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Published in final edited form as: East Afr Med J. 2014 May;91(5):145–151.

MORTALITY AFTER CLINICAL MANAGEMENT OF AIDS-ASSOCIATED CRYPTOCOCCAL MENINGITIS IN KENYA

Randall Baldassarre a, Rennatus Mdodo b, Enoch Omonge c, Walter Jaoko c, John Baddley d, Peter Pappas d, Kempf Mirjam-Colette b, Inmaculada Aban b, Susan Odera c, Andrew Suleh e, Pauline E Jolly a,*
PMCID: PMC4324694  NIHMSID: NIHMS418844  PMID: 25684784

Abstract

Objectives

To assess the clinical management and mortality associated with cryptococcal meningitis (CM) in acquired immunodeficiency syndrome (AIDS) patients in Kenya.

Introduction

Cryptococcal meningitis (CM) is an increasingly prevalent infection among AIDS patients and is becoming a leading cause of morbidity and mortality in Africa. The short-term prognosis and management of patients with CM may be improved by identifying factors leading to mortality in CM patients.

Design

A retrospective chart review of 76 HIV-infected CM patients admitted between August 2008 and March 2009 at Kenyatta National Hospital and Mbagathi District Hospital.

Subjects

Seventy six confirmed CM positive patients.

Results

Results show that 30 (40%) of 76 patients diagnosed with CM died during hospitalization after a median hospital stay of 10 days (range, 2–73 days). Significant predictors of mortality in the univariate model were Mycobacterium tuberculosis (TB) co-infection (P = 0.04), having been diagnosed with a co-morbid condition such as diabetes, oral candidiasis and hypertension (P = 0.01), and a low median CD4+ T lymphocyte count (P < 0.001). The multivariable model revealed that male sex, previous or current ART at admission and CD4+ T lymphocyte count less than 50 were significant predictors of mortality. Conversely, a minimum of two weeks of amphotericin B treatment (P < 0.001), initiation of antiretroviral therapy (ART) (P = 0.007) and monitoring of creatinine and electrolyte levels (P = 0.02) were significantly associated with survival in the univariate model.

Conclusions

These results demonstrate the CM-associated mortality in Kenya is high and that there is an opportunity to improve the management and the short-term outcomes of hospitalized HIV positive patients with CM.

Keywords: Cryptococcal meningitis, management, outcomes, Kenya

INTRODUCTION

Immunosuppressed individuals are particularly susceptible to Cryptococcus neoformans infection and development of cryptococcal meningitis (CM).1 Thus, in regions of the world that are heavily burdened by the acquired immunodeficiency syndrome (AIDS) epidemic, the incidence rate of AIDS-associated CM is remarkably high.2 An estimated 720,000 individuals are infected with CM each year in sub-Saharan Africa.2 The short-term prognosis of patients with CM is poor, and the disease is becoming a leading cause of morbidity and mortality among AIDS patients.3, 4 Even with the most effective treatment, mortality typically occurs at a proportion of 9–70% within 3 months of diagnosis, and in-hospital mortality in sub-Saharan Africa occurs at a rate of 25%.2, 5

We focused our study on assessing the management of CM patients in Kenya, where 1.4 million people are living with human immunodeficiency virus (HIV) infection. The national prevalence of HIV is estimated at 7.8% for adults aged 15–49 years and the CM-associated mortality is high.2,6,7 Current guidelines for sub-Saharan Africa recommend 1 mg/kg/d amphotericin B (AmB) for 2 weeks as induction therapy or, if unavailable, fluconazole (FLC) 800 mg for 4 weeks.8 This is followed by fluconazole (FLC) 400 mg/d alone for 8 weeks and 200 mg/d thereafter for life. Since antifungal medication is limited in these regions, other predictors of mortality must be identified to ease the burden of CM.

Most African studies that evaluated antifungal therapy for CM were carried out in South Africa or Uganda.9 Considering that treatment for CM is similar throughout sub-Saharan Africa, we expected the clinical outcomes in Kenya to be comparable to those found in previous studies. We conducted this study to elucidate factors associated with mortality in CM in HIV patients at two public hospitals in Nairobi, Kenya. Given the limited resources in developing areas, the identification of modifiable factors associated with mortality will be helpful in improving in-hospital CM management.

MATERIALS AND METHODS

Study design

A retrospective review of 76 patient medical records of patients admitted to Kenyatta National Hospital (KNH) or Mbagathi District Hospital (MDH) between August 2008 and March 2009 was conducted. Patients considered for this study had to be HIV and CM positive, whereas CM diagnosis had to be confirmed via India ink staining and/or cryptococcal antigen testing.

Study settings and participants

KNH is the oldest and largest referral and teaching hospital in Kenya with a 1,800 bed capacity. It serves as the primary hospital for the 4 million residents in the capital city, Nairobi. MDH is a 169-bed public hospital that serves as the tuberculosis referral centre for Nairobi. Study participants included HIV+ patients 13 years and older admitted at the two hospitals with a diagnosis of CM. All participants included in the study gave informed consent to have their records reviewed. Ethical approval and permission for this study was obtained from the UAB Institutional Review Board (IRB) and the Kenyatta National Hospital Ethics and Research Committee.

Patient data collection

A data abstraction sheet was used to collect data from each patient’s medical records. Variables abstracted included demographic characteristics, duration of illness, previous use of antifungal drugs, CM treatment, general questions on CM management (e.g. rehydration with potassium chloride, therapeutic lumbar puncture [LP], fundoscopy, computed tomography [CT] scan, creatinine measurements and monitoring, hemoglobin and glucose measurements and use of analgesics) and clinical status of HIV infection. Date of HIV diagnosis, CD4 counts, HIV viral load, co-morbidities (neurological disorders, chronic conditions and microbial infections), discharge status (alive or dead) and treatments were also obtained from patient records.

Statistical analysis

Categorical variables are presented as frequencies and percentages, and continuous variables as means and medians. Clinical presentation and outcome were compared using χ2 test and Fisher’s exact test for categorical variables, and student t test and z test for continuous variables. Correlation analyses were performed to detect multicollinearity between independent variables. Multivariable logistic regression analyses using a significance level of <0.05 was used to determine factors associated with CM outcomes. Variables that were statistically significant at p<0.05 on the bivariate model and those known to be associated with clinical outcomes of CM based on previous studies were entered into the multivariable model using the backward stepwise method. Odds ratios (OR) and 95% confidence intervals (CI) were generated as measures of association for all variables entered into the model. Data analysis was conducted using SAS, version 9.1 (SAS Institute Inc., Cary, North Carolina, USA).

RESULTS

Patient characteristics

Characteristics of the patient cohort are summarized in Table 1. Of the 76 patients diagnosed with CM, 36 (47%) were seen at KNH and 40 (53%) at MDH. All patients were confirmed to be HIV positive. Median age of the patients was 35 and 61% were males. TB co-infection was reported in approximately one-third (33%) of the patients. At the time of admission for CM, 26 patients (36%) were known to be infected with HIV, and 19 (25%) were currently or previously on ART. The median CD4+ T lymphocyte count of the CM patients was 31 cells/mm3. In addition to CM, other AIDS-defining illnesses diagnosed in the cohort included tuberculosis (33%), Kaposi’s sarcoma (1 patient), and candidiasis (1 patient).

Table 1.

Baseline charactristics of patients with cryptococcal meningitis admitted at Kenyatta National Hospital and Mbagathi District Hospital between August 2008 and March 2009.

Variable Frequency n = 76 (%)
Age, median years (range) 35 (20–53)
Sex
 Females 30 (40)
 Males 46 (60)
Time to discharge: median days (range) 22 (5–68)
Time to death: median days (range) 10 (3–74)
TB co-infection 25 (33)
HIV-seropositive at admission 26 (36)
ART, current or previous 19 (25)
CD4+ T lymphocyte count in cells/mm3
 Not measured 22 (29)
 ≤25 19 (25)
 25–99 24 (31)
 100–249 9 (12)
 ≥250 2 (3)
 Median (range) 31 (1–468)
Viral load, median HIV-1 RNA copies/μl (range) 605,000 (207–6,000,000)
CSF protein/glucose levels
 Not measured 39 (51)
 High CSF protein levels 24 (32)
 Low CSF glucose levels 33 (42)
Complete blood count
 Not done 29 (38)
 Low hemoglobin levels 15 (20)
 Low white blood cells count 13 (17)
Baseline creatinine and electrolytes
 Not measured 41 (54)
 Measured 35 (46)
 Measured more than once 25 (33)
 Creatinine, median μmol/L (range) 91 (42–153)
Antifungal therapy
 None 5 (7)
 AmB and FLC 39 (51)
 AmB alone 23 (30)
 FLC alone 9 (12)
ART initiated 8 (11)
Analgesics
 None 16 (21)
 Paracetamol 40 (53)
 Tramadol 13 (17)
 Brufen 14 (18)
 Diclofenac 13 (17)
Antibiotics
 None 4 (5)
 Co-trimoxazole 54 (72)
 Benzylpenicillin 48 (63)
 Ceftriaxone 32 (42)
 Chloramphenicol 32 (42)

Treatment profiles

As indicated in Table 1, 54% of the CM patients who received and completed the WHO recommended AmB and FLC combination therapy. More than 90% of the CM patients received some form of antifungal therapy and antibiotics for treatment of CM and bacterial infections other than TB respectively. Most patients received co-trimoxazole and/or benzylpenicillin to treat and prevent bacterial infections. The majority (79%) of the patients also received at least one analgesic, the most common of which was paracetamol (53%).

In-hospital Mortality Profile

A comparison of the short-term outcome of inpatients is given in Table 2. Overall, 39% (30/76) of the patients confirmed to have CM died, with a median time to death of 10 days after admission. The two-week mortality was 29% (22/76). Univariate analysis revealed that mortality was associated with concomitant TB infection (P=0.04), having a co-morbid condition such as diabetes, oral candidiasis and hypertension (p=0.01), and measuring baseline creatinine and electrolyte once (P<0.001). Patients who died had significantly lower CD4+ T lymphocyte counts compared with those who survived (P<0.001). All but 2 patients discharged alive at KNH had their creatinine and electrolyte levels measured more than once. Of the 10 patients who had creatinine and electrolyte levels measured only once, the 6 who received AmB all died (data not shown). The 8 patients who were started on ART in-hospital were more likely to be discharged alive than those who were not (P=0.007). A multivariate analysis showed that male sex (OR= 1.9, CI 1.0–3.7, P=0.06), previous or current ART at the time of admission (OR= 3.5, CI 1.2–10.6, P=0.03), and CD4+ T lymphocyte count <50 (OR= 4.3, CI 1.5–12.6, P=0.01) were independently associated with mortality.

Table 2.

In-hospital mortality profile of HIV positive patients with CM in Kenya between August 2008 and March 2009.

Variable Alive n = 46 (%) Dead n = 30 (%) P value
Hospital
 Kenyatta National Hospital 16 (40) 14 (39) 0.58
 Mbagathi District Hospital 24 (60) 16 (61)
Outcome after two weeks of admission 54 (71) 22 (29) 0.07
Age, median years (range) 35.0 (20–46) 35.5 (25–53) 1.00
Sex
 Females 18 (39) 12 (40) 1.00
 Males 28 (61) 18 (60)
Antifungal therapy
 None 1 (2) 4 (13) 0.08
 AmB and FLC 27 (59) 12 (40) 0.26
 AmB alone 13 (28) 10 (34) 0.80
 FLC alone 5 (11) 4 (13) 0.73
ART
 Current or previous 14 (30) 5 (17) 0.28
 Initiated 8 (17) 0 (0) 0.007
TB co-infection 10 (22) 15 (50) 0.04
Co-morbidity present 15 (33) 22 (73) 0.01
Viral load, median HIV-1 RNA copies/μl (range) 604,924 (207–6,000,000) 604,746 (93,053–3,536,282) 0.87
CD4+ T lymphocyte count, median cells/mm3 (range) 49 (1–468) 14 (3–214) <0.001
Antibiotics administered
 Any 44 (96) 27 (90) 0.30
 None 1 (2) 3 (10) 0.32
 Co-trimoxazole 36 (78) 18 (60) 0.35
 Benzylpenicillin 32 (70) 16 (53) 0.38
 Ceftriaxone 21 (46) 11 (37) 0.55
 Chloramphenicol 18 (39) 14 (47) 0.62
 Metronidazole 2 (4) 3 (10) 0.38
Baseline creatinine and electrolytes
 Not measured 25 (54) 16 (53) 0.95
 Measured 21 (46) 14 (47) 0.84
 At least six times 8 (17) 0 (0) 0.02
 At least four times 18 (39) 2 (7) 0.002
 At least twice 20 (43) 5 (17) 0.02
 Once 1 (2) 9 (30) <0.001

Values in bold are statistically significant at p<0.05

Chi square and student t-test were used for categorical and continuous variables, respectively.

Co-morbidity include; TB, hepatitis B, brain abscess, Kaposi’s sarcoma, gastroenteritis, hypertension, diabetes, cerebral atrophy, subarachnoid hemorrhage, epilepsy, ulcer, psychosis, pellagra, respiratory tract infection, and oral candidiasis.

DISCUSSION

This study reveals the high mortality associated with CM in HIV patients at public hospitals in Kenya and discusses some aspects of CM management that can be improved. We have identified predictors of mortality among CM patients and highlighted the need to address the existing gaps in the management of this disease in Kenya.

CM associated mortality in our inpatient population, both at two weeks (29%) and overall (39.5%) is consistent with previously published studies from Africa.10,11 We found that the majority of the deceased patients (73%) died during the first two weeks of admission. This may be attributed to late presentation of patients as evidenced by low CD4 counts and high viral loads at admission. Our study also revealed that patients who had previously or currently receiving ART at the time of admission were four times more likely to die. This may be attributed to advanced AIDS stage at presentation to hospital. A recent cost-effectiveness study supported routine cryptococcal antigen (CRAG) screening for patients who are beginning ART since the clinical symptoms of CM manifest three weeks after detection is possible.12 In limited resource settings, early screening and appropriate FLC prophylaxis could potentially ease the burden of CM in AIDS patients.

Although the patients who completed AmB treatment fared well, it should be noted that 20 patients who were started on AmB, either alone or in combination with FLC, died. From our univariate analysis, we suspect that the inadequate monitoring of creatinine and electrolyte levels may also have contributed to these deaths. Ideally, AmB should be stopped if significant nephrotoxicity develops.7, 9 All 6 patients who were not tested for renal function after AmB treatment was started died. Although this may be due to patients dying before they could be monitored properly, we found a protective effect from being tested even once after treatment. Specifically, of the 24 patients who were treated with AmB and had creatinine and electrolyte levels monitored at least once after treatment initiation, only 5 died. Although AmB is the most effective antifungal available for CM patients, our results show the benefit of treatment is blunted without proper assessment of renal function. Even in areas of limited resources, adequate monitoring should be feasible.

Since patients at MDH must wait for their families to procure AmB, which can be costly (USD 200), FLC is sometimes given as the first-line of treatment. This is unfortunate since AmB is known to clear cryptococcal infections more rapidly than FLC.13 While mortality was not significantly associated with any of the three combinations of antifungal therapy (AmB, FLC, AmB and FLC) in our study, the unavailability of AmB may be negatively impacting the health of CM patients. Even though AmB is given as soon as it becomes available, at which time FLC is stopped, this delay may be as long as one week. Serious consideration should be given to increasing the availability of AmB in public hospitals.14

Few CM studies have evaluated the impact of co-morbidity, which is often present in immunocompromised patients and likely contributes to mortality. We found that the survival for the patients co-infected with TB was only 40%, significantly lower in comparison with the proportion of patients without TB. Of note, rifampicin, a mainstay of anti-TB therapy, was previously shown to hasten the elimination of FLC from the body.15,16 The clinical impact of this interaction is still unknown. To our knowledge, no clinical trial has included CM and TB patients as a separate treatment group. Further studies should determine the prevalence of concomitant TB and compare the clinical presentation, treatment, and outcome of these patients to those solely infected with CM. As evident from our data, other antibiotics are widely used in the management of CM but the association of these drugs with clinical outcome is unknown.

We found that initiation of ART during the induction phase of antifungal treatment was associated with survival. Currently available data do not provide a consensus on when to initiate ART in patients who have received AmB treatment.17 With the increasing access to ART in sub-Saharan Africa and other developing areas, research efforts should focus on making recommendations for the timing of ART initiation in CM patients. In particular, there is a concern that CM relapse, which often occurs as a result of immune reconstitution inflammatory syndrome (IRIS) secondary to starting ART after AmB treatment, may lead to increased mortality.1, 18 Our study was unable to follow patients for development of cryptococcal IRIS, normally seen after 30 days of ART initiation.18

There are several limitations to this study. First, mortality or survival was our only endpoint. CSF culture status after two weeks of treatment would have been a useful measure of success of treatment, but the standard of care at these hospitals did not include regularly scheduled follow-up lumbar punctures. Although therapeutic lumbar punctures are known to have been carried out, patient records do not reflect such management of intracranial pressure. Also, we could not ascertain the cause of death of the patients, and therefore, other AIDS-related complications may have contributed to mortality, especially in individuals who died several weeks after CM diagnosis. Finally, the study data were exclusively collected from inpatient files and we could not investigate long-term survival or factors associated with relapse.

CONCLUSION

In our overview of the management of CM in Kenya, likely representative of the care delivered throughout sub-Saharan Africa, we found that the in-hospital mortality is excessively high. Although the poor prognosis may be partly explained by late stage of disease at presentation, we believe that mortality can be reduced by adjusting modifiable factors. For instance, all patients receiving AmB must be regularly monitored to detect possible nephrotoxicity, at which point treatment may be switched. Also, CRAG testing of patients receiving ART may lead to early, improved CM management. Long-term goals for CM management should be to determine optimal treatment regiments for patients with comorbidities such as TB. Improving the survival of these patients alone would largely improve outcomes among CM patients. Resistance of C. neoformans to FLC, which has been reported in Kenya and its effect on clinical outcomes, will require further studies to be evaluated.19 Lastly, there is a pressing need to improve access to the most effective antifungal drugs in Kenya. The problem of treatment availability in resource-limited settings cannot be overemphasized.

Acknowledgments

The authors would like to thank all the patients who participated in this study. We are grateful to the staff, interns and students of Kenyatta National Hospital, Mbagathi District Hospital, University of Nairobi Microbiology Department and Kenya AIDS Vaccine Initiative.

Financial support: This study was supported by the Minority Health International Research Training (MHIRT) grant no. T37-MD001448 from the National Center on Minority Health and Health Disparities, National Institutes of Health, Bethesda, MD, USA, and the Department of Medical Microbiology, University of Nairobi and Kenyatta National Hospital, Nairobi, Kenya

Footnotes

Competing interests: There are no conflicts of interests for all authors.

Authors’ contributions: This work was carried out in collaboration between all authors. RB, RM, PJ, PP, JB CA MK, EO and WJ defined the research theme and participated in designing the methods and data collection instruments. They also discussed data analyses, interpretation, and presentation. RB, AS and RM participated in data collection. RB, RM and CA analyzed the data. RB and RM wrote the paper with revisions by PJ, PP, JB, WJ and MK. All authors read and approved the manuscript.

Contributor Information

Randall Baldassarre, Email: rlbaldassarre@gmail.com.

Rennatus Mdodo, Email: rmdodo@uab.edu.

Enoch Omonge, Email: omongedr@yahoo.com.

Walter Jaoko, Email: wjaoko@KAVIUON.ORG.

John Baddley, Email: jbaddley@uab.edu.

Peter Pappas, Email: pappas@uab.edu.

Kempf Mirjam-Colette, Email: mkempf@uab.edu.

Inmaculada Aban, Email: caban@uab.edu.

Andrew Suleh, Email: sulehaj@yahoo.com.

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