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The Journal of Biological Chemistry logoLink to The Journal of Biological Chemistry
. 2014 Oct 10;289(48):33529–33542. doi: 10.1074/jbc.M114.604652

Direct Determination of Multiple Ligand Interactions with the Extracellular Domain of the Calcium-sensing Receptor*

Chen Zhang ‡,§,1, You Zhuo ‡,1, Heather A Moniz , Shuo Wang , Kelley W Moremen , James H Prestegard , Edward M Brown , Jenny J Yang ‡,§,2
PMCID: PMC4246106  PMID: 25305020

Background: The calcium-sensing receptor (CaSR) senses alterations in extracellular Ca2+ mainly through its extracellular domain (ECD).

Results: Interactions of ligands with the CaSR were characterized using purified ECD and biophysical techniques.

Conclusion: Ca2+ and l-Phe bind to both the complex and high mannose forms of the CaSR ECDs and increase binding affinities for each other.

Significance: Our findings will provide an essential tool for future structural studies in GPCRs.

Keywords: Amino Acid, Calcium, G Protein-coupled Receptor (GPCR), Nuclear Magnetic Resonance (NMR), Spectroscopy, l-Phenylalanine, Calcium-sensing Receptor, Mammalian Expression, Saturation Transfer Difference

Abstract

Numerous in vivo functional studies have indicated that the dimeric extracellular domain (ECD) of the CaSR plays a crucial role in regulating Ca2+ homeostasis by sensing Ca2+ and l-Phe. However, direct interaction of Ca2+ and Phe with the ECD of the receptor and the resultant impact on its structure and associated conformational changes have been hampered by the large size of the ECD, its high degree of glycosylation, and the lack of biophysical methods to monitor weak interactions in solution. In the present study, we purified the glycosylated extracellular domain of calcium-sensing receptor (CaSR) (ECD) (residues 20–612), containing either complex or high mannose N-glycan structures depending on the host cell line employed for recombinant expression. Both glycosylated forms of the CaSR ECD were purified as dimers and exhibit similar secondary structures with ∼50% α-helix, ∼20% β-sheet content, and a well buried Trp environment. Using various spectroscopic methods, we have shown that both protein variants bind Ca2+ with a Kd of 3.0–5.0 mm. The local conformational changes of the proteins induced by their interactions with Ca2+ were visualized by NMR with specific 15N Phe-labeled forms of the ECD. Saturation transfer difference NMR approaches demonstrated for the first time a direct interaction between the CaSR ECD and l-Phe. We further demonstrated that l-Phe increases the binding affinity of the CaSR ECD for Ca2+. Our findings provide new insights into the mechanisms by which Ca2+ and amino acids regulate the CaSR and may pave the way for exploration of the structural properties of CaSR and other members of family C of the GPCR superfamily.

Introduction

The calcium-sensing receptor (CaSR)3 is a seven-transmembrane protein that belongs to family C of the G protein-coupled receptor superfamily (1). The CaSR is named after its major function in regulating calcium homeostasis in the body. Its predominant expression in parathyroid and kidney cells allows this receptor to modulate parathyroid hormone secretion as well as renal calcium reabsorption (25). The CaSR is also widely expressed in other sites including the gastrointestinal system (6), the central nervous system (7), breast (8), and bone (9), among others, where it plays crucial roles in physiological and pathological functions, including cell proliferation, tissue differentiation, and cancer development (10). In addition to its primary agonist, Ca2+, the CaSR can also respond to various other stimuli, including other cations (11), amino acids (7, 12), polyamines (13), and polypeptides (14). l-Amino acids, especially aromatic amino acids (e.g. l-phenylalanine), are thought to enhance the sensitivity of CaSR to the extracellular calcium concentration ([Ca2+]o) by interacting with the extracellular domain (ECD) of the receptor as demonstrated in several in vivo studies using HEK293 cells transfected with the CaSR (12, 15). Branched-chain amino acids (e.g. l-aspartic acid, l-lysine etc.) are less effective than aromatic amino acids (12). This could be one potential explanation for how dietary protein modulates [Ca2+]o homeostasis in normal individuals as well as in patients with chronic renal failure (6, 16).

Like many membrane receptors, the CaSR is heavily glycosylated with 11 highly conserved putative N-linked glycosylation sites (Asn-Xaa-Ser/Thr). These glycosylation sites are considered to be critical for the cell surface expression of CaSR (17). Membrane CaSR functions as a dimer and is comprised of the three major structural domains of the GPCR family C: an ECD that covers from 20 to 612 amino acids (2), a seven-transmembrane domain (613–862) (18), and an intracellular tail of 216 amino acids (19), which participates in conveying extracellular stimuli into intracellular signaling pathways. Although efforts to obtain pure ECD protein have been reported by two independent groups (20, 21) using an HEK293 cell line stably transfected with the CaSR ECD and insect cells expressing the CaSR ECD, respectively, the structure of CaSR remains undetermined to date.

Our laboratory has built an homology model of the CaSR ECD based on the crystal structure of metabotropic glutamate receptor 1 (mGluR1) (2224) and identified five potential Ca2+ binding pockets using computational algorithms developed in our lab (22, 23). Using site-directed mutagenesis and intracellular Ca2+ readout, we further verified the roles of those predicted Ca2+-binding sites and an l-Phe-binding site in regulating functional activities of the receptor (24).

Despite extensive functional studies on the CaSR by different groups (12, 15, 2527), how calcium and l-Phe directly interact with the extracellular domain is still under debate due to the lack of structural information as well as absence of binding assays for sites with weak binding affinities (0.1–30 mm). One of several challenges is related to the high level of glycosylation in the CaSR ECD that not only increases the size of the protein but introduces structural heterogeneity into the entire system. Direct visualization of interactions of weak binding ligands with a ECD of the receptor may also be hampered by the high off rate associated with weak binding. For example, Ca2+-binding sites of mGluRs are not visible in all reported x-ray structures (28). Direct monitoring of ligands (Ca2+ and l-Phe) and protein interactions in solution and characterization of the biophysical properties of such a large protein as well as collection of structurally related information using spectroscopic methods also requires a large amount of homogenous native protein.

In the present study, we report our progress in expression and purification of the glycosylated extracellular domain of CaSR (ECD) (residues 20–612) using two mammalian expression systems that generate distinct glycosylated products, wild type 293-F cells or the HEK293S (GnTI) cell line. The former wild type cell line generates recombinant products harboring heterogeneous complex-type N-glycans. In contrast, the second HEK293S (GnTI) cell line lacks the enzyme GlcNAc transferase I (GnTI) (29), an enzyme required for the first step in the conversion of high mannose N-glycans into complex and hybrid structures (30, 31). The HEK293S (GnTI) cells are unable to synthesize complex and hybrid N-glycans and instead produce oligosaccharides containing a more homogeneous collection of structures based on Man5GlcNAc2-Asn (32).

Here, a soluble, secreted form of the CaSR ECD was generated in 293-F or HEK293S (GnTI) cells by transient transfection, and the protein was further purified by affinity chromatography. The biophysical properties of the native CaSR ECDs were characterized using fluorescence titration spectroscopy, circular dichroism, and NMR spectroscopy. We demonstrate herein that the ECD of CaSR directly interacts with Ca2+ and l-Phe, with binding affinities in the millimolar range for both.

MATERIALS AND METHODS

Construct CaSR-ECD cDNA

For engineering the CaSR-ECD, the sequence Tyr20-Phe612 was cloned from CaSR-pCDNA 3.1(+) by standard PCR methods using the 5′ primer (CCGGAATTCTACGGGCCAGACCAGCGAGCCCAA) and 3′ primer (CCCAAGCTTTTAAAAGGGCTCCGTCCACGACAGAAACT). The cloned sequence was then inserted into the plasmid pGEn1 between the EcoRI and HindIII restriction sites. The engineered protein contains a signal peptide (MRLLTALFAYFIVALILAFSVSAKS) followed by a His tag and a StrepII tag at the N terminus. A FLAG tag site was inserted between residues Asp371 and Thr372. The plasmid constructs were confirmed by DNA sequencing (GENEWIZ, South Plainfield, NJ).

Protein Expression and Purification

For mammalian expression, either wild type HEK293 cells in suspension culture (FreeStyle 293-F cells, Invitrogen) or mutant HEK293S GnTI cells (29) (ATCC catalog number CRL-3022) were transfected with pGEn1-CaSR-ECD plasmid using the polyethyleneimine method as previously described (33). Metabolic labeling of recombinant CaSR ECD with 15N-Phe was performed as described previously (54). The CaSR-ECD was secreted into the culture medium and harvested after centrifugation 3 times at 1500 × g for 10 min. The supernatant was diluted with the following buffer, 75 mm Tris-HCl, 360 mm NaCl, pH 8.0, at a ratio of 1:2 and further filtered through a 0.45-μm filter (Millipore). The filtered medium was applied to a 16/10 HisPrep HP column (GE Healthcare) pre-equilibrated with Buffer A (50 mm Tris-HCl, 150 mm NaCl, 20 mm imidazole), and a linear segmented gradient of 0–100% Buffer B (50 mm Tris-HCl, 500 mm NaCl, and 500 mm imidazole, pH 7.4) was run to elute the protein. The enriched protein was further desalted (GE HiTrap) using 10 mm Tris buffer, pH 7.4. The concentrations of CaSR-ECD were determined using the Bio-Rad protein assay.

Lectin-Agarose Binding Assay

Fractions containing the CaSR ECD following HisPrep chromatography were mixed with 30 μl of RCA-1 lectin-agarose (Vector Lab, Burlingame, CA) for overnight incubation at 4 °C followed by washing with PBS. The ECD protein was eluted using 0.2 m galactose. The eluted fractions were analyzed by Western blot, using an anti-FLAG antibody.

Deglycosylation Reactions

Triton X-100 was added to heat- and SDS-denatured, purified ECD protein (20 μg) at a final concentration of 2% before the protein was subjected to the peptide:N-glycosidase F (PNGase F) deglycosylation procedure. Approximately 1.4 units of PNGase F were added per microgram of purified protein and incubated for 2 h at 37 °C. The deglycosylated samples were further analyzed by Western blot using the anti-FLAG antibody. For endoglycosidase F1 (Endo F1) enzyme treatment under native conditions, purified CaSR-ECD protein generated in HEK293S (GnTI) cells was taken directly from the appropriate FPLC fractions and incubated with Endo F1 at a mass ratio 1:3 in 10 mm Tris buffer, pH 7.4, for overnight incubation at 4 °C.

Circular Dichroism

The circular dichroism spectra were recorded from 190 to 260 nm on a Jasco-810 spectropolarimeter purged by N2 and equipped with a temperature control system (CTC-345). Spectral and temperature-dependent measurements were performed at a bandwidth of 2 nm using a U-type quartz cell of 0.1-mm path length with protein concentrations ranging from 8 to 10 μm in 10 mm Tris-HCl, pH 7.4. Five spectra were recorded for each sample at a scan rate of 50 nm/min and response time of 1 s. The continuous temperature dependence of the ellipticity at 222 nm was measured using a scan rate of 50 °C/h and a delay time of 100 s. The cuvette was sealed with parafilm to prevent solvent evaporation.

The spectra were deconvoluted using the Selcon method after subtracting the spectrum of the buffer as the blank, and the CD data are depicted in units of molar ellipticity per residue. The melting curve was fitted using the Equation 1,

graphic file with name zbc04814-0242-m01.jpg

to obtain the thermal transition point, where ΔS and ΔSmax are the signal changes at each data point and the final point; Tm and T are the transition temperature and experimental temperature, respectively. k is a transition rate that defines how fast the temperature-induced change occurs, which is represented by the slope of the transition phase in the fitting curve. A smaller k results in a sharper transition (34).

Fluorescence Spectroscopy

A Photon Technology International (Edison, NJ) Lifetime Fluorimeter was used to record the fluorescence spectra at room temperature using a 1-cm path length cell. Intrinsic tryptophan emission spectra were recorded from 300 to 400 nm with an excitation wavelength at 282 nm. The slit widths were set at 0.3–1 nm for excitation and 1.0–2.0 nm for emission, respectively. The calcium titration was performed in a buffer system (10 mm HEPES, 120 mm NaCl, and 10 mm KCl, pH 7.2) with protein concentrations of 1.5–2.0 μm by adding a known amount of CaCl2. The free Ca2+ concentration in the buffers used in this study, which were not treated with Chelex-100, has been measured to be <10 μm using BAPTA, a calcium-specific chelator. Our previous studies showed that the Ca2+ dissociation constant was determined to be ∼0.7 mm for the “high affinity” Ca2+-binding site (22). Given this fact, the background Ca2+ concentration may be negligible. For the Tyr/Trp-sensitized Tb3+ fluorescence energy transfer (Tb3+-FRET) assay, protein samples (1.5–2.0 μm) were in 20 mm PIPES, 10 mm KCl, pH 6.8. The emission spectra were collected from 500 to 600 nm with the excitation at 282 nm. The slit widths for excitation and emission were set at 1 and 3 nm, respectively. Secondary Rayleigh scattering was circumvented by using a glass filter with a cutoff of 320 nm. The Tb3+ titration was performed by adding various volumes of Tb3+ stock solutions (1 mm) stepwise into the cuvettes. The Ca2+-Tb3+ competition experiments were performed in solutions containing 30–50 μm Tb3+ and 2 μm protein as the starting point. The stock solutions of 100 mm or 1 m CaCl2 with the same concentration of Tb3+ were gradually added into the mixture. The background fluorescence intensity was subtracted using logarithmic fitting and the Tb3+ binding affinity of the protein was calculated by fitting normalized fluorescence intensity data using the Hill equation,

graphic file with name zbc04814-0242-m02.jpg

where ΔS is the total signal change in the equation, Kd is the apparent binding affinity, n is the Hill coefficient, and [M] is the free metal concentration.

The Ca2+ competition data were first analyzed to derive the apparent dissociation constant by Equation 3. By assuming that the sample is saturated with Tb3+ at the starting point of the competition, the Ca2+ binding affinity is further obtained using Equation 3,

graphic file with name zbc04814-0242-m03.jpg

where Kd,Ca and Kd,Tb are the dissociation constants of Ca2+ and Tb3+, respectively. Kapp is the apparent dissociation constant.

ANS Binding Measurements

For the ANS (8-anilino-1-naphthalenesulfonic acid) binding assay, protein samples were incubated with a buffer containing 40 μm ANS, 50 mm Tris-HCl, and 100 mm KCl, pH 7.4, with either 5 mm EGTA or 3 mm Ca2+ at 4 °C in the dark for 1 h with constant rotation prior to measurements. The excitation wavelength was set at 370 nm, and the emission spectra were acquired from 400 to 600 nm. For the Ca2+ titration, the protein concentration was 2.0 μm and the Ca2+ concentration was varied from 0 to 30 mm in 20 mm Tris-HCl, 50 mm KCl, pH 7.4.

NMR Spectroscopy of CaSR ECD

All NMR spectroscopy experiments were performed on a Varian/Agilent DD2 800 MHz spectrometer equipped with the cryogenic HCN probe at 37 °C. The CaSR-ECD was prepared in 10 mm Tris, pH 7.4, 20% (v/v) D2O for NMR experiments. For the calcium titration, both one-dimensional 1H and two-dimensional 1H-15N NMR spectra of 15N-Phe selectively labeled CaSR-ECD in the presence of 0, 1, 3, 5, and 10 mm Ca2+ were collected and processed by MestReNova (35) and NMRpipe (36), respectively. The 1H-15N-HSQC data were analyzed by Sparky (37) and the chemical shift perturbations were calculated using the equation,

graphic file with name zbc04814-0242-m04.jpg

where Δδav is the chemical shift perturbations of the 1H-15N spectra, Δδ is the chemical shifts for 1H or15N (38).

For saturation transfer difference (STD)-NMR, 20 μm CaSR-ECD expressed in HEK293S (GnTI) cells was prepared in 10 mm Tris in D2O, pD 7.8. The blank experiment without protein was performed to examine the absence of direct saturation of l-Phe in certain on-resonance frequencies. Saturation transfer from the protein to l-Phe was achieved by irradiating at −1 ppm with a duration of 3 s. The reference spectra were obtained by irradiating at 30 ppm. The STD-NMR data were processed and analyzed by MestReNova and the STD amplification factor was calculated by using the equation,

graphic file with name zbc04814-0242-m05.jpg

where AF stands for amplification factor.

The Kd was determined using the equation,

graphic file with name zbc04814-0242-m06.jpg

where αstd is the amplification when it is saturated by a ligand (39).

Statistics

The data are presented as mean ± S.E. of three independent experiments. Statistical analyses were carried out using the unpaired Student's t test when two groups were compared. A p value of <0.05 was considered to indicate a statistically significant difference.

RESULTS

The CaSR ECD Forms a Dimer in Culture Medium

Wild type 293-F cells or HEK293S (GnTI) cells were transiently transfected with engineered CaSR ECD cDNA (Fig. 1a). The signal peptide at the N terminus led to secretion of the CaSR ECD (Fig. 1b), which is predicted to have five potential Ca2+-binding sites based on the homology model of mGluR1 (Fig. 1c), into the culture medium (22). These His-tagged CaSR ECDs were efficiently separated from other proteins with a HisPrep column using an imidazole gradient (Fig. 2, a and b). The fractions containing CaSR ECD were collected and separated by SDS-PAGE under reducing conditions (Fig. 2, a and b). Immunoblots were further applied to visualize the CaSR in the samples using specific anti-CaSR antibody. As shown in Fig. 2 (panels c–e) CaSR ECD from 293-F cells exhibited a diffuse band in the range from ∼100 to ∼130 kDa suggesting heterogeneity of glycosylation, whereas the GnTI CaSR has a single sharp band with a molecular mass of ∼95 kDa. The non-reducing samples from the 293-F and GnTI cells expressing the CaSR ECD have molecular masses at around 240 and 200 kDa, respectively, corresponding to the respective calculated molecular masses of the dimerized forms of the receptor extracellular domain.

FIGURE 1.

FIGURE 1.

Schematic representation of the extracellular domain of the CaSR. a, the first 26 amino acids are a signal sequence present in the vector. The arrow indicates the beginning of the CaSR ECD sequence. The stop codon is introduced immediately after residue 612, resulting in secretion of the receptor into the cell culture medium. Putative glycosylation sites are hightlighted using branches. The loop inserted between Asp371 and Thr372 is the engineered FLAG tag. Underlined and labeled regions represent peptide sequences that can be recognized by peptide-specific monoclonal antibody ADD. b, schematic figure of protein expression experiment design using 293-F and HEK293S (GnTI) cells. c, model structure of CaSR ECD based on the mGluR1 crystal structure (PDB entry 1ISR) was generated using Swiss-Model. The global view of the ECD is shown in the left panel. Spheres highlighted in red, Ca2+; green, residues involved in predicted Ca2+-binding sites; violet, locations of tryptophan residues. l-phenylalanine (in yellow) was positioned at the hinge region between the two lobes by Autodock Vina. Right bottom panel: a zoomed in view of the site 1 Ca2+-binding pocket. Residues involved in Ca2+-binding site 1 are highlighted in green.

FIGURE 2.

FIGURE 2.

CaSR ECD proteins isolated from cell culture medium are glycosylated. a, 293-F cells transfected with plasmid encoding the 293-F CaSR ECD sequence were continuously cultured for 6 days. Then cell culture medium was collected and underwent the protein purification procedure using a nickel affinity column. Representative tracing of A280 measured in milli-absorbance units for protein eluted by imidazole. Inset: Coomassie Blue staining of the representative fractions from the affinity column separation. The lanes marked M are protein molecular weight standards. b, the same chromatography of protein purification using secreted proteins from HEK293S (GnTI) cells were transfected with the CaSR ECD. c, 293-F CaSR ECD proteins (50 μg) from the indicated fractions were heated at 100 °C in sample buffer containing β-mercaptoethanol for 5 min before loading on the gels. d, GnTI CaSR ECD proteins were treated using the aforementioned methods in c. e, left two lanes were loaded with 293-F/GnTI CaSR ECD incubated at room temperature for 5 min in sample dissociation buffer without reducing reagent; right two lanes were loaded with 293-F/GnTI CaSR ECD boiled for 5 min in sample dissociation buffer with β-mercaptoethanol. f, 293-F CaSR ECD protein (0.5 mg) was incubated with R. communis agglutinin I lectin-agarose beads overnight at 4 °C followed by a washing step with PBS. First lane, elution fraction using PBS without addition of galactose. Second lane, elution fraction using PBS containing 200 mm galactose. Third lane, 5 μl of the R. communis agglutinin I lectin-agarose beads after incubation with protein were loaded into the gel as a positive control. The elution fractions were further analyzed by immunoblot using anti-FLAG antibody. g, purified 293-F CaSR ECD (20 μg) was incubated at 100 °C for 5 min to denature the protein followed by treatment with PNGase F for 2 h at 37 °C. Protein aliquots with or without PNGase F were loaded in the reducing SDS-PAGE gel and further analyzed by Western blot using an anti-FLAG antibody. h, the purified GnTI-CaSR-ECD protein was mixed with Endo F1 at a mass ratio 1:3 in 10 mm Tris buffer, pH 7.4, with overnight shaking at 4 °C. Samples were detected using anti-FLAG antibody by immunoblot under reducing conditions.

The Secreted CaSR ECD Is Glycosylated

To verify that the secreted 293-F CaSR ECD is glycosylated, Ricinus communis agglutinin I-agarose beads, which preferentially bind to complex oligosaccharides, were incubated with the purified protein. The CaSR ECD expressed in 293-F cells interacted with R. communis agglutinin I beads (Fig. 2f) and high concentrations of galactose (200 mm) competed with the glycoprotein for interaction with the lectin-agarose beads. PNGase F cleaves high mannose, hybrid, and complex oligosaccharides from N-linked glycoproteins between the innermost acetylglucosamine (GlcNAc) and the underlying asparagine residues (40). Cleavage of denatured CaSR ECD generated in 293-F cells with PNGase F resulted in a decrease from ∼100 to ∼ 80 kDa (Fig. 2g) indicating that the protein is highly glycosylated. Similarly, Endo F1 cleaves between the two core GlcNAc residues on high mannose, but not hybrid or complex type N-glycans to leave a single GlcNAc residue attached to the polypeptide (41). Cleavage of the CaSR ECD derived from HEK293S (GnTI) cells with Endo F1 under non-denaturing conditions resulted in the production of a lower molecular mass band at ∼87 kDa in the reducing SDS-PAGE gels, which indicates that this recombinant product contains exclusively high mannose N-glycans.

Measuring the Secondary and Tertiary Structure of CaSR ECDs

To analyze the secondary structures of the purified CaSR ECDs, circular dichroism measurements were performed. Typical far-UV CD spectra for both protein preparations are shown in Fig. 3. Analysis of all the spectra indicated that the purified 293-F and GnTI CaSR ECD shared similar secondary structures with α helical contents of 52–58% and β-sheet contents of 17–25%. The addition of calcium produced minimal changes in the spectra of either the 293-F CaSR ECD or the GnTI CaSR ECD (Fig. 3, a and b, Table 1).

FIGURE 3.

FIGURE 3.

The secondary structure and stability of purified ECDs. a, far-UV CD spectrum of 293-F CaSR ECD in 10 mm Tris, pH 7.2, with or without 2.0 mm Ca2+, at 25 °C. b, far-UV CD spectrum of GnTI CaSR ECD in 10 mm Tris, pH 7.2, with or without 2.0 mm Ca2+, at 25 °C. c, temperature dependence of the molar ellipticity at 222 nm for 293-F CaSR ECD (closed circle) and GnTI CaSR ECD (open circle) in 10 mm Tris, pH 7.2. d, the purified 293-F CaSR ECD protein aliquots were incubated in 10 mm Tris buffer, pH 7.2, at room temperature for the indicated number of days. Samples were then mixed with loading buffer with or without β-mercaptoethanol before being applied in the gel. R, without β-mercaptoethanol. e, the same experiment as in d but with GnTI CaSR ECD.

TABLE 1.

Secondary structure of CaSR ECDs at 25 °C

The signal from CD spectra was further deconvoluted using programs SELCON, CONTIN, and CDSSTR. The average numbers of the secondary structure calculations are shown.

α-Helix
β-Strands
Turns
Unordered
Without Ca2+ With Ca2+ Without Ca2+ With Ca2+ Without Ca2+ With Ca2+ Without Ca2+ With Ca2+
293-F ECD 58 ± 1% 55 ± 6% 17 ± 1% 21 ± 4% 6 ± 2% 5 ± 1% 18 ± 4% 15 ± 4%
GnTI ECD 52 ± 5% 60 ±4% 25 ± 3% 18 ± 1% 5 ± 1% 7 ± 2% 18 ± 3% 18 ± 3%
Modeled ECD 30.0% 17.8% 52.2%

The tryptophan environment and the packing of proteins can be monitored by analyzing the intrinsic tryptophan emission spectra at 300 to 400 nm using an excitation wavelength of 282 nm, because there are 12 Trp residues in the ECD. The emission spectrum of free Trp has a peak at around 350 nm. The emission peak undergoes a blue-shift if the tryptophan is embedded in a hydrophobic environment. All the Trp emission spectra of the various forms of the CaSR ECD showed a peak at around 334 nm indicating that the proteins have retained their native-like structure (Fig. 4).

FIGURE 4.

FIGURE 4.

Tryptophan fluorescence titration of CaSR ECDs. The calcium titration was performed in a buffer system (10 mm HEPES, 120 mm NaCl, and 10 mm KCl, pH 7.2) with a protein concentration of 1.5–2.0 μm. a, Trp fluorescence spectra of 293-F CaSR ECD in the presence of 0 (- - -) and 15 mm Ca2+ (—). b, Trp fluorescence spectra of GnTI CaSR ECD in the presence of 0 (- - -) or 15 mm Ca2+ (—). c, calcium titration curve of 293-F CaSR ECD (closed circle: without l-Phe; open circle, in the presence of 10 mm l-Phe). d, calcium titration curve of GnTI CaSR ECD (closed circle, without l-Phe; open circle, in the presence of 10 mm l-Phe).

The Stability of CaSR ECDs

The stabilities of the purified ECDs were further investigated using immunoblots. Samples of the CaSR ECD from both 293-F and the HEK293S (GnTI) cells were kept at room temperature continuously for 7 days without any appreciable loss of protein from degradation as assessed by Western blots (Fig. 3, d and e). The proteins were subjected to stepwise increases in temperature to measure their thermal stability. The molar ellipticity signal was monitored from about 4 to 95 °C at 222 nm. As shown in Fig. 3c, the 293-F CaSR ECD demonstrated extraordinary thermal stability as the signal at the given wavelength did not change in this temperature range. The high mannose form of the CaSR ECD from HEK293 (GnTI) cells appeared to be slightly less stable with an increase in ellipticity at >92 °C. The cooperative unfolding transition further support the formation of a well packed core for the CaSR ECD as revealed by Trp emission fluorescence. The effect of calcium on the thermal stability was not determined due to precipitation of the protein at high temperature in the presence of calcium.

The Effect of Calcium Binding on CaSR ECDs

As shown in Fig. 3, a and b, the addition of Ca2+ leads to small changes in the secondary structure of CaSR ECDs as revealed by CD. However, the addition of Ca2+ could possibly induce more significant local conformational changes as probed by various spectroscopic methods.

Ca2+-induced conformational changes were probed by both Trp and ANS emission spectra (Figs. 4 and 5). Binding of Ca2+ resulted in a 2∼3-nm blue shift of the emission maxima of the Trp fluorescence spectra of both the 293-F CaSR ECD and the HEK293S (GnTI) CaSR ECD. Furthermore, a 20% decrease in the Trp fluorescence intensity of the CaSR ECD expressed in 293-F cells was observed upon addition of saturating amounts of Ca2+, whereas 14% decreases in the signal were shown in the case of the CaSR ECD expressed in HEK293S (GnTI) cells. The Kd of Ca2+ determined by Trp fluorescence changes of CaSR was 4.9 ± 0.3 and 5.4 ± 0.2 mm for 293-F CaSR ECD and GnTI CaSR ECD, respectively. The Hill coefficients obtained from the Trp fluorescence spectra were 1.3 ± 0.1 for 293-F CaSR ECD and 1.1 ± 0.1 for GnTI CaSR ECD, indicating the two protein variants differing in glycosylation may share similar Ca2+ binding capability (Fig. 4 and Table 2), although the Hill number obtained by this method is substantially lower than that obtained by functional assays (∼3–4).

FIGURE 5.

FIGURE 5.

Ca2+-induced changes in ANS fluorescence in CaSR ECDs. The ANS assay was performed in a buffer containing 40 μm ANS, 50 mm Tris-HCl, and 100 mm KCl, pH 7.4, with either 5 mm EGTA or 3 mm Ca2+. The excitation wavelength was set at 370 nm, and the emission spectra were acquired from 400 to 600 nm. The left panels show ANS fluorescence spectra of CaSR ECD in the presence (—) or absence of (- - -) 12 mm Ca2+. The spectrum of ANS alone is shown in gray. The right panels show the calcium titration curve fitted by Hill equation. a, 293-F CaSR ECD; b, GnTI CaSR ECD.

TABLE 2.

Summary of dissociation constants and Hill coefficients for CaSR ECDs

Proteins Trp spectrum
ANS spectrum
Kd Hill number Kd (with 10 mm l-Phe) Hill number (with 10 mm l-Phe) Kd (mm) Hill number
mm mm mm
293-F ECD 4.9 ± 0.3 1.4 ± 0.1 3.2 ± 0.1a 1.2 ± 0.1 3.8 ± 0.2 2.6 ± 0.2
GnTI ECD 5.4 ± 0.2 1.6 ± 0.1 3.4 ± 0.3a 1.1 ± 0.1 3.2 ± 0.1 2.3 ± 0.2

a p < 0.05.

ANS, a fluorescence probe extensively used for the detection and analysis of protein conformational changes, was applied to the study of the two proteins (42). Fig. 5 shows that addition of either form of the CaSR ECD resulted in a 30-nm blue shift of the spectra of ANS dye from 500 to 466 nm and a 10-fold increase in fluorescence intensity (Fig. 5). Such a blue shift of the emission spectrum and increase of the fluorescence intensity suggest that the fluorophore is located in less polar media (43).

Interestingly, Fig. 5 shows that Ca2+ also induced greater exposure to solvent of more hydrophobic regions in the complex oligosaccharide form of the ECD (293-F CaSR ECD) that was indicated by a 25% increase in the fluorescence signal intensity contrasting with the 10% change in intensity for the high mannose glycosylated form of the ECD expressed in HEK293S (GnTI) cells. The calcium-induced ANS fluorescence signal at 466 nm was also fitted by the Hill equation. The 293-F CaSR ECD had a Kd of 3.8 ± 0.2 mm, whereas GnTI CaSR ECD had a Kd value at 3.2 ± 0.1 mm. Their corresponding Hill coefficients calculated from the Ca2+-ANS titration curves were 2.6 ± 0.2 and 2.3 ± 0.2, respectively (Fig. 5 and Table 2). This approach, therefore, may sample more Ca2+-binding sites than the use of Trp fluorescence.

Due to their similarities in ionic radii and coordination chemistries, Tb3+ has been commonly used to probe Ca2+-binding sites as a trivalent Ca2+ analog. There are 12 Trp residues on the CaSR ECDs. According to the model structure of the CaSR ECD, several Trp residues are within 10 Å of these potential calcium-binding pockets, thus enabling aromatic residue-sensitized Tb3+-luminescence resonance energy transfer. Fig. 6 shows that titration of Tb3+ into a solution containing either of the two ECDs showed an enhanced luminescence resonance energy transfer (Fig. 6), consistent with Tb3+ binding in close proximity to the predicted calcium-binding sites. On the other hand, addition of calcium to the Tb3+-bound ECDs resulted in a decrease of the fluorescence signal indicating competition between the two ions (Fig. 7). The Tb3+ binding affinity for 293-F CaSR ECD was about 36.6 ± 0.4 μm with a Hill coefficient at 1.2 ± 0.1 suggesting a 1:1 binding mode of the interaction between Tb3+ and its binding pockets (Fig. 6). In terms of GnTI CaSR ECD, the Kd for Tb3+ was 31.8 ± 0.3 μm, which is comparable with the 293-F CaSR ECD. The Ca2+-Tb3+ competition assay yielded apparent dissociation constants for the ECDs, from which the binding constants for calcium can be deduced (Fig. 7). The Ca2+-binding dissociation constants calculated from the Ca2+-Tb3+ competition assay using Equation 2 for the 293-F CaSR ECD and the GnTI CaSR ECD were 3.7 ± 0.2 and 2.4 ± 0.2 mm, respectively, which are comparable with the Kd calculated from Ca2+-induced changes in native Trp signals as well as the ANS spectra.

FIGURE 6.

FIGURE 6.

Tb3+ titration curve of CaSR ECDs. Tb3+ titration curves of purified CaSR ECDs. The buffer for Tb3+ titration consisted of 20 mm PIPES, 135 mm NaCl, and 10 mm KCl, pH 6.8. A pH 6.8 was chosen to prevent formation of TbOH3 during titration. The arrow indicates the increase of the fluorescence. The titration curve was fitted using Hill equation. a, 293-F CaSR ECD; b, GnTI CaSR ECD.

FIGURE 7.

FIGURE 7.

Tb3+ competition assay of CaSR ECDs. Tb3+-Ca2+ competition assay of purified CaSR ECDs. The buffer for Tb3+ titration consisted of 20 mm PIPES, 135 mm NaCl, and 10 mm KCl, pH 6.8. The arrow indicates the decrease of the fluorescence. a, 293-F CaSR ECD; b, GnTI CaSR ECD.

Perturbations of NMR chemical shift can be used to monitor the interactions between metals and the protein. To ascertain whether those perturbations are occurring at the interacting interface of the ECD with its large protein size, we achieved specifically labeling of Phe residues with 15N in both mammalian expressed proteins with a yield of 4–5 and 0.9–1.0 mg/liter for 293F cells and GnTI cells, respectively (“Materials and Methods”). Both of the 15N-Phe-labeled proteins exhibited identical native dimer conformations similar to the unlabeled proteins (Fig. 2).

The low resolution of the peaks did not permit assignment of the chemical shifts of the high mannose form of the protein. Ca2+-induced protein conformational change could be observed in the one-dimensional NMR when Ca2+ was titrated into the 15N-l-Phe-labeled 293-F CaSR ECD (Fig. 8). The Ca2+-induced changes in two-dimensional NMR could be evaluated using 293-F CaSR ECD. As shown in Fig. 9, during the titration with Ca2+, a progressive disappearance of the amide signals at 8.05 ppm was accompanied by the concomitant emergence of a new set of peaks at 7.85 ppm as well as a chemical shift between the amide signals at 7.95 and 8.21 ppm (Fig. 9, a–c) indicating a complex response to Ca2+ binding. The low expression yield and dispersion of the 15N-Phe-labeled GnTI CaSR ECD with high mannose form prevented us from further studies using NMR.

FIGURE 8.

FIGURE 8.

Ca2+ titration of CaSR ECD monitored by 1H NMR. 15N-filtered 1H NMR spectra of CaSR ECDs in D2O and a solution of 10 mm Tris, pH 7.4. Ca2+-induced chemical shift changes in 293-F CaSR ECD were observed at resonances in the main chain amide proton region, such as 7.7 and 7.0 ppm.

FIGURE 9.

FIGURE 9.

1H,15N-HSQC spectra of 293-F CaSR ECD. The 1H,15N-HSQC spectra of CaSR ECDs was obtained in D2O and a solution of 10 mm Tris, pH 7.4. Left panel, Ca2+-induced chemical shift changes of 293-F CaSR ECD. Red, 293-F CaSR ECD without addition of Ca2+; orange, 1 mm Ca2+; yellow, 3 mm Ca2+; green, 5 mm Ca2+; cyan, 10 mm Ca2+. Middle panel, zoomed in view of each peak. Right panel, the normalized chemical shifts from peaks b and c were plotted against the calcium concentration and further fitted by the Hill equation.

The chemical shifts of the peaks were further plotted as calcium concentration-response curves as shown in Fig. 9 (right panel). The calcium-induced chemical shift changes at 8.18 and 7.96 ppm with intermediate and fast exchanges in Fig. 9b could be well fitted by the Hill equation assuming formation of a 1:1 ligand-protein complex with a Kd of 1.1 mm (Fig. 9, upper right panel). On other hand, analysis of the peaks in Fig. 9a suggests a slow exchange process in which the exchange rates of the bound and unbound conformations were slower than the change in amide chemical shifts in frequency units. The chemical shift of the peaks in Fig. 9c can be plotted into a Ca2+ concentration-response curve with a Kd at 2.5 mm and a Hill coefficient of 2.5, which suggests more than one ligand-binding site, and similar to the values obtained using the ANS assay.

l-Phe Modulated the Binding of Ca2+ to CaSR by Directly Interacting with the CaSR ECDs

Direct evidence demonstrating the interaction between this amino acid with the CaSR ECD is difficult to achieve due to the dynamic binding process, weak binding affinity, and sample limitation. We have applied STD NMR, a widely used NMR technique, to facilitate the exploration of low affinity protein-ligand interactions (10−8∼10−3) due to the fact that it detects the signals from the ligands via saturation transfer between the protein protons and the ligand protons (44). Only small amounts of non-labeled proteins or macromolecules are required. As shown in Fig. 10a, we observed an intense proton signal around downfield 7.2 ppm that increased upon addition of 1 mm l-Phe (green line), which corresponds to the characteristic 1H-labeled l-Phe NMR spectrum. The three major peaks in the STD spectrum of l-Phe (red line) are from the protein signal from the ECD of CaSR. The STD-AF signal obtained by integrating each peak was plotted against the l-Phe concentration and was further fitted to the Hill equation (Fig. 10, b and c). A lower STD-AF signal was observed from interaction of the amino acid, l-Asp, with the protein (Fig. 10e), which was correlated with the weaker capacity of l-Asp to activate the receptor compared with l-Phe in intact cells (12). These spectra provide direct evidence to support the earlier hypothesis that l-Phe can bind to the extracellular domain of the calcium-sensing receptor with a Kd at 10.2 mm and a Hill coefficient of 1.4 (Fig. 10, b and c). Quantification of the STD-AF signal indicated that the binding constant of l-Phe to the GnTI CaSR ECD was decreased to 4.6 mm with a Hill coefficient of 1.8 in the presence of 3.2 mm calcium, which is the calculated Kd of GnTI CaSR ECD for calcium. We also demonstrated in the current study that addition of 10 mm l-Phe also decreased the Kd values for the binding of calcium to the 293-F ECD and the GnTI-ECD from 4.9 ± 0.3 to 3.2 ± 0.3 mm and 5.4 ± 0.2 to 3.4 ± 0.3 mm, respectively (Fig. 4, c and d). These results suggest that the interaction between Ca2+ and the receptor may influence the binding between l-Phe and the CaSR ECD and vice versa (Fig. 10, c and d).

FIGURE 10.

FIGURE 10.

Monitoring the ligand-protein interaction via STD NMR. a, 1H NMR spectra of a solution of 20 μm GnTI CaSR ECD in D2O and 10 mm Tris, pH 7.8, without (blue line) or with (green line) 1 mm l-Phe. The difference between spectra at on and off resonance (STD) was shown in red line. The region between 7.35 and 6.95 ppm is zoomed in for further analysis in b–d. b, difference between spectra at on and off resonances upon binding of l-Phe at a series of concentrations. The integration of individual peaks was calculated during the l-Phe titration and further used for calculation of the STD amplification factor (STD-AF) in c and d. c, the average STD-AF from the integrated signal of three major peaks was calculated using Equation 5 during l-Phe titration, and was further plotted against increased l-Phe concentration and further fitted using the Hill equation (open circle, without 3.2 mm Ca2+; closed circle, with 3.2 mm Ca2+). d, upper panel, the STD signal spectra of 5 mm l-Phe in the presence of 20 μm of GnTI CaSR ECD with (blue) or without 3.2 mm Ca2+ (red). Lower panel, the STD signal spectra of 3 mm l-Asp in the presence of 2.5 mm Ca2+ or absence of Ca2+.

DISCUSSION

The Secreted CaSR ECD Variants Maintain Native-like Structural Properties

In the present study, we were able to purify CaSR ECDs from both a wild type mammalian expression host using 293-F cells, to generate complex type N-glycan structures, as well as from the HEK293S (GnTI) cell line, to produce high mannose N-glycans on recombinant products. In both of the two host cell systems, the target proteins were secreted into the culture media due to the presence of a signal peptide at the beginning of the ECD sequence. We have performed several studies to support the conclusion that the secreted ECD variants with different types of glycosylation maintain their native structural and functional properties. First, the secreted ECD proteins containing either the complex or high mannose glycans both appear to form dimers in the culture medium (Fig. 2) consistent with the fact that CaSR functions as a dimer on the cell surface (45).

Second, the secreted recombinant CaSR ECD containing complex glycosylation is able to bind to RCA-I beads and is susceptible to cleavage with PNGase F. Similar data were obtained for the Endo-F1 cleavage of the high mannose N-glycans from the ECD produced in HEK293S (GnTI) cells under native conditions (Fig. 2f). The above evidence suggests that the secreted proteins from the mammalian cell lines maintain their glycosylated characteristics.

Third, far-UV CD analysis of the two glycosylated forms of CaSR suggests that both have similar secondary structure contents, with 52–58% α helical contents and 17–25% β-sheet contents. These results are consistent with the modeled structure based on the crystal structure of the mGluR1 (Table 1) (46, 47).

The well formed tertiary structure with a hydrophobic core of the secreted ECD of CaSR was revealed by a Trp emission maximum at 332 nm (Fig. 4). The highly stable ECD protein with complex-type saccharides was able to maintain its secondary structure at high temperature (>90 °C), whereas the CaSR ECD with its high mannose glycans was slightly less stable, exhibiting cooperative thermal unfolding. Such strong thermal stability and unfolding behavior are likely due to the formation of a stable hydrophobic core and the existence of well formed, multiple disulfide bonds in the CaSR ECD (48).

Ca2+ Directly Interacts with the Extracellular Domain of CaSR

We have used various spectroscopic methods to demonstrate the capacities of Ca2+ and Phe to bind to the ECD variants of CaSR studied here (Figs. 4, 5, and 810). As summarized in Tables 2 and 3, both variants exhibit similar Ca2+ binding despite the different methods that were employed.

TABLE 3.

Summary of the Tb3+ FRET assay

Proteins Tb3+ titration
Kd, Ca (mm) from Tb3+ competition (μm)
Kd Hill number Kd Hill number
μm mm
293-F ECD 36.6 ± 0.4 1.2 ± 0.1 3.7 ± 0.2 1.8 ± 0.1
GnTI ECD 31.8 ± 0.3 1.3 ± 0.2 2.4 ± 0.2 1.6 ± 0.1

The Kd values for the interactions of Ca2+ with the ECDs that were monitored by intrinsic Trp florescence were 4.9 ± 0.3 and 5.4 ± 0.2 mm for the ECDs from 293-F and GnTI cells, respectively. The Kd values based on ANS florescence enhancement were 3.8 ± 0.2 and 3.2 ± 0.1 mm for the ECDs from the same respective cell lines. The Ca2+-Kd values based on Tb3+ competition in FRET analysis were 3.7 ± 0.2 and 2.4 ± 0.2 mm for 293-F and GnTI cells, respectively, and similar millimolar binding constants were determined from chemical shifts in NMR spectra. These data indicate that Ca2+ can bind to the ECD of CaSR with a Kd in the millimolar range and that the alterations in glycosylation do not significantly alter the binding of Ca2+ to the ECD.

Functional studies of the CaSR in cells as well as our previous metal-binding studies using grafting approaches have demonstrated that the CaSR likely has multiple Ca2+-binding sites (49). The Hill coefficients of both the 293-F and GnTI CaSR ECDs calculated from calcium-induced ANS spectral changes (2.3–2.6) were also in agreement with the multiple Ca2+-binding modes. However, the intrinsic tryptophan spectral changes during the Ca2+ titration indicated mono- to biphasic binding of Ca2+ to CaSR with Hill coefficients in the range of 1.4–1.6. The discrepancy might be attributed to differences in the principles underlying the experiments. 7 of 10 tryptophan residues in the CaSR ECD are predicted to be located in lobe 2. Of all of these 10 Trp residues, two of them (Trp70 and Trp299) are within 10 Å of calcium-binding site 1. Although Trp208 is close to calcium-binding site 3 (∼10 Å) and Trp352 is nearby calcium sites 4 and 5 (<10 Å), both of which are more than 20 Å from site 1. Thus, the “sampling” of site 1 by Trp fluorescence may be more efficient than that of the others because site 1 may produce signals arising from 2 Trp, whereas the other sites are only close to one Trp each. Future studies could utilize site-directed mutagenesis of sites 1–5 to determine which one(s) contribute most to Ca2+-induced changes in Trp fluorescence and the other spectroscopic methods used here to assess Ca2+ binding.

In previous studies from our lab, CaSR ECD subdomain 1, which includes predicted Ca2+-binding sites 1, 2, and 3, showed biphasic binding processes when titrated with Tb3+, whereas subdomain 2 (including Ca2+-binding sites 2 and 3) and subdomain 3 (including Ca2+-binding sites 4 and 5) had monophasic responses to Tb3+. However, in the present studies, the Tb3+ concentration-response curve for the 293-F and GnTI CaSR ECDs did not show observable cooperative binding. This could possibly be due to the fact that in the grafting approaches, the subdomains were not constrained by the additional structural conformations that might be present when they are in the intact ECD structure. Concomitantly, the CaSR ECDs had much stronger binding affinities for Tb3+ than Ca2+ with Kd values at the micromolar range. Thus, the differences of ligand binding capacity between potentially weak metal-binding sites may not be detected. Moreover, intensive FRET signals between Tb3+ and more than one Trp residue in the intact ECD, as for site 1, might produce a strong signal that could obscure possible cooperativity among these metal-binding sites. On the contrary, fitting the data from the ANS assay resulted in Hill coefficients of >2. These data indicate that the ANS assay may provide a more effective means of capturing both local and global conformational changes in CaSR ECDs resulting from Ca2+ interacting with multiple binding sites. These results from the ANS assay are in accordance with the observed multiple binding states from NMR spectra as shown in Fig. 9. Thus the different methods used here to assess Ca2+ binding to the two forms of the ECD studied here may differ in their capacity to “capture” cooperativity between Ca2+-binding sites. This might be the result of differences in their capacities to detect and “sample” the various predicted and other possible Ca2+-binding sites within the ECD to an equivalent extent. Studies in intact cells, in contrast, integrate the overall signal resulting from cooperative binding of Ca2+ to its various sites in the ECD and perhaps elsewhere.

Dynamic Interaction of l-Phe to CaSR

Several studies from our laboratory and others have shown that l-Phe potentiates intracellular Ca2+ oscillations and other responses using site-directed mutagenesis and functional studies with HEK293 cells expressing the CaSR (12, 24, 27, 50). In vivo studies suggest that a minimum of 1 mm calcium is required in extracellular buffers to detect the l-Phe-triggered changes in intracellular Ca2+ concentration (15). Although the Phe-binding site of CaSR has been proposed to be located on the ECD, direct binding of Phe to CaSR has never been reported. In the present study we confirmed a direct interaction between the extracellular domain and this CaSR allosteric regulator in the absence of Ca2+ using the STD NMR techniques with a binding affinity of 10.1 mm and a Hill coefficient of 1.4. Because l-Phe activates CaSR through signaling pathways in addition to [Ca2+]i signaling, the difference between the binding constant of l-Phe determined here and its EC50 in intact cells might be attributable, at least in part, to the synergistic effect of multiple downstream effects in cells (15, 51).

l-Phe and Ca2+ Mutually Facilitated Each Others Interaction with the CaSR ECD

Several studies in intact cells have revealed that the EC50 of CaSR for binding of extracellular Ca2+ could be reduced from 4.0 to 2.5 mm in the presence of l-Phe (12, 24). Here, we demonstrated that l-Phe also increased the binding affinity of Ca2+ to the CaSR ECD measured directly using spectroscopic methods. Namely, 10 mm l-Phe reduced the Kd values for Ca2+ binding from 4.9 ± 0.3 to 3.2 ± 0.3 mm for 293-F ECD and from 5.4 ± 0.2 to 3.4 ± 0.3 mm for GnTI-ECD (Fig. 4, c and d).

Meanwhile, the presence of Ca2+ also increased the binding affinity of l-Phe to CaSR ECD, reducing the Kd from 10.2 to 4.6 mm. Similarly, functional studies carried out by Conigrave et al. (12) in intact cells demonstrated that the half-maximal effect of l-Phe (EC50) was 3.5 mm in the presence of Ca2+. These results provide evidence that potentiation of the activity of CaSR by l-Phe is at least partially exerted through its direct interaction with the extracellular domain. The intensity of the l-Phe STD signal was decreased in the presence of Ca2+ compared with that in the absence of Ca2+. It is possible that conformation of the ECD was altered upon binding Ca2+ so that it can better accommodate l-Phe. Thus, the proton signal from l-Phe was not reflected as a simple additive effect on the STD spectrum when Ca2+ was added in the system. It is also possible that the agonist-induced change in receptor conformation involves intermolecular reorientation of the receptor at the dimer interface. In fact, in the case of the crystal structures of mGluR1(PDB codes 1EWT, 1EWK, and 1ISR), binding of glutamate produced not only domain closure but also a small shift of an α helix at the dimer interface along with a substantial rotation around the axis between the two ECDs (52).

Ligand-induced Conformational Changes of the ECD of CaSR

Ca2+-induced conformational changes in the intact CaSR ECD were observed in both fluorescence and NMR spectra. There are seven tryptophan residues on the ECD, and among these are four that are proposed to be on the molecular surface between lobes 1 and 2. As Ca2+ bound to the protein, the polarity surrounding the tryptophan residues increased leading to a decreased fluorescence signal from the emission spectra. On the other hand, the signal from the ANS spectrum increased upon titration of Ca2+ suggesting the presence of ligand-induced exposure of more hydrophobic regions of the protein to interact with the ANS probe. The increase in the Ca2+-induced ANS signal of the 293-F CaSR ECD was larger than that observed with the GnTI CaSR ECD, which indicates that glycans on the 293-F CaSR ECD might contribute to the changes in hydrophobicity of the protein triggered by Ca2+.

Calcium-induced alterations in conformation were also monitored by NMR chemical shift changes using uniform 15N Phe-labeled 293-F CaSR ECD (Fig. 9). Chemical shifts of several Phe residues displayed differential behavior upon addition of calcium, indicating alterations in the local environments around these Phe residues. There are more than 30 phenylalanine residues in the ECD of CaSR; however, a limited number of peaks were detected using 900 MHz NMR, which precluded further assignment. Currently, we are working on labeling and assignment strategies to enable further structural studies by high resolution NMR.

The observed ligand-induced conformational changes of the CaSR ECD are fundamental initial signals that initiate intracellular signaling via multiple downstream molecules leading to the regulation of parathyroid hormone secretion and numerous other biological processes. Such interactions are likely to be shared by other members of family C of the GPCRs. Several research articles have reported ligand bound forms and unliganded forms of mGluRs, showing alterations in the bi-lobed protomer architecture between the active and resting status through modulation of the dimeric interface through a packed α-helical structure (47, 52, 53). Ligands stabilize mGluR1 in the active form by keeping the closed bi-lobed receptor structure as the dominant state in dynamic equilibrium (47). Interestingly, our previous work also elucidated a potential Ca2+-binding site adjacent to the glutamate-binding site located at the hinge region of the ECD of mGluR1 (28). Overall, the present study correlates well with observations from in vivo studies in intact cells using an intracellular Ca2+ readout (24), and will provide further insights into the structural underpinnings of agonist-induced functions of the CaSR. This work should also permit further studies to define the key residues on the receptor involved in the interaction with ligands, including cations (e.g. Ca2+), nutrients such as amino acids, as well as antibiotics. This information will be crucial to understanding how the CaSR responds to variety of stimuli and may pave the way for future studies of other members of family C of the GPCRs.

Acknowledgments

We are extremely grateful to Dr. Jingjuan Qiao and Dr. Yanyi Chen in Dr. Jenny Yang's lab and Dr. John Glushka in Dr. James H. Prestegard's lab for their great suggestions and providing protocols for experiments.

*

This work was supported, in whole or in part, by National Institutes of Health Grants GM081749 and EB007268 (to J. J. Y.), P41GM103390 (to K. W. M.), National Institutes of Health Instrumentation Grant S10RR027097 (to J. H. P.), a Center for Diagnostics and Therapeutics fellowship (to C. Z.), and funds from the Georgia Research Alliance.

3
The abbreviations used are:
CaSR
calcium-sensing receptor
ECD
extracellular domain
STD
saturation transfer difference
GnTI
GlcNAc transferase I
PNGase F
peptide:N-glycosidase F
Endo F1
endoglycosidase F1
ANS
8-anilino-1-naphthalenesulfonic acid
HSQC
heteronuclear single quantum coherence
mGluR1
metabotropic glutamate receptor 1
GnTI
GlcNAc transferase I
BAPTA
1,2-bis(2-aminophenoxyl)ethane-N,N,N′,N′-tetraacetic acid.

REFERENCES

  • 1. Brown E. M., Pollak M., Hebert S. C. (1998) The extracellular calcium-sensing receptor: its role in health and disease. Annu. Rev. Med. 49, 15–29 [DOI] [PubMed] [Google Scholar]
  • 2. Brown E. M., Gamba G., Riccardi D., Lombardi M., Butters R., Kifor O., Sun A., Hediger M. A., Lytton J., Hebert S. C. (1993) Cloning and characterization of an extracellular Ca2+-sensing receptor from bovine parathyroid. Nature 366, 575–580 [DOI] [PubMed] [Google Scholar]
  • 3. Brown E. M., MacLeod R. J. (2001) Extracellular calcium sensing and extracellular calcium signaling. Physiol. Rev. 81, 239–297 [DOI] [PubMed] [Google Scholar]
  • 4. Tfelt-Hansen J., Brown E. M. (2005) The calcium-sensing receptor in normal physiology and pathophysiology: a review. Crit. Rev. Clin. Lab. Sci. 42, 35–70 [DOI] [PubMed] [Google Scholar]
  • 5. Tfelt-Hansen J., Schwarz P., Brown E. M., Chattopadhyay N. (2003) The calcium-sensing receptor in human disease. Front. Biosci. 8, s377–390 [DOI] [PubMed] [Google Scholar]
  • 6. Conigrave A. D., Franks A. H., Brown E. M., Quinn S. J. (2002) l-Amino acid sensing by the calcium-sensing receptor: a general mechanism for coupling protein and calcium metabolism? Eur. J. Clin. Nutr. 56, 1072–1080 [DOI] [PubMed] [Google Scholar]
  • 7. Chattopadhyay N., Vassilev P. M., Brown E. M. (1997) Calcium-sensing receptor: roles in and beyond systemic calcium homeostasis. Biol. Chem. 378, 759–768 [PubMed] [Google Scholar]
  • 8. Cheng I., Klingensmith M. E., Chattopadhyay N., Kifor O., Butters R. R., Soybel D. I., Brown E. M. (1998) Identification and localization of the extracellular calcium-sensing receptor in human breast. J. Clin. Endocrinol. Metab. 83, 703–707 [DOI] [PubMed] [Google Scholar]
  • 9. Chang W., Tu C., Chen T. H., Komuves L., Oda Y., Pratt S. A., Miller S., Shoback D. (1999) Expression and signal transduction of calcium-sensing receptors in cartilage and bone. Endocrinology 140, 5883–5893 [DOI] [PubMed] [Google Scholar]
  • 10. Yazici D., Özben B., Yavuz D., Deyneli O., Aydin H., Tarcin Ö., Akalin S. (2011) Epicardial adipose tissue thickness in type 1 diabetic patients. Endocrine 40, 250–255 [DOI] [PubMed] [Google Scholar]
  • 11. Riccardi D. (2002) Wellcome Prize Lecture: Cell surface, ion-sensing receptors. Exp. Physiol. 87, 403–411 [DOI] [PubMed] [Google Scholar]
  • 12. Conigrave A. D., Quinn S. J., Brown E. M. (2000) l-Amino acid sensing by the extracellular Ca2+-sensing receptor. Proc. Natl. Acad. Sci. U.S.A. 97, 4814–4819 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 13. Quinn S. J., Ye C. P., Diaz R., Kifor O., Bai M., Vassilev P., Brown E. (1997) The Ca2+-sensing receptor: a target for polyamines. Am. J. Physiol. 273, C1315–C1323 [DOI] [PubMed] [Google Scholar]
  • 14. Brown E. M., Katz C., Butters R., Kifor O. (1991) Polyarginine, polylysine, and protamine mimic the effects of high extracellular calcium concentrations on dispersed bovine parathyroid cells. J. Bone Miner. Res. 6, 1217–1225 [DOI] [PubMed] [Google Scholar]
  • 15. Breitwieser G. E. (2006) Calcium sensing receptors and calcium oscillations: calcium as a first messenger. Curr. Top. Dev. Biol. 73, 85–114 [DOI] [PubMed] [Google Scholar]
  • 16. Conigrave A. D., Quinn S. J., Brown E. M. (2000) Cooperative multi-modal sensing and therapeutic implications of the extracellular Ca2+ sensing receptor. Trends Pharmacol. Sci. 21, 401–407 [DOI] [PubMed] [Google Scholar]
  • 17. Ray K., Clapp P., Goldsmith P. K., Spiegel A. M. (1998) Identification of the sites of N-linked glycosylation on the human calcium receptor and assessment of their role in cell surface expression and signal transduction. J. Biol. Chem. 273, 34558–34567 [DOI] [PubMed] [Google Scholar]
  • 18. Garrett J. E., Capuano I. V., Hammerland L. G., Hung B. C., Brown E. M., Hebert S. C., Nemeth E. F., Fuller F. (1995) Molecular cloning and functional expression of human parathyroid calcium receptor cDNAs. J. Biol. Chem. 270, 12919–12925 [DOI] [PubMed] [Google Scholar]
  • 19. Magno A. L., Ingley E., Brown S. J., Conigrave A. D., Ratajczak T., Ward B. K. (2011) Testin, a novel binding partner of the calcium-sensing receptor, enhances receptor-mediated Rho-kinase signalling. Biochem. Biophys. Res. Commun. 412, 584–589 [DOI] [PubMed] [Google Scholar]
  • 20. Goldsmith P. K., Fan G. F., Ray K., Shiloach J., McPhie P., Rogers K. V., Spiegel A. M. (1999) Expression, purification, and biochemical characterization of the amino-terminal extracellular domain of the human calcium receptor. J. Biol. Chem. 274, 11303–11309 [DOI] [PubMed] [Google Scholar]
  • 21. Ryan Z. C., Craig T. A., Venyaminov S. Y., Thompson J. R., Kumar R. (2006) Biophysical properties of the extra-cellular domain of the calcium-sensing receptor. Biochem. Biophys. Res. Commun. 349, 339–344 [DOI] [PubMed] [Google Scholar]
  • 22. Huang Y., Zhou Y., Castiblanco A., Yang W., Brown E. M., Yang J. J. (2009) Multiple Ca2+-binding sites in the extracellular domain of the Ca2+-sensing receptor corresponding to cooperative Ca2+ response. Biochemistry 48, 388–398 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 23. Huang Y., Zhou Y., Yang W., Butters R., Lee H. W., Li S., Castiblanco A., Brown E. M., Yang J. J. (2007) Identification and dissection of Ca2+-binding sites in the extracellular domain of Ca2+-sensing receptor. J. Biol. Chem. 282, 19000–19010 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 24. Zhang C., Huang Y., Jiang Y., Mulpuri N., Wei L., Hamelberg D., Brown E. M., Yang J. J. (2014) Identification of an l-phenylalanine binding site enhancing the cooperative responses of the calcium-sensing receptor to calcium. J. Biol. Chem. 289, 5296–5309 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 25. Rey O., Young S. H., Yuan J., Slice L., Rozengurt E. (2005) Amino acid-stimulated Ca2+ oscillations produced by the Ca2+-sensing receptor are mediated by a phospholipase C/inositol 1,4,5-trisphosphate-independent pathway that requires G12, Rho, filamin-A, and the actin cytoskeleton. J. Biol. Chem. 280, 22875–22882 [DOI] [PubMed] [Google Scholar]
  • 26. Young S. H., Rozengurt E. (2002) Amino acids and Ca2+ stimulate different patterns of Ca2+ oscillations through the Ca2+-sensing receptor. Am. J. Physiol. Cell Physiol. 282, C1414–C1422 [DOI] [PubMed] [Google Scholar]
  • 27. Zhang Z., Qiu W., Quinn S. J., Conigrave A. D., Brown E. M., Bai M. (2002) Three adjacent serines in the extracellular domains of the CaR are required for l-amino acid-mediated potentiation of receptor function. J. Biol. Chem. 277, 33727–33735 [DOI] [PubMed] [Google Scholar]
  • 28. Jiang Y., Huang Y., Wong H. C., Zhou Y., Wang X., Yang J., Hall R. A., Brown E. M., Yang J. J. (2010) Elucidation of a novel extracellular calcium-binding site on metabotropic glutamate receptor 1α (mGluR1α) that controls receptor activation. J. Biol. Chem. 285, 33463–33474 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 29. Reeves P. J., Callewaert N., Contreras R., Khorana H. G. (2002) Structure and function in rhodopsin: high-level expression of rhodopsin with restricted and homogeneous N-glycosylation by a tetracycline-inducible N-acetylglucosaminyltransferase I-negative HEK293S stable mammalian cell line. Proc. Natl. Acad. Sci. U.S.A. 99, 13419–13424 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 30. Kornfeld R., Kornfeld S. (1985) Assembly of asparagine-linked oligosaccharides. Annu. Rev. Biochem. 54, 631–664 [DOI] [PubMed] [Google Scholar]
  • 31. Schachter H. (1986) Biosynthetic controls that determine the branching and microheterogeneity of protein-bound oligosaccharides. Biochem. Cell Biol. 64, 163–181 [DOI] [PubMed] [Google Scholar]
  • 32. Robertson M. A., Etchison J. R., Robertson J. S., Summers D. F., Stanley P. (1978) Specific changes in the oligosaccharide moieties of VSV grown in different lectin-resistnat CHO cells. Cell 13, 515–526 [DOI] [PubMed] [Google Scholar]
  • 33. Meng L., Forouhar F., Thieker D., Gao Z., Ramiah A., Moniz H., Xiang Y., Seetharaman J., Milaninia S., Su M., Bridger R., Veillon L., Azadi P., Kornhaber G., Wells L., Montelione G. T., Woods R. J., Tong L., Moremen K. W. (2013) Enzymatic basis for N-glycan sialylation: structure of rat α2,6-sialyltransferase (ST6GAL1) reveals conserved and unique features for glycan sialylation. J. Biol. Chem. 288, 34680–34698 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 34. Maniccia A. W., Yang W., Li S. Y., Johnson J. A., Yang J. J. (2006) Using protein design to dissect the effect of charged residues on metal binding and protein stability. Biochemistry 45, 5848–5856 [DOI] [PubMed] [Google Scholar]
  • 35. Claridge T. (2009) MNova: NMR data processing, analysis, and prediction software. J. Chem. Inf. Model 49, 1136–1137 [DOI] [PubMed] [Google Scholar]
  • 36. Delaglio F., Grzesiek S., Vuister G. W., Zhu G., Pfeifer J., Bax A. (1995) NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J. Biomol. NMR 6, 277–293 [DOI] [PubMed] [Google Scholar]
  • 37. Monleón D., Colson K., Moseley H. N., Anklin C., Oswald R., Szyperski T., Montelione G. T. (2002) Rapid analysis of protein backbone resonance assignments using cryogenic probes, a distributed Linux-based computing architecture, and an integrated set of spectral analysis tools. J. Struct. Funct. Genomics 2, 93–101 [DOI] [PubMed] [Google Scholar]
  • 38. Huang Y., Zhou Y., Wong H. C., Castiblanco A., Chen Y., Brown E. M., Yang J. J. (2010) Calmodulin regulates Ca2+-sensing receptor-mediated Ca2+ signaling and its cell surface expression. J. Biol. Chem. 285, 35919–35931 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 39. Viegas A., Manso J., Corvo M. C., Marques M. M., Cabrita E. J. (2011) Binding of ibuprofen, ketorolac, and diclofenac to COX-1 and COX-2 studied by saturation transfer difference NMR. J. Med. Chem. 54, 8555–8562 [DOI] [PubMed] [Google Scholar]
  • 40. Tretter V., Altmann F., März L. (1991) Peptide-N4-(N-acetyl-β-glucosaminyl)asparagine amidase F cannot release glycans with fucose attached α1–3 to the asparagine-linked N-acetylglucosamine residue. Eur. J. Biochem. 199, 647–652 [DOI] [PubMed] [Google Scholar]
  • 41. Trimble R. B., Tarentino A. L. (1991) Identification of distinct endoglycosidase (endo) activities in Flavobacterium meningosepticum: endo F1, endo F2, and endo F3: Endo F1 and endo H hydrolyze only high mannose and hybrid glycans. J. Biol. Chem. 266, 1646–1651 [PubMed] [Google Scholar]
  • 42. Slavík J. (1982) Anilinonaphthalene sulfonate as a probe of membrane composition and function. Biochim. Biophys. Acta 694, 1–25 [DOI] [PubMed] [Google Scholar]
  • 43. Schonbrunn E., Eschenburg S., Luger K., Kabsch W., Amrhein N. (2000) Structural basis for the interaction of the fluorescence probe 8-anilino-1-naphthalene sulfonate (ANS) with the antibiotic target MurA. Proc. Natl. Acad. Sci. U.S.A. 97, 6345–6349 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 44. Streiff J. H., Juranic N. O., Macura S. I., Warner D. O., Jones K. A., Perkins W. J. (2004) Saturation transfer difference nuclear magnetic resonance spectroscopy as a method for screening proteins for anesthetic binding. Mol. Pharmacol. 66, 929–935 [DOI] [PubMed] [Google Scholar]
  • 45. Bai M., Trivedi S., Brown E. M. (1998) Dimerization of the extracellular calcium-sensing receptor (CaR) on the cell surface of CaR-transfected HEK293 cells. J. Biol. Chem. 273, 23605–23610 [DOI] [PubMed] [Google Scholar]
  • 46. Bai M. (2004) Structure-function relationship of the extracellular calcium-sensing receptor. Cell Calcium 35, 197–207 [DOI] [PubMed] [Google Scholar]
  • 47. Kunishima N., Shimada Y., Tsuji Y., Sato T., Yamamoto M., Kumasaka T., Nakanishi S., Jingami H., Morikawa K. (2000) Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor. Nature 407, 971–977 [DOI] [PubMed] [Google Scholar]
  • 48. Fan G. F., Ray K., Zhao X. M., Goldsmith P. K., Spiegel A. M. (1998) Mutational analysis of the cysteines in the extracellular domain of the human Ca2+ receptor: effects on cell surface expression, dimerization and signal transduction. FEBS Lett. 436, 353–356 [DOI] [PubMed] [Google Scholar]
  • 49. Bai M., Quinn S., Trivedi S., Kifor O., Pearce S. H., Pollak M. R., Krapcho K., Hebert S. C., Brown E. M. (1996) Expression and characterization of inactivating and activating mutations in the human Ca2+o-sensing receptor. J. Biol. Chem. 271, 19537–19545 [DOI] [PubMed] [Google Scholar]
  • 50. Mun H. C., Culverston E. L., Franks A. H., Collyer C. A., Clifton-Bligh R. J., Conigrave A. D. (2005) A double mutation in the extracellular Ca2+-sensing receptor's Venus flytrap domain that selectively disables l-amino acid sensing. J. Biol. Chem. 280, 29067–29072 [DOI] [PubMed] [Google Scholar]
  • 51. Rey O., Young S. H., Papazyan R., Shapiro M. S., Rozengurt E. (2006) Requirement of the TRPC1 cation channel in the generation of transient Ca2+ oscillations by the calcium-sensing receptor. J. Biol. Chem. 281, 38730–38737 [DOI] [PubMed] [Google Scholar]
  • 52. Tsuchiya D., Kunishima N., Kamiya N., Jingami H., Morikawa K. (2002) Structural views of the ligand-binding cores of a metabotropic glutamate receptor complexed with an antagonist and both glutamate and Gd3+. Proc. Natl. Acad. Sci. U.S.A. 99, 2660–2665 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 53. Muto T., Tsuchiya D., Morikawa K., Jingami H. (2007) Structures of the extracellular regions of the group II/III metabotropic glutamate receptors. Proc. Natl. Acad. Sci. U.S.A. 104, 3759–3764 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 54. Liu S., Venot A., Meng L., Tian F., Moremen K.W., Boons G.-J., Prestegard J.H. (2007) Spin-labeled analogs of CMP-NeuAc as NMR probes of the α-2,6-sialyltransferase ST6Gal I. Chem. Biol. 14, 409–418 [DOI] [PMC free article] [PubMed] [Google Scholar]

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