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The Journal of Neuroscience logoLink to The Journal of Neuroscience
. 2015 Jan 14;35(2):864–866. doi: 10.1523/JNEUROSCI.4506-14.2015

Correction: Zhang et al., An RNA-Sequencing Transcriptome and Splicing Database of Glia, Neurons, and Vascular Cells of the Cerebral Cortex

PMCID: PMC4293428

In the article “An RNA-Sequencing Transcriptome and Splicing Database of Glia, Neurons, and Vascular Cells of the Cerebral Cortex” by Ye Zhang, Kenian Chen, Steven A. Sloan, Mariko L. Bennett, Anja R. Scholze, Sean O'Keeffe, Hemali P. Phatnani, Paolo Guarnieri, Christine Caneda, Nadine Ruderisch, Shuyun Deng, Shane A. Liddelow, Chaolin Zhang, Richard Daneman, Tom Maniatis, Ben A. Barres, and Jian Qian Wu, which appeared on pages 11929–11947 of the September 3, 2014 issue, an oversight led to the omission of recognizing two authors, Dr. Kenian Chen and Dr. Jian Qian Wu, who contributed toward the writing of the paper. The Author Contribution footnote should have read “Author contributions: Y.Z., S.A.S., M.L.B., R.D., T.M., B.A.B., and J.Q.W. designed research; Y.Z., S.A.S., M.L.B., A.R.S., C.C., N.R., and S.D. performed research; S.A.L. and C.Z. contributed unpublished reagents/analytic tools; Y.Z., K.C., S.A.S., M.L.B., S.O., H.P.P., and P.G. analyzed data; Y.Z., K.C., S.A.S., B.A.B., and J.Q.W. wrote the paper. Also, note that a few typos have been noted in some gene names in Tables 2 and 3, and in Figure 4. The author contributions, Tables 2 and 3 and Figure 4 have been corrected on the online PDF version. The corrected tables and figure are shown below.

Table 2.

Cell type-enriched ligands and receptors

Astrocyte Neuron OPC NFO MO Microglia Endothelial Pericyte
Enriched transmembrane receptors Ptprz1 Gpc1 Pdgfra Gpr17 Efnb3 Csf1r Tfrc Pdgfrb
Ednrb Ptprn Gpr17 Sema4d Gpr37 Cd83 Pglyrp1 Colec12
S1pr1 Caly Itgav Plxnb3 Sema4d Tyrobp H2-D1 Sfrp1
Fgfr3 Grin1 Omg Ddr1 Lpar1 Ccrl2 Eltd1 S1pr3
Gabbr1 Ptprn2 Gfra1 Efnb3 Ddr1 B2m Kdr Abcc9
Tnfrsf19 Gria1 Gria3 Gpr37 Omg Trem2 Eng Rarres2
Vcam1 Cnr1 Sstr1 Lpar1 Ephb1 Sirpa Tie1 Pdgfrl
Adcyap1r1 Opcml Il1rap Pdgfra Gprc5b Fcer1g Cav1 Mrc2
Gria2 Stx1b Adora1 Omg S1pr5 Cd14 Flt1 Fas
F3 Cxadr Lypd1 Ephb1 Gpr17 Icam1 Fcgrt Ednra
Grm3 Nptxr Gria4 Sema5a Plxnb3 Cx3cr1 Sema7a Lepr
Dag1 Grm2 Chrna4 Il1rap Gpr62 Lag3 Lsr Osmr
Plxnb1 Robo2 Sema5a S1pr5 Il1rap Gpr56 Acvrl1 Gprc5a
Ntsr2 Kit Calcrl Prkcz Prkcz Itgam Tek Ifitm1
Fgfr1 Gabrb3 Gabra3 Erbb3 Itgb4 Fcgr3 Gpr116 Ddr2
Ptch1 Gabrg2 Grin3a Gpr62 Erbb3 P2ry12 Fzd6 Scarf2
Fgfr2 Sarm1 Oprl1 Ptpre Sema5a P2ry13 Ptprb Tgfbr3
Gpr19 Gabra2 Grik4 Grik3 Tnfrsf12a Aplnr Fzd5
Itga6 Darc Plxnb3 Grik2 H2-K1 Ptprg Npy1r
Gabbr2 Celsr3 Grik3 Casr Gpr183 Plxnd1 Celsr1
Enriched ligands Sparcl1 Reln Matn4 Gsn Trf Cst3 Sparc Igf2
Cpe Sst Scrg1 Lgi3 Gsn C1qa Sepp1 Vtn
Cyr61 Npy Olfm2 Scrg1 Apod Ccl4 Pltp Cxcl12
Mfge8 Olfm1 Vcan Enpp6 Lgi3 Ccl3 Igfbp7 Col4a1
Clu Dkk3 Emid1 Matn4 Metrn C1qb Spock2 Col1a2
Htra1 Ccl27a Tnr Tnr Endod1 C1qc Ctla2a Bgn
Igfbp2 Cx3cl1 Nxph1 Ddr1 Adamts4 Selpig Pglyrp1 Dcn
Vegfa Cck Timp4 Adamts4 Cntn2 Ctsb Col4a1 Ptgds
Scg3 Vgf Spon1 Metrn Enpp6 B2m Egfl7 Cxcl1
Ncan Vstm2l Igsf21 Fam3c Hapln2 Gdf15 AU021092 Col1a1
Pla2g7 Chgb Gsn C1ql1 Il1rap Olfm3 Srgn Fstl1
Fjx1 Scg2 Fam5c Vcan Erbb3 Tnf Fn1 Col3a1
Timp3 C1qtnf4 Qpct Timp4 Slpi Pla2g15 Kdr Mdk
Il18 Cxadr C1ql3 Il1rap Klk6 Tcn2 Apln Igfbp5
Btbd17 Col6a2 Smoc1 Col11a2 Col11a2 Ly86 Wfdc1 Serpinf1
Itih3 Resp18 Gpc5 Bmp4 Matn4 Plod1 Angptl4 Nbl1
Hapln1 Vstm2a Il1rap Elfn2 Dlk2 Il1a Htra3 Nid2
Lcat Car11 Dscam Dlx2 Il23a Tgfb1 Smpdl3a Islr
Chrdl1 Igfbpl1 Chga Spon1 Wnt3 Lgals9 Lama4 Ptx3
Pla2g3 Nppc Nptx2 Dscam Npb Ccl2 Emcn Vasn

Table 3.

Cell type-specific splicing events

Gene Coverage dI p value FDR
Astrocyte Fyn 771 −0.27 1.15 E-176 1.95 E-174
Prom1 251 0.86 1.12 E-133 4.59 E-131
Ncam1 3576 0.24 1.63 E-132 5.93 E-130
Ptprf 480 −0.58 1.03 E-120 2.98 E-118
Srgap3 308 0.69 1.99 E-84 1.44 E-82
Kif1a 180 0.75 3.12 E-66 1.76 E-64
Ptk2 134 −0.47 1.33 E-63 6.73 E-62
Camk2g 903 −0.44 5.75 E-56 2.43 E-54
Mapk8 270 −0.55 6.98 E-37 2.36 E-35
Pkm2 1112 −0.23 2.85 E-25 6.58 E-24
Neurons Agrn 907 −0.5 <1 E-300 <1 E-300
App 5181 0.2 <1 E-300 <1 E-300
Atp6v0a1 1815 −0.66 <1 E-300 <1 E-300
Clta 3032 −0.81 <1 E-300 <1 E-300
Dync1i2 1618 −0.82 <1 E-300 <1 E-300
Nfasc 821 −0.94 <1 E-300 <1 E-300
Rab6 3058 0.34 <1 E-300 <1 E-300
Mtss1 1244 −0.6 5.19 E-216 7.02 E-214
Srgap3 834 0.62 1.69 E-132 1.52 E-130
Lrp8 328 −0.75 3.23 E-119 2.51 E-117
Oligodendrocytes Phldb1 2947 −0.58 <1 E-300 <1 E-300
Aplp2 1358 0.48 <1 E-300 <1 E-300
Capzb 1350 −0.58 5.97 E-263 3.54 E-260
Add1 1515 −0.51 1.41 E-231 5.95 E-229
Mpzl1 1165 0.45 4.37 E-227 3.15 E-223
Cldnd1 1187 −0.6 2.49 E-209 8.2 E-207
Enpp2 1550 0.23 1.63 E-209 2.35 E-191
H2afy 320 0.43 1.31 E-35 5.11 E-34
Mtss1 181 0.44 1.58 E-24 4.54 E-23
Snap25 100 0.39 8.8 E-22 2.1 E-20
Microglia Clstn1 588 0.91 <1 E-300 <1 E-300
H13 1263 0.2 6.2 E-296 3.94 E-283
Sema4d 768 0.6 1.19 E-282 6.79 E-280
App 705 −0.6 5.33 E-240 2.04 E-237
Add1 509 0.57 9.97 E-188 3.17 E-185
Lass5 408 0.65 2.49 E-174 7.12 E-172
Rapgef1 355 0.45 2.22 E-173 5.79 E-171
Fmnl1 493 0.44 1.32 E-158 3.15 E-156
Fez2 853 0.36 1.61 E-139 3.08 E-137
Fyn 131 0.68 7.07 E-89 9.31 E-87
Endothelial Adam15 893 0.7 <1 E-300 <1 E-300
Mcf2l 629 0.74 <1 E-300 <1 E-300
Palm 942 −0.65 <1 E-300 <1 E-300
Ablim1 1025 0.47 <1 E-300 <1 E-300
Mprip 3292 −0.51 <1 E-300 <1 E-300
Actn4 1805 −0.31 <1 E-300 <1 E-300
Ktn1 809 −0.7 3.84 E-226 1.02 E-223
Arhgef1 865 0.36 2.23 E-219 5.66 E-217
Eif4h 1199 0.46 1.14 E-197 2.29 E-195
Pkp4 577 0.63 1.68 E-195 3.26 E-193

Figure 4.

Figure 4.


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