (Valenta et al. 2011). In addition, a growing body of evidence indicates that Bcl9/9l and their interaction with β-catenin are important not only for normal cell functions but also in different types of tumors (Mani et al. 2009; Deka et al. 2010; Brembeck et al. 2011; Takada et al. 2012). When their interaction is abrogated in these tumors, an attenuated migratory potential is observed, accompanied by a decrease in the expression of the Lgr5+-associated stem cell genes (de la Roche et al. 2012; Kawamoto et al. 2012; A Moor, P Anderle, C Cantù, N Wiedemann, F Baruthio, P Rodriguez, J Deka, S André, T Valenta, B Györffy, et al., in prep.). The conclusion from these studies was that, in mammals, Bcl9/9l retains a critical global function for β-catenin-mediated target gene control, at least in a tissue-specific manner. Based on comparison with the Pygo2 knockout situation, this role can be considered, at least in part, Pygo-independent. However, the molecular function of Bcl9/9l during mammalian development and tissue homeostasis remains largely unexplored.
Here we present an analysis of a series of Bcl9/9l knock-in mouse strains in which, via the deletion of the HD1 or HD2 domains, Bcl9/9l lose the ability to bind Pygo or β-catenin, respectively. We found that both interactions are relevant for development, and their individual disruption leads to embryonic lethality. Unexpectedly, however, we found that Bcl9/9l contribute in a Pygo-dependent, but β-catenin-independent, fashion to eye lens formation, revealing for the first time that Bcl9/9l have functions that are separate from canonical Wnt signaling. Moreover, we provide molecular evidence for a novel genetic circuit containing Bcl9/9l and Pygo that does not involve β-catenin: Pax6, the master regulator of eye differentiation, directly activates Bcl9 and Bcl9l transcription. Pygo2 is required for the function of Bcl9/9l, and the Bcl9/9l–Pygo2 complex appears to sustain Pax6 expression. This reveals that, independently of canonical Wnt signaling, Bcl9/9l and Pygo2 constitute a critical molecular unit that responds to tissue-specific regulators, such as, in the lens, the Pax6 transcription factor.
Results and Discussion
Pygo2 is assumed to be recruited by Bcl9/9l to promote the output of the Wnt signaling pathway. However, clear evidence that the Bcl9/9l–Pygo2 interaction is relevant during mammalian development is lacking. To specifically investigate this, we generated constitutive knock-in Bcl9 and Bcl9l alleles that carry an in-frame deletion of the conserved HD1 (Fig. 1A; Supplemental Fig. S1), the domain responsible for binding to Pygo proteins (Kramps et al. 2002; Städeli and Basler 2005; Fiedler et al. 2008). This deletion abrogates the recruitment of Pygo proteins to the β-catenin transcriptional complex (Fig. 1A; Mosimann et al. 2009). Indeed, via GST pull-down assays, we confirmed that a Bcl9 protein lacking the HD1, when incubated with total protein extracts obtained from 12.5-d post-coitum (dpc) embryos, fails to bind Pygo2 but still binds β-catenin (Fig. 1B), supporting the validity of the rationale and indicating that a deletion of this domain does not lead to improper folding of the protein. Pygo1 was not detectable in our experiments, consistent with the previous finding that it is only weakly expressed later during embryonic development (Li et al. 2004). For this reason, in our study, we only considered the contribution of Pygo2.
Double-heterozygous knock-in mice (Bcl9ΔHD1/+; Bcl9lΔHD1/+) develop normally and do not display any obvious defect. Interestingly, mice homozygous mutant only in either Bcl9 or Bcl9l (that is, Bcl9ΔHD1/ΔHD1; Bcl9l+/+ and Bcl9+/+; Bcl9lΔHD1/ΔHD1) are born in ∼50% of the expected Mendelian ratios. This indicates a substantial redundancy between Bcl9 and Bcl9l, at least concerning the functions mediated by the HD1. In contrast, no double-homozygous mutants (Bcl9ΔHD1/ΔHD1; Bcl9lΔHD1/ΔHD1) were ever found later than 13.5 dpc (Fig. 1D), indicating embryonic lethality at this stage. Throughout the study, to simplify the analysis and strengthen the validity of the conclusion drawn, we investigate the effects of the simultaneous deletion in both genes and refer to these mice as Bcl9/9l-ΔHD1.
Of note, the complete loss of Bcl9/9l (Bcl9/9l knockout) causes an earlier lethality, occurring between 9.5 and 10.5 dpc (Supplemental Fig. S2; M Aguet, unpubl.); this suggests the interesting notion that, between 9.5 and 13.5 dpc, Bcl9/9l have Pygo-independent functions. Bcl9/9l-ΔHD1 mutant embryos at 13.5 dpc are slightly smaller than the control embryos (Fig. 1C); the cause of the lethality is currently under investigation. Remarkably, the timing of the embryonic lethality of Bcl9/9l-ΔHD1 mice is similar to that of Pygo1/Pygo2 knockout embryos (Supplemental Fig. S3). The time point differs slightly from that previously reported (Li et al. 2007; Schwab et al. 2007). This minor difference may be due to an influence of the genetic background or a difference between the independently generated genomic manipulations. These results indicate that an important aspect of Bcl9/9l function is mediated by the HD1 domain. With the caveat that other, so far unrecognized proteins may also interact with Bcl9/9l via the HD1 domain, the results show that the Pygo2–Bcl9/9l interaction is required for mouse development as of 13.5 dpc.
An aspect in which the Bcl9/9l-ΔHD1 embryos are identical to the Pygo2 knockout ones is that they display an obvious eye defect: The lens is absent (Fig. 2). Of note, the developing eye is one of the head structures displaying a marked expression of both Bcl9 and Bcl9l (Supplemental Fig. S4). The lens defect also often appears in triple-mutant mice, which retain only one wild-type allele of Bcl9 or Bcl9l (that is Bcl9+/ΔHD1; Bcl9lΔHD1/ΔHD1 and Bcl9ΔHD1/ΔHD1; Bcl9l+/ΔHD1). Interestingly, such genetic combinations most often lead only to a unilateral lens loss, a further indication that Bcl9 and Bcl9l are highly redundant with respect to the functions mediated by Pygo2 binding.
During eye development, the surface head ectoderm thickens to form the lens placode and at 10.5 dpc invaginates to generate the lens pit (Lang 2004). In Bcl9/9l-ΔHD1 embryos, lens development is blocked at this stage: The surface head ectoderm does not form the eye placode, the first morphological sign of lens development (Fig. 2, bottom panels), indicating that the Bcl9/9l–Pygo2 complex is required early at the onset of lens formation. Also, in Bcl9/9l knockout embryos, lens development is arrested at this stage (Supplemental Fig. S2E,F).
Interestingly, a positive role of Bcl9/9l in lens formation is in contradiction with the notion that Wnt signaling must be turned off during lens development (Smith et al. 2005; Machon et al. 2010). Therefore, we reasoned that Bcl9/9l might not act as Wnt signaling components in this tissue. This hypothesis predicts that, if Bcl9/9l can still bind Pygo2 but not β-catenin, the lens will develop correctly. To assess this possibility, we created a knock-in mouse strain carrying an in-frame deletion of HD2 (ΔHD2) in Bcl9 and Bcl9l (Fig. 3A; Supplemental Fig. S5): We and others have previously shown that, in the absence of the HD2 domain, Bcl9/9l can still bind to Pygo2 but not to β-catenin (Fig. 3B; Kramps et al. 2002; Städeli and Basler 2005).
Of note, double-mutant embryos (Bcl9ΔHD2/ΔHD2; Bcl9lΔHD2/ΔHD2, referred to as Bcl9/9l-ΔHD2), die at ∼10.5 dpc, earlier than Bcl9/9l-ΔHD1 mutants (Fig. 3C). This is consistent with the lethality caused by the β-catenin-D164A mutation, which also abrogates the Bcl9/9l–β-catenin interaction (Valenta et al. 2011). A corollary of this is that early Bcl9/9l functions are independent of Pygo2 but are mediated by β-catenin; in other words, a truncated “chain of adaptors” lacking Pygo2 can sustain mouse development until at least embryonic day 13.5.
In order to investigate whether the loss of the Bcl9/9l–β-catenin interaction also blocks lens formation at 10.5 dpc, we compared eye development in Bcl9/9l wild-type, Bcl9/9l-ΔHD1, and Bcl9/9l-ΔHD2 embryos (Fig. 3E). In wild-type embryos at 10.5 dpc, the lens pit is clearly distinguishable. In Bcl9/9l-ΔHD1 mutants, the lens pit is not forming. Importantly, in Bcl9/9l-ΔHD2 embryos, the lens pit is developing normally (Fig. 3E, right panel). This result indicates that, during lens formation, the Bcl9/9l–Pygo2 complex functions independently of the physical interaction with β-catenin.
In addition, we incorporated the lens-cre transgene, a widely used lens-specific Cre recombinase driver (Ashery-Padan et al. 2000), to generate Bcl9ΔHD1/flox; Bcl9lΔHD1/flox; lens-creTg/+ (lens-ΔHD1) and Bcl9ΔHD2/flox; Bcl9lΔHD2/flox; lens-creTg/+ (lens-ΔHD2) mice. Compared with control animals, at birth, lens-ΔHD1 mice have smaller lenses. The same effect is obtained upon the complete loss of Bcl9/9l in the lens in Bcl9flox/flox; Bcl9lflox/flox; lens-creTg/+. This is in agreement with data from Song et al. (2007), who found that lens-cre-driven Pygo2 deletion does not entirely recapitulate the lens loss induced by constitutive deletion of Pygo2. Importantly, however, lens-ΔHD2 pups have normally shaped lenses and are in all cases indistinguishable from control littermates (Supplemental Fig. S6). This indicates that the Bcl9/9l–Pygo2 complex does not require β-catenin to mediate its role during lens development.
To our knowledge, this is the first report demonstrating that Bcl9/9l act outside the canonical Wnt signaling cascade. A growing body of evidence indicates that, in mice, Pygo2 has tissue-specific, Wnt-independent functions in the testis (Nair et al. 2008; Cantù et al. 2013) and lens (Song et al. 2007). Also, in Drosophila, Pygo was recently reported to act in a β-catenin-independent manner during heart development (Tang et al. 2013, 2014). It will be critical to establish whether other Wnt-independent functions of Pygo2 require the interaction with Bcl9/9l and whether these functions are conserved among species.
Our finding that the Bcl9/9l–Pygo2 complex functions independently of β-catenin in eye development implies that, in this tissue, these factors also act independently from upstream canonical Wnt signals. The abrogation of the Bcl9/9l–Pygo2 interaction causes a lens arrest very reminiscent of Pax6 loss in this tissue (Ashery-Padan et al. 2000). Therefore, we reasoned that Pax6 might lie upstream of Bcl9/9l function. To test whether Pax6 controls Bcl9, Bcl9l, and Pygo2 expression, we exploited the mouse-derived lens cell line αTN4, a widely used model for lens cell differentiation. This cell line expresses Pax6 and its direct transcriptional target, αA-crystallin, encoded by the Cryaa gene (Yang and Cvekl 2005); importantly, Bcl9/9l and Pygo2 are also expressed (Fig. 4A), making this cell line a suitable model for studying their regulation.
We identified in silico Pax6 consensus sequences between −5 kb and +1 kb of the transcriptional start site (TSS) of Bcl9, Bcl9l, and Pygo2. To determine whether any of these serve as bona fide Pax6-binding sites, we performed chromatin immunoprecipitation (ChIP) experiments. We designed PCR primers to amplify the Pax6-binding sites located within evolutionarily conserved regions (Supplemental Fig. S7). Indicative of Pax6 binding, we found that specific regions upstream of Bcl9 and Bcl9l are enriched in our ChIP assay when using an anti-Pax6 antibody (Fig. 4B). Note that the Cryaa promoter, our positive control, displays a comparable enrichment, while no enrichment is observed in several other genomic regions (e.g., Prm2 promoter) (Fig. 4B). To probe the relevance of Pax6 binding within these regions, we treated αTN4 cells with siRNA against Pax6 (siPax6): Pax6 mRNA levels were reduced to <5% of normal expression, causing a down-regulation of its target αA-crystallin (Fig. 4C). Of note, Pax6 depletion also resulted in the down-regulation of both Bcl9 and Bcl9l transcripts.
To test whether Pax6 also affected Bcl9/9l expression in vivo, we monitored Bcl9/9l expression in the developing eye in the absence of Pax6 function. To this end, we exploited Small eye (Sey) mice that bear a Pax6-truncating mutation, a good model to investigate Pax6 loss of function in vivo (Hogan et al. 1986; Hill et al. 1991). Homozygous Pax6Sey/Sey embryos can be distinguished as early as 10.5 dpc by the phenotype that, at this stage, the ectoderm does not invaginate to form a lens pit (Hogan et al. 1986). In wild-type mice, we found Bcl9l (Fig. 4D) and Bcl9 (Supplemental Fig. S4) proteins to be highly expressed in the invaginating surface head ectoderm, overlapping with the Pax6 expression domain (Callaerts et al. 1997). In Pax6Sey/Sey embryos, the ectodermal Bcl9l expression appears to be strongly reduced compared with wild-type controls (Fig. 4D, cf. top and bottom panels). The same is true for Bcl9 (data not shown). Taken together, our in vitro and in vivo results strongly suggest that Pax6 is required for Bcl9 and Bcl9l transcription in developing lens cells, making them downstream effectors in this cascade. Of note, Bcl9l was also reported as a putative Pax6 target based on ChIP experiments from lenses of newborn mice combined with high-density oligonucleotide array hybridizations (ChIP–chip) (Xie et al. 2013); this is an independent validation of our findings.
In Pygo2-null mice, Pax6 levels are reduced in the surface head ectoderm at 10.5 dpc; on the other hand, when Pax6 function is lacking, Pygo2 expression is unaffected (Fig. 4C; Song et al. 2007, N Vilain and M Aguet, unpubl.). Therefore, Pygo2 appears to be genetically upstream of Pax6. We observed that abrogating the interaction between Bcl9/9l and Pygo2 leads to a very similar decrease of Pax6 expression in the surface head ectoderm at 10.5 dpc (Fig. 4F), indicating that Bcl9/9l not only are Pax6 targets but also act together with Pygo2 upstream of Pax6. The effect on Pax6 expression is not observed in the Bcl9/9l-ΔHD2 developing lens, lending further support to the notion that, in this context, Bcl9/9l act in a β-catenin-independent fashion. The epistatic hierarchy between Bcl9/9l–Pygo2, Pax6, and Bcl9/9l raises the prediction that, if Pygo2 expression was altered in lens cells, Pax6 and Bcl9/9l expression would be affected accordingly. To test this, we treated αTN4 cells with siRNA targeting Pygo2 (siPygo2): Consistently, Pygo2 down-regulation causes a decrease in Pax6 mRNA level and diminished levels of its target genes, Cryaa, Bcl9, and Bcl9l (Fig. 4E). Taken together, our results reveal the existence of a novel genetic regulatory circuit in which Bcl9/9l–Pygo2 act upstream of Pax6, which in turn activates Bcl9 and Bcl9l. Thus, in a β-catenin-independent manner, a Bcl9/9l–Pygo2 complex sustains correct lens formation during mouse development (Fig. 5).
Bcl9 and Bcl9l, in a manner requiring Pygo2 binding, thus emerge as new downstream effectors of Pax6 during lens development. In this context, their action does not appear to be modulated by upstream canonical Wnt signals but by a tissue-specific transcription factor, Pax6, the master regulator of the lens-specific differentiation program. The molecular mechanism by which the Bcl9/9l–Pygo2 complex achieves its tissue-specific function in lens differentiation is an interesting line of future investigation. One possibility is that the main function of the Bcl9/9l–Pygo2 complex is to sustain Pax6 expression. Consequently, by activating Bcl9/9l, Pax6 would buttress its own expression, creating a positive feedback loop, a very common mechanism in biological systems, instrumental to produce an all-or-none response to a signal (Brandman et al. 2005).
It is currently widely accepted that, in the lens, the Wnt pathway must be turned off (Smith et al. 2005), and a recent study discovered that this inhibition is mediated at least in part by Pax6 (Machon et al. 2010). It is therefore tantalizing to speculate that Bcl9/9l and Pygo2 not only act independently from β-catenin but, together with Pax6, are involved in the inhibition of the Wnt-induced genetic program, thus ensuring that lens development proceeds correctly. To test this speculation, a more detailed understanding of the timing and nature of Wnt signaling and its targets in the developing lens is needed. Our results provide a novel circuit and a novel paradigm (a β-catenin-independent Bcl9/9l–Pygo2 module) that need to be integrated into the emergent picture.
Materials and methods
Generation of Bcl9/9l knock-in mouse strain
Knock-in mutants in Bcl9 and Bcl9l were generated by standard techniques (inGenious Targeting Laboratory). Briefly, the targeting vector was electroporated into BA1 (C57BL/6 × 129/SvEv) hybrid embryonic stem cells. After selection with the antibiotic G418, surviving clones were expanded for PCR and Southern blotting analyses to confirm recombinant embryonic stem cell clones. Mouse embryonic stem cells harboring the knock-in allele were microinjected into C57BL/6 blastocysts. Resulting chimeras were bred to wild-type C57BL/6N mice to generate F1 heterozygous offspring. Neo cassette excision was obtained by crossing heterozygous knock-in animals with mice expressing Flp recombinase. All mouse experiments were performed in accordance with Swiss guidelines and approved by the Veterinarian Office of the Kanton of Zurich, Switzerland.
Cell culture and quantitative RT–PCR
The αTN4 cell line was cultured in DMEM supplemented with 10% FBS at 37°C. Total RNA was extracted using TRIzol (Invitrogen). Quantitative real-time SYBR Green-based PCR reactions were performed in triplicate and monitored with the ABI Prism 7900HT system (Applied Biosystem). All primers are listed in the Supplemental Material.
ChIP
αTN4 were fixed with 1% formaldehyde for 10 min at room temperature and lysed in a nuclei lysis buffer (1% SDS, 50 mM Tris, 10 mM EDTA, protease inhibitors). Chromatin was sonicated to a size between 200 and 1000 base pairs using a Covaris focused ultrasonicator (10 times for 1 min, 10% duty cycle, 5% intensity, 100 cycles per burst). The antibodies and the primers used are listed in the Supplemental Material.
Immunofluorescence
Previously fixed cryosections were blocked with 10% goat serum and 0.3% Triton-X-100 in PBS and incubated overnight at 4°C with the following antibodies: α-Pax6 (Millipore), α-Bcl9 (Abcam), α-Bcl9l (Abnova), and α-β-catenin (Cl. 14, BD Transduction Laboratories). Slides were then incubated with a fluorescently labeled secondary antibody (Alexa 488 goat anti-mouse or Alexa 555 goat anti-rabbit; 1:500). Nuclei were stained with DAPI (1:1000; Sigma).
Acknowledgments
We are much indebted to Gabriel Cavalheiro and Fabienne Murphy-Seiler for experimental help; Qing Xie, Christian Mosimann, and Bahar Degirmenci for precious inputs and discussion; Lukas Sommer, Peter Gruss, Christian Grimm, Richard Lang, Anastassia Stoykova, and Ales Cvekl for sharing reagents and mouse strains; and Martin Moser, Eliane Escher, and Charlotte Burger for technical support. This work was supported by the Swiss National Science Foundation (SNF) and grants from the Forschungskredit of the University of Zurich (to C.C.).
Footnotes
Supplemental material is available for this article.
Article is online at http://www.genesdev.org/cgi/doi/10.1101/gad.246140.114.
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