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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2014 Nov 26;70(Pt 12):o1287. doi: 10.1107/S1600536814025100

Crystal structure of ethyl 4-[(1H-pyrazol-1-yl)meth­yl]benzoate

Ju-Xian Wang a, Chao Feng b,*
PMCID: PMC4257449  PMID: 25553050

Abstract

In the title mol­ecule, C13H14N2O2, the dihedral angle between the pyrazole and benzene ring mean planes is 76.06 (11)°, and the conformation of the ethyl side chain is anti [C—O—C—C = −175.4 (3)°]. In the crystal, the only directional inter­actions are very weak C—H ⋯π inter­actions involving both the pyrazole and benzene rings, leading to the formation of a three-dimensional network.

Keywords: crystal structure, ester, pyrazole derivative

Related literature  

For a related structure, see: Dong et al. (2011). For background to the properties of pyrazole derivatives, see: Adnan & Tarek (2004); Ashraf et al. (2003).graphic file with name e-70-o1287-scheme1.jpg

Experimental  

Crystal data  

  • C13H14N2O2

  • M r = 230.26

  • Triclinic, Inline graphic

  • a = 8.1338 (12) Å

  • b = 8.1961 (9) Å

  • c = 10.7933 (11) Å

  • α = 74.013 (9)°

  • β = 83.308 (10)°

  • γ = 64.734 (13)°

  • V = 625.54 (13) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 293 K

  • 0.22 × 0.20 × 0.18 mm

Data collection  

  • Agilent SuperNova (Single source at offset, Eos) diffractometer

  • Absorption correction: multi-scan (CrysAlis RED; Agilent, 2012) T min = 0.982, T max = 0.985

  • 4295 measured reflections

  • 2197 independent reflections

  • 1639 reflections with I > 2σ(I)

  • R int = 0.032

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.067

  • wR(F 2) = 0.201

  • S = 1.15

  • 2197 reflections

  • 155 parameters

  • H-atom parameters constrained

  • Δρmax = 0.18 e Å−3

  • Δρmin = −0.23 e Å−3

Data collection: FRAMBO (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536814025100/hb7319sup1.cif

e-70-o1287-sup1.cif (16.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814025100/hb7319Isup2.hkl

e-70-o1287-Isup2.hkl (108KB, hkl)

Supporting information file. DOI: 10.1107/S1600536814025100/hb7319Isup3.cml

. DOI: 10.1107/S1600536814025100/hb7319fig1.tif

The mol­ecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level.

b . DOI: 10.1107/S1600536814025100/hb7319fig2.tif

View of the packing diagram of the title compound along the b axis.

CCDC reference: 1034364

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (, ).

Cg1 and Cg2 are the centroids of the N1/N2/C1C3 and C5C10 rings, respectively.

DHA DH HA D A DHA
C2H2Cg2i 0.93 2.94 3.670(4) 137
C4H4A Cg1ii 0.97 3.00 3.600(3) 122
C12H12A Cg2iii 0.97 2.82 3.689(4) 150

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

We are grateful for financial support from the National Natural Science Foundation of China (No. 81302644) and Jiangsu Ainaji Neo Energy Science & Technology Co. Ltd (No. 8507040091).

supplementary crystallographic information

S1. Comment

Pyrazole and its derivatives are an important class of N-heterocyclic compounds because they exhibit a broad spectrum of pharmacological activities such as antifungal (Adnan & Tarek, 2004), antitumor and antiangiogenic activities (Ashraf et al., 2003). As part of pyrazole derivatives, the crystal structure of 1, 4-bis[(1H-pyrazol-1-yl)methyl]benzene has been determined (Dong et al., 2011). As part of this ongoing search for new pyrazole compounds, the title compound was synthesized and its crystal structure is reported herein. In the title compound (Fig. 1), bond lengths and angles fall in normal ranges. The dihedral angle between the pyrazole ring (N1/N2/C1—C3) and the phenyl ring (C5—C10) is 76.06 (11) °. In the crystal, there exists weak C–H···π contacts.

S2. Experimental

In a 250 ml four-necked round-bottom flask equipped with a mechanical stirrer, pyrazole (0.680 g 10 mmol), potassium carbonate (2.073 g 15 mmol) and 1-(4-(bromomethyl)phenyl)-1-hydroxypentan-2-one (2.712 g, 10 mmol) were cautiously dissolved in acetone (100 ml). The solution was heated at 65 °C for 6 h, then the mixture was filtered off was removed by rotatory evaporator at 35 °C and the crude product was obtained 1.815 g (66.1%). Colourless blocks of the title compound were obtained from ethanol by slow evaporation.

S3. Refinement

H-atoms were placed in calculated positions and refined constrained to ride on their parent atoms, with C—H = 0.93–0.97 Å, Uiso(H) = 1.5Ueq(C) for methyl and 1.2Ueq(C) for the methylene.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level.

Fig. 2.

Fig. 2.

View of the packing diagram of the title compound along the b axis.

Crystal data

C13H14N2O2 Z = 2
Mr = 230.26 F(000) = 244
Triclinic, P1 Dx = 1.222 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 8.1338 (12) Å Cell parameters from 1485 reflections
b = 8.1961 (9) Å θ = 4.3–28.2°
c = 10.7933 (11) Å µ = 0.08 mm1
α = 74.013 (9)° T = 293 K
β = 83.308 (10)° Block, colourless
γ = 64.734 (13)° 0.22 × 0.20 × 0.18 mm
V = 625.54 (13) Å3

Data collection

Agilent SuperNova (Single source at offset, Eos) diffractometer 2197 independent reflections
Radiation source: fine-focus sealed tube 1639 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.032
phi and ω scans θmax = 25.0°, θmin = 3.0°
Absorption correction: multi-scan (CrysAlis RED; Agilent, 2012) h = −9→9
Tmin = 0.982, Tmax = 0.985 k = −9→9
4295 measured reflections l = −12→8

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.067 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.201 H-atom parameters constrained
S = 1.15 w = 1/[σ2(Fo2) + (0.079P)2 + 0.2197P] where P = (Fo2 + 2Fc2)/3
2197 reflections (Δ/σ)max < 0.001
155 parameters Δρmax = 0.18 e Å3
0 restraints Δρmin = −0.23 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 −0.3321 (5) 0.2354 (4) 0.0922 (3) 0.0772 (9)
H1 −0.4412 0.3219 0.0516 0.093*
C2 −0.3185 (4) 0.0903 (5) 0.1964 (3) 0.0787 (9)
H2 −0.4119 0.0606 0.2394 0.094*
C3 −0.1386 (4) −0.0001 (4) 0.2228 (3) 0.0718 (9)
H3 −0.0841 −0.1068 0.2885 0.086*
C4 0.1384 (4) 0.0519 (4) 0.1369 (3) 0.0653 (8)
H4A 0.1766 0.0861 0.0486 0.078*
H4B 0.2091 −0.0805 0.1712 0.078*
C5 0.1753 (3) 0.1603 (4) 0.2163 (2) 0.0543 (7)
C6 0.2157 (4) 0.0834 (4) 0.3464 (3) 0.0610 (7)
H6 0.2269 −0.0374 0.3842 0.073*
C7 0.2396 (4) 0.1856 (4) 0.4205 (2) 0.0584 (7)
H7 0.2671 0.1326 0.5077 0.070*
C8 0.2227 (3) 0.3657 (3) 0.3656 (2) 0.0505 (6)
C9 0.1870 (4) 0.4413 (4) 0.2343 (3) 0.0573 (7)
H9 0.1784 0.5611 0.1959 0.069*
C10 0.1643 (4) 0.3379 (4) 0.1609 (3) 0.0588 (7)
H10 0.1413 0.3888 0.0731 0.071*
C11 0.2393 (4) 0.4838 (4) 0.4420 (3) 0.0561 (7)
C12 0.2906 (4) 0.5017 (5) 0.6500 (3) 0.0726 (9)
H12A 0.1747 0.6050 0.6552 0.087*
H12B 0.3805 0.5512 0.6164 0.087*
C13 0.3460 (6) 0.3720 (6) 0.7790 (4) 0.1028 (13)
H13A 0.2574 0.3219 0.8103 0.154*
H13B 0.3544 0.4378 0.8374 0.154*
H13C 0.4622 0.2722 0.7729 0.154*
N1 −0.0526 (3) 0.0895 (3) 0.13866 (19) 0.0554 (6)
N2 −0.1716 (4) 0.2383 (3) 0.0558 (2) 0.0741 (8)
O1 0.2758 (3) 0.3958 (3) 0.56635 (18) 0.0672 (6)
O2 0.2213 (3) 0.6418 (3) 0.3986 (2) 0.0823 (7)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.075 (2) 0.072 (2) 0.083 (2) −0.0205 (17) −0.0233 (17) −0.0225 (17)
C2 0.070 (2) 0.088 (2) 0.079 (2) −0.0365 (18) 0.0043 (16) −0.0178 (18)
C3 0.078 (2) 0.075 (2) 0.0547 (17) −0.0352 (17) −0.0020 (14) 0.0029 (15)
C4 0.0684 (18) 0.083 (2) 0.0557 (17) −0.0358 (16) 0.0119 (13) −0.0318 (15)
C5 0.0541 (15) 0.0664 (17) 0.0469 (15) −0.0276 (13) 0.0101 (11) −0.0209 (12)
C6 0.0804 (19) 0.0549 (16) 0.0506 (16) −0.0330 (14) 0.0032 (13) −0.0109 (12)
C7 0.0788 (19) 0.0601 (16) 0.0391 (14) −0.0336 (14) 0.0003 (12) −0.0086 (12)
C8 0.0534 (14) 0.0530 (14) 0.0456 (14) −0.0235 (12) 0.0016 (11) −0.0114 (11)
C9 0.0660 (17) 0.0557 (15) 0.0489 (15) −0.0289 (13) −0.0030 (12) −0.0035 (12)
C10 0.0630 (17) 0.0721 (18) 0.0404 (14) −0.0305 (14) 0.0011 (11) −0.0090 (13)
C11 0.0593 (16) 0.0558 (16) 0.0552 (16) −0.0262 (13) −0.0016 (12) −0.0124 (13)
C12 0.079 (2) 0.082 (2) 0.072 (2) −0.0358 (17) −0.0023 (15) −0.0388 (17)
C13 0.131 (3) 0.105 (3) 0.070 (2) −0.031 (2) −0.027 (2) −0.039 (2)
N1 0.0692 (14) 0.0607 (13) 0.0401 (12) −0.0296 (11) −0.0015 (10) −0.0136 (10)
N2 0.100 (2) 0.0673 (16) 0.0533 (14) −0.0374 (14) −0.0200 (13) −0.0007 (12)
O1 0.0917 (15) 0.0665 (12) 0.0502 (12) −0.0353 (11) −0.0060 (10) −0.0181 (9)
O2 0.1173 (19) 0.0621 (13) 0.0756 (15) −0.0452 (13) −0.0147 (13) −0.0102 (11)

Geometric parameters (Å, º)

C1—N2 1.327 (4) C7—H7 0.9300
C1—C2 1.367 (5) C8—C9 1.391 (3)
C1—H1 0.9300 C8—C11 1.487 (4)
C2—C3 1.351 (4) C9—C10 1.385 (4)
C2—H2 0.9300 C9—H9 0.9300
C3—N1 1.333 (4) C10—H10 0.9300
C3—H3 0.9300 C11—O2 1.200 (3)
C4—N1 1.448 (3) C11—O1 1.336 (3)
C4—C5 1.524 (4) C12—O1 1.460 (3)
C4—H4A 0.9700 C12—C13 1.481 (5)
C4—H4B 0.9700 C12—H12A 0.9700
C5—C10 1.381 (4) C12—H12B 0.9700
C5—C6 1.385 (4) C13—H13A 0.9600
C6—C7 1.386 (4) C13—H13B 0.9600
C6—H6 0.9300 C13—H13C 0.9600
C7—C8 1.384 (4) N1—N2 1.348 (3)
N2—C1—C2 112.2 (3) C10—C9—C8 119.9 (2)
N2—C1—H1 123.9 C10—C9—H9 120.1
C2—C1—H1 123.9 C8—C9—H9 120.1
C3—C2—C1 104.4 (3) C5—C10—C9 120.9 (2)
C3—C2—H2 127.8 C5—C10—H10 119.5
C1—C2—H2 127.8 C9—C10—H10 119.5
N1—C3—C2 108.4 (3) O2—C11—O1 122.7 (3)
N1—C3—H3 125.8 O2—C11—C8 124.4 (3)
C2—C3—H3 125.8 O1—C11—C8 112.9 (2)
N1—C4—C5 111.3 (2) O1—C12—C13 107.1 (3)
N1—C4—H4A 109.4 O1—C12—H12A 110.3
C5—C4—H4A 109.4 C13—C12—H12A 110.3
N1—C4—H4B 109.4 O1—C12—H12B 110.3
C5—C4—H4B 109.4 C13—C12—H12B 110.3
H4A—C4—H4B 108.0 H12A—C12—H12B 108.5
C10—C5—C6 119.0 (2) C12—C13—H13A 109.5
C10—C5—C4 120.7 (2) C12—C13—H13B 109.5
C6—C5—C4 120.3 (2) H13A—C13—H13B 109.5
C5—C6—C7 120.4 (2) C12—C13—H13C 109.5
C5—C6—H6 119.8 H13A—C13—H13C 109.5
C7—C6—H6 119.8 H13B—C13—H13C 109.5
C8—C7—C6 120.4 (2) C3—N1—N2 110.7 (3)
C8—C7—H7 119.8 C3—N1—C4 127.7 (2)
C6—C7—H7 119.8 N2—N1—C4 121.4 (2)
C7—C8—C9 119.2 (2) C1—N2—N1 104.3 (2)
C7—C8—C11 122.5 (2) C11—O1—C12 117.0 (2)
C9—C8—C11 118.3 (2)
N2—C1—C2—C3 −0.8 (4) C7—C8—C11—O2 −178.2 (3)
C1—C2—C3—N1 0.6 (4) C9—C8—C11—O2 1.1 (4)
N1—C4—C5—C10 −88.7 (3) C7—C8—C11—O1 1.5 (4)
N1—C4—C5—C6 89.5 (3) C9—C8—C11—O1 −179.2 (2)
C10—C5—C6—C7 1.8 (4) C2—C3—N1—N2 −0.3 (4)
C4—C5—C6—C7 −176.5 (2) C2—C3—N1—C4 174.4 (3)
C5—C6—C7—C8 0.2 (4) C5—C4—N1—C3 −89.3 (4)
C6—C7—C8—C9 −2.0 (4) C5—C4—N1—N2 84.9 (3)
C6—C7—C8—C11 177.3 (2) C2—C1—N2—N1 0.6 (4)
C7—C8—C9—C10 1.6 (4) C3—N1—N2—C1 −0.2 (3)
C11—C8—C9—C10 −177.7 (2) C4—N1—N2—C1 −175.3 (2)
C6—C5—C10—C9 −2.1 (4) O2—C11—O1—C12 1.0 (4)
C4—C5—C10—C9 176.1 (2) C8—C11—O1—C12 −178.7 (2)
C8—C9—C10—C5 0.4 (4) C13—C12—O1—C11 −175.4 (3)

Hydrogen-bond geometry (Å, º)

Cg1 and Cg2 are the centroids of the N1/N2/C1–C3 and C5–C10 rings, respectively.

D—H···A D—H H···A D···A D—H···A
C2—H2···Cg2i 0.93 2.94 3.670 (4) 137
C4—H4A···Cg1ii 0.97 3.00 3.600 (3) 122
C12—H12A···Cg2iii 0.97 2.82 3.689 (4) 150

Symmetry codes: (i) x−1, y, z; (ii) −x, −y, −z; (iii) −x, −y+1, −z+1.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: HB7319).

References

  1. Adnan, A. B. & Tarek, A. Z. (2004). Bioorg. Med. Chem. 12, 1935–1945.
  2. Agilent (2012). CrysAlisRED. Agilent Technologies Ltd, Yarnton, England.
  3. Ashraf, H. A., Amal, A. H. E. & Ghaneya, S. H. (2003). Chem. Pharm. Bull. 51, 838–844.
  4. Bruker (2004). FRAMBO and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
  5. Dong, G.-Y., Liu, T.-F., Jiao, C.-H., Deng, X.-C. & Shi, X.-G. (2011). Acta Cryst. E67, o1685. [DOI] [PMC free article] [PubMed]
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536814025100/hb7319sup1.cif

e-70-o1287-sup1.cif (16.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814025100/hb7319Isup2.hkl

e-70-o1287-Isup2.hkl (108KB, hkl)

Supporting information file. DOI: 10.1107/S1600536814025100/hb7319Isup3.cml

. DOI: 10.1107/S1600536814025100/hb7319fig1.tif

The mol­ecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level.

b . DOI: 10.1107/S1600536814025100/hb7319fig2.tif

View of the packing diagram of the title compound along the b axis.

CCDC reference: 1034364

Additional supporting information: crystallographic information; 3D view; checkCIF report


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