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. 2014 Oct 13;3:20. doi: 10.1186/2047-217X-3-20

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Copyright © 2014 Cer et al.; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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mirnaTA Outputs. (A) A Portable Network Graphic (PNG) image showing the raw data (before normalization) vs. NQT data (after normalization). (B) A heat map of differentially expressed miRNAs with statistical significance (P < 0.05) which were identified to be linearly increasing or decreasing using linear regression model. (C) One of the many intermediate data files (shown here is a text file of P-values, intercept and slope data of significant miRNAs). (D) A heat map of differentially expressed miRNAs with statistical significance (P < 0.05) which were identified to be increasing or decreasing using either cumulative distribution function (CDF) of the normal distribution or analysis of variance (ANOVA). Note that all these images and text files are available for viewing on web browsers by opening ‘mirnata.html’ file in ‘output_files’ directory.