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. 2014 Oct 30;9(10):e112334. doi: 10.1371/journal.pone.0112334

Correction: Phenotypic and Genotypic Characteristics of Novel Mouse Cell Line (NIH/3T3)-Adapted Human Enterovirus 71 Strains (EV71:TLLm and EV71:TLLmv)

The PLOS ONE Staff
PMCID: PMC4214789

There are errors in Table 3. Please see the corrected Table 3 here.

Table 3. Adaptive mutations observed in the 5'UTR and P1 regions of EV71:TLLm and EV71:TLLmv viral genomes.

EV71:BS vs EV71:TLLm EV71:BS vs EV71:TLLmv
Amino acid changes Amino acid changes
Genome region Nucleotide changes Polyprotein1 Mature protein2 Genome region Nucleotide changes Polyprotein6 Mature protein7
Cloverleaf Cloverleaf C 140 G
IRES 3 A 141 G IRES A 141 C
G 195 C T 209 C
T 209 C G 258 A
G 258 A C 370 T
C 370 T Not applicable G 448 A Not applicable
G 448 A A 502 C
T 502 C G 675 T
C 709 T T 677 C
A 671 T C 687 T
G 675 T C 709 T
T 678 INS4 678-681 INS
726-745 DEL5
VP4 A 809 G E 21 G E 21 G VP4 A 809 G E 21 G E 21 G
VP2 G 1359 A V 204 I V 135 I VP2 G 1359 A V 204 I V 135 I
G 1385 C S 213 T S 144 T G 1385 C S 213 T S 144 T
A 1400 T K 218 I K 149 I A 1400 T K 218 I K 149 I
T 1428 C E 228 P E 159 P
G 1429 C E 228 P E 159 P
VP3 G 1900 C A 385 P A 62 P
A 2287 G T 514 A T 191 A
A 2421 G I 558 M I 235 M
VP1 T 2462 C V 572 A V 7 A VP1 T 2462 C V 572 A V 7 A
C 2725 T L 660 F L 95 F C 2530 A Q 595 K Q 30 K
A 2734 G K 663 E K 98 E A 2719 G I 658 V I 93 V
A 2752 G N 669 D N 104 D T 2724 A D 659 E D 94 E
A 2876 C E 710 A E 145 A C 2725 T L 660 F L 95 F
A 2943 T E 732 D E 167 D A 2734 G K 663 E K 98 E
C 2947 T L 734 F L 169 F A 2752 G
C 3165 T S 806 L S 241 L A 2753 G N 669 G N 104 G
A 2876 C E 710 A E 145 A
A 2943 T E 732 D E 167 D
C 2947 T L 734 F L 169 F
C 3165 T S 806 L S 241 L
T 3175 C Y 810 H Y 245 H
G 3184 A V 813 I V 248 I
G 3319 T A 858 S A 293 S
1

Numbering of amino acids in the uncleaved polyprotein prior to maturation.

2

Numbering of amino acids in the mature protein.

3

IRES - Internal Ribosome Entry Site.

4

INS – Insertion.

5

DEL – Deletion.

There are errors in Table 4. Please see the corrected Table 4 here.

Table 4. Adaptive mutations observed in the P2 and P3 regions of EV71:TLLm and EV71:TLLmv viral genomes.

EV71:BS vs EV71:TLLm6 EV71:BS vs EV71:TLLmv11
Amino acid changes Amino acid changes
Genome region Nucleotide changes Polyprotein7 Mature protein 8 Genome region Nucleotide changes Polyprotein Mature protein
2A G 3722 A G 992 E G 130 E 2A G 3722 A G 992 E G 130 E
2C A 4366 G T 1207 A T 96 A 2C A 4366 G T 1207 A T 96 A
3A C 5117 T A 1457 V A 17 V
3B T 5357 C L 1537 P L 11 P 3B T 5357 C L 1537 P L 11 P
3C A 5557 G I 1604 V I 56 V 3C A 5557 G I 1604 V I 56 V
A 5569 G I 1608 V I 60 V A 5569 G I 1608 V I 60 V
3D A 6211 G N 1822 D N 91 D 3D A 6070 T T 1775 S T 44 S9
T 6835 A S 2030 T S 299 T4 T 6137 C V 1797 A V 66 A3
A 7128 T R 2127 S R 396 S5 A 6211 G N 1822 D N 91 D
T 7247 C V 2167 A V 436 A5 C 6404 G S 1886 C S 155 C
T 6592 G W 1949 G W 218 G10
T 6835 A S 2030 T S 299 T4
A 7128 T R 2127 S R 396 S11
T 7247 C V 2167 A V 436 A5
6

Mutations are based on alignment with the reference EV71:BS genome.

7

Numbering of amino acids in the uncleaved polyprotein prior to maturation.

8

Numbering of amino acids in the mature protein.

9

Mutation located in the Ring finger domain of the RNA-dependent RNA Polymerase.

10

Mutation located in the Palm domain of the RNA-dependent RNA Polymerase.

11

Mutation located in the Thumb domain of the RNA-dependent RNA Polymerase.

Reference


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