Background: Protein glycation is a nonenzymatic covalent reaction between proteins and carbonyl groups resulting in protein denaturation.
Results: DJ-1 is the first protein deglycase that repairs proteins from glycation by glyoxals, which constitutes most glycation damage.
Conclusion: DJ-1 is a novel protein repair enzyme that protects proteins against glycation.
Significance: DJ-1 deglycase activity changes our view on glycation/deglycation and DJ-1-associated Parkinsonism.
Keywords: Glycation, Protein Aggregation, Protein Chemical Modification, Protein Conformation, Protein Denaturation, Carbonyl Stress, Dicarbonyl Compounds, Electrophile Stress
Abstract
Glycation is an inevitable nonenzymatic covalent reaction between proteins and endogenous reducing sugars or dicarbonyls (methylglyoxal, glyoxal) that results in protein inactivation. DJ-1 was reported to be a multifunctional oxidative stress response protein with poorly defined function. Here, we show that human DJ-1 is a protein deglycase that repairs methylglyoxal- and glyoxal-glycated amino acids and proteins by acting on early glycation intermediates and releases repaired proteins and lactate or glycolate, respectively. DJ-1 deglycates cysteines, arginines, and lysines (the three major glycated amino acids) of serum albumin, glyceraldehyde-3-phosphate dehydrogenase, aldolase, and aspartate aminotransferase and thus reactivates these proteins. DJ-1 prevented protein glycation in an Escherichia coli mutant deficient in the DJ-1 homolog YajL and restored cell viability in glucose-containing media. These results suggest that DJ-1-associated Parkinsonism results from excessive protein glycation and establishes DJ-1 as a major anti-glycation and anti-aging protein.
Introduction
The Parkinsonism-associated protein DJ-1/Park7 is described as a multifunctional oxidative stress response protein that belongs to the PfpI/Hsp31/DJ-1 superfamily, whose members possess a conserved exposed cysteine involved in environmental stress resistance (1–3). DJ-1 has been reported to function as a chaperone for synuclein (4, 5), a covalent chaperone for the thiol proteome (6, 7), a peroxidase (8), a protease (9), a glyoxalase (10), a stabilizer of Nrf2 (11), an apoptosis inhibitor via interaction with Daxx (12), and a translational regulator (13, 14).
We reported recently that DJ-1 formed mixed disulfides with sulfenylated proteins and released repaired proteins following the reduction of mixed disulfides by low molecular weight thiols (6, 7). The ability of DJ-1 to repair covalently modified proteins, the fact that its presumed chaperone, protease, and glyoxalase activities are weaker than those of major chaperones, proteases, and glyoxalases (3, 9, 10), the finding that enzymes involved in protein repair, such as thioredoxins and peptidyl prolyl isomerases, display chaperone properties (15–17), and the co-expression of the Bacillus subtilis DJ-1 homolog YraA with the aldoketoreductase AdhA, which is involved in carbonyl stress resistance (18), suggested to us that DJ-1 might be involved in glycated protein repair.
The nonenzymatic reaction between sugar carbonyl groups and amino acids was discovered by the French chemist Louis Camille Maillard in 1912 (19). This reaction also occurs in vivo (20) and involves the spontaneous reaction of endogenous and exogenous carbonyls with the thiol and amino groups of proteins, nucleic acids and amino lipids (21). The condensation reaction between carbonyls and amino acids begins with the rapid formation of a hemithioacetal with cysteines and formation of aminocarbinols with arginines and lysines (21, 22), after which a series of dehydrations, oxidations, and rearrangements leads to a myriad of products, including Schiff bases, Amadori products, advanced glycation end products (AGEs),2 and protein cross-links (21). Mechanisms to protect the cells against carbonyl/electrophile stress involve aldoketoreductases, which reduce carbonyls into alcohols (23); glyoxalases, which degrade glyoxals into acid-alcohols (24, 25); detoxification systems that form and export electrophile-glutathione conjugates (26), and fructosamine-3-kinases (FN3Ks), which, by phosphorylating lysine-fructosamines formed after Amadori rearrangement of protein lysines glycated by glucose, increase their rate of deglycation by a factor of three and release repaired proteins and 3-deoxyglucosone (27). Moreover, FN3K-related enzymes deglycate lysines glycated by ribose-5-phosphate and erythrose-4-phosphate, and prokaryotic amadoriases and fructosamine-6-kinases deglycate free lysine-fructosamines for metabolic purposes (26). Here, we show that DJ-1 is a major protein deglycase that repairs methylglyoxal- and glyoxal-glycated amino acids and proteins and releases deglycated proteins and lactate or glycolate, respectively.
EXPERIMENTAL PROCEDURES
DJ-1 Expression and Purification
The DJ-1 gene was amplified by PCR from a human kidney cDNA library and inserted into the expression plasmid pET-21a, and this recombinant plasmid was introduced into Escherichia coli strain BL21 (DE3) (7, 9). DJ-1 was purified as described previously (28). The C106S, C53S, and C46S DJ-1 mutants were expressed using recombinant pET-21a plasmids (7, 9) and purified as described previously (28).
Deglycation of N-Acetylcysteine, N-Acetylarginine, and N-Acetyllysine
Experiments were performed at 22 °C in N2-gassed 50 mm sodium phosphate buffer, pH 7.0. Glycation of NacCys by MGO and its deglycation by DJ-1 were monitored by hemithioacetal absorbance at 288 nm (29) and reverse phase (RP)-HPLC. Glycation/deglycation of NacArg and NacLys was followed by RP-HPLC: 80 mm NacArg was incubated at 22 °C in 150 μl of buffer with 80 mm MGO. After 40 min, the mixture was incubated with 4 μm DJ-1. Lactate was analyzed with d- and l-lactate dehydrogenases. For RP-HPLC, samples were injected into a Kromasil Eternity C18 column at 40 °C (for Cys and Lys) or a PrimeSep 200 column (for Arg). Mobile phase for isocratic elution (Cys and Lys) consisted of 25 mm monobasic sodium phosphate, 0.3 mm of the ion-pairing agent 1-octane sulfonic acid, and 4% (v/v) methanol at pH 2.7 adjusted with 85% phosphoric acid. For Arg experiments, the same mobile phase was used, and elution was achieved with a 4–10% methanol gradient. Column chromatography experiments were performed twice and produced similar results. For the measure of kinetic constants, glycated N-acetylcysteine, N-acetylarginine (from the 1.9-min peak in Fig. 1H), and N-acetyllysine were prepared by RP-HPLC and used immediately for Km and kcat determination. The results are the mean values of three experiments (S.E. was less than 15%).
Deglycation of BSA, GAPDH, Fructose 1,6-Biphosphate Aldolase, and Aspartate Aminotransferase
Experiments were performed in N2-gassed 50 mm sodium phosphate buffer (pH 7.0). Glycation/deglycation of BSA cysteine was followed by DTNB titration (30). BSA (700 μm) was incubated with 100 mm MGO for 110 min at 37 °C, separated by gel filtration on a Bio-Gel P2, and incubated at 22 °C in the absence or presence of DJ-1. Glycation/deglycation of GAPDH was followed by measurement of GAPDH activity (30) and titration of thiol groups. GAPDH from rabbit muscle (300 μm monomers) was incubated with 5 mm MGO at 22 °C for 40 min, separated from MGO by gel filtration, and incubated in the absence or presence of DJ-1. In experiments where DJ-1 was added to the initial glycation mixtures, GAPDH activity was measured by adding 5 μl of a 100-fold diluted glycation mixture to a cuvette containing 150 μl of substrates. Glycation/deglycation of BSA lysines was followed by measuring the absorbance at 333 nm (31). BSA was incubated in buffer at 22 °C in the absence or presence of 6 mm MGO and DJ-1, as indicated. MGO concentrations were measured with 2,4-dinitrophenylhydrazine (10), and lactate concentrations were determined using l- or d-lactate dehydrogenase. BSA arginines were measured using phenanthrenequinone (32). Glycation/deglycation of fructose bisphosphate aldolase A (from rabbit muscle; EC 4.1.2.13; Sigma) and aspartate aminotransferase (from pig heart, cytoplasmic; EC 2.6.1.1; Sigma) were followed by measuring enzymatic activities (33, 34), by detecting the glycated forms with anti-AGE antibodies (Cell Biolabs Inc.), and by mass spectrometry. Deglycation experiments were performed at least three times, and representative results are shown.
Measurement of MGO or GO Levels and Lactate or Glycolate Formation
DJ-1, MGO, or GO was added to N2-gassed 50 mm sodium phosphate buffer, pH 7.0, at 22 °C in a total volume of 70 μl. To measure the disappearance of MGO or GO, the reaction was stopped by the addition of 10 μl of reaction mixture to 120 μl of 0.1% 2,4-dinitrophenylhydrazine solution. The solution was incubated for 15 min at 22 °C, 160 μl of 10% NaOH was added, and absorbance was measured after 15 min at 540 nm for MGO and 570 nm for GO. The appearance of lactate was measured using l- or d-lactate dehydrogenase (35). Glycolate formation was measured by RP-HPLC (10). The results are the mean values of three experiments (S.E. was less than 15%).
Bacterial Strains, Bacterial Extracts, and Immunoblotting
The wild-type E. coli strain BL21 (DE3), the yajL mutant, and these two strains supplemented with the plasmids pCA24N-yajL and pET21a-DJ-1 (7) were grown overnight in Luria broth supplemented with 0.6% glucose. YajL and DJ-1 were induced with 1 mm isopropyl β-d-thiogalactopyranoside. Bacterial lysates were prepared by ultrasonic disruption of bacteria resuspended at A600 = 100 in 50 mm sodium phosphate, pH 7.0, and 50 mm NaCl. For immunoblotting with anti-AGE antibodies, 3,000 g of supernatants of bacterial lysates (10 μg) or purified proteins (0.2 μg, unless otherwise indicated) were separated by SDS-PAGE. Proteins were transferred to a nitrocellulose membrane and probed with anti-AGE antibodies, following the manufacturer's protocol (Cell Biolabs Inc.). Rabbit anti-YajL antibodies were prepared by Eurogentec, using purified YajL from our laboratory, and rabbit anti-DJ-1 antibodies were obtained from Abcam. For measuring cell viability, cultures were serially diluted from 102 to 106 and spotted (4 μl) onto LB plates, and growth was observed after 20 h of incubation at 30 °C. For the fluorescent analysis of total E. coli protein, the yajL mutant and the yajL mutant transformed with pET21a-DJ-1 (induced with isopropyl β-d-thiogalactopyranoside at A600 = 0.8) were grown at 37 °C in LB medium. At A600 = 1.2 (late exponential phase), MGO was added to half of the samples, and bacterial lysates were prepared at the indicated times after treatment. Lysates were dialyzed for 3 h against 50 mm sodium phosphate buffer, pH 7.0, and incubated for 48 h at 22 °C, and fluorescence (excitation at 350 nm, emission at 440 nm) was measured at a protein concentration of 0.5 mg/ml using an F-2000 Hitachi fluorometer. Bovine serum albumin at 0.5 mg/ml was used as a standard. Viability experiments, AGE detection experiments, and protein fluorescence analysis were performed three times; representative results are shown.
Mass Spectrometry
Aliquots (2 μg) of samples (FBP aldolase and glyoxal, FBP aldolase, glyoxal, and DJ-1) were digested overnight in solution at 37 °C with GluC protease (12.5 μg/ml; Sigma) in 20 mm sodium phosphate buffer, pH 7.8, containing 10% acetonitrile. Digests were analyzed in triplicate by an LTQ Velos Orbitrap mass spectrometer equipped with an EASY-Spray nanoelectrospray ion source and coupled to an EASY-nLC Proxeon 1000 chromatographic system (Thermo Fisher Scientific). Parameters used for peptides separation and mass spectrometry were as described previously (36). Label-free quantification was performed on raw data with Progenesis-LC software 4.1 (Nonlinear Dynamics). Peptide identification was performed with an in-house Mascot search server (Matrix Science, Boston, MA). The following modifications were used in dynamic modifications: oxidation (M), glyoxal (CKR), dehydrated-glyoxal (CKR), and deamidation (N, Q). The maximum number of missed cleavages by GluC was limited to two. Mass tolerance was set to 7 ppm for precursor ions and 0.5 Dalton for fragments. MS/MS data were searched against an Oryctolagus cuniculus database extracted from the NCBInr database. After the results were imported into Progenesis-LC software, and normalization of peptide abundances based on FBP peptides only was applied. Peptides with ion scores of less than 20 were rejected. Peptides with glyoxal or derived modifications and an analysis of variance score of less than 0.05 were considered.
RESULTS
Methylglyoxal and Glyoxal Metabolism
In addition to being an environmental toxin, methylglyoxal forms spontaneously from triosephosphates in all organisms (Scheme 1) and in minor amounts from threonine and acetone. Glyoxal is formed by lipid peroxidation and the degradation of saccharides and glycated proteins (21). The cellular concentrations of methylglyoxal and glyoxal are in the ranges 1–5 and 0.1–1 μm, respectively (21). Methylglyoxal and glyoxal are detoxified into lactate and glycolate, respectively, by the sequential action of glyoxalases 1 and 2 (24, 25) (Scheme 1), as well as by aldoketoreductases and efflux pumps (23, 26).
Methylglyoxal and glyoxal are potent glycating agents that form covalent adducts with cysteines, arginines, and lysines. With regard to the activity of methylglyoxal, reaction with a cysteine residue results in the rapid formation of a hemithioacetal, reaction with a lysine residue produces the aminocarbinol lysinemethylglyoxal glycosylamine, and reaction with an arginine residue forms the aminocarbinol arginine methylglyoxal glycosylamine and a 4,5-dihydroxy-5-methylimidazolidine derivative (Scheme 1). The lysine and arginine derivatives undergo dehydratation and/or rearrangement, which slowly lead to the formation of intermediate and AGEs, including Schiff bases, MG-H1 (derived from arginine), and carboxyethyllysine (Scheme 1). Protein glycation by glyoxal proceeds via similar reactions, producing the AGEs G-H1 (derived from arginine) and carboxymethyllysine (Lys-NH-CH2-COOH; not shown). The bifunctional carbonyls of methylglyoxal and glyoxal form cross-linked products, such as MOLD (methylglyoxal-lysine dimer) and GOLD (glyoxal-lysine dimer). Degradation of hemithioacetals and aminocarbinols by DJ-1 (Scheme 1), as described in the present work, prevents the formation of these AGEs.
DJ-1 Deglycates Cysteine, Arginine, and Lysine
N-Acetylcysteine Deglycation
We incubated equimolar concentrations of methylglyoxal and N-acetylcysteine for 2 min to form the hemithioacetal adduct (the product of the first reaction described below), which is detectable by its absorbance at 288 nm (29). We investigated hemithioacetal degradation in the presence of DJ-1 by measuring the decrease in absorbance at 288 nm and analyzing the reactants on a C18 RP-HPLC column (Fig. 1, A–C). The hemithioacetal was stable but exhibited a half-time of 30 min in the presence of 4 μm DJ-1 (Fig. 1, A and B). The Km and kcat of cysteine deglycation at 22 °C were 0.3 mm and 0.4 s−1 respectively (Table 1). Hemithioacetal degradation resulted in the quantitative formation of N-acetylcysteine and lactate (Fig. 1, B–D). Lactate analysis with l- and d-lactate dehydrogenases showed that NacCys deglycation produced 67% l-lactate and 33% d-lactate (Fig. 1D). The following reactions are likely to have occurred.
Thus, DJ-1 degrades the hemithioacetal formed between N-acetylcysteine and methylgloxal into N-acetylcysteine and a 67/33 mixture of l- and d-lactate.
TABLE 1.
Catalytic constant | N-Acetylcysteine | N-Acetylarginine | N-Acetyllysine |
---|---|---|---|
Km (mm) | 0.32 | 0.44 | 0.35 |
kcat (s−1) | 0.42 | 0.27 | 0.28 |
N-Acetyllysine Deglycation
We next incubated equimolar concentrations of NacLys and methylglyoxal for 40 min to form glycated NacLys, which is composed primarily of the aminocarbinol NacLys methylglyoxal glycosylamine, the product of the first reaction written below (29). RP-HPLC analysis of the glycation mixture after incubation shows the NacLys peak and the glycated NacLys peak. When the glycation mixture was incubated with 4 μm DJ-1, the glycated NacLys peak decreased, whereas the NacLys peak increased (Fig. 1, E and F), and quantitative formation of l-lactate occurred (Fig. 1, D and F). Thus, DJ-1 deglycates glycated N-acetyllysine into N-acetyllysine and lactate. The reactions likely to have occurred are described below in the paragraph dealing with NacArg.
N-Acetylarginine Deglycation
To form glycated NacArg, we incubated equimolar concentrations of NacArg and methylglyoxal for 40 min. Under similar conditions, Lo et al. (29) reported formation of the aminocarbinol NacArg-methylglyoxal glycosylamine (the product of the first reaction written below) and the imidazolidine formed by reaction of the ketone group of the aminocarbinol with the arginine imino group (Scheme 1). RP-HPLC analysis (PrimeSep200) of the glycation mixture (Fig. 1H) revealed a NacArg peak, a major NacArgglc peak (at 3.0 min) that likely contains the aminocarbinol formed with the arginine NH2, plus the corresponding imidazolidine, and a minor NacArgglc peak (at 1.9 min) that possibly contains the aminocarbinol formed with the arginine δ-NH group (see below). When the glycation mixture was incubated with 4 μm DJ-1, the two glycated NacArg peaks decreased, whereas the NacArg peak increased (Fig. 1, H and I), and quantitative formation of l-lactate occurred (Fig. 1, D and I). However, whereas degradation of the NacArgglc (aminocarbinol 2) eluting at 1.9 min was rapid (∼1 h, as with the degradation of NacCysglc and NacLysglc; Fig. 1G), degradation of NacArgglc eluting at 3.0 min displayed biphasic kinetics, with a rapid initial phase (which likely corresponds to degradation of aminocarbinol 1), and a slow exponential phase lasting several hours (τ½ = 2.8 h, corresponding to a catalytic constant of 0.7 × 10−4 s−1 at pH 7.0, 22 °C). The slow phase fits with degradation of the aminocarbinol formed upon displacement of the imidazolidine-aminocarbinol equilibrium, whose catalytic constant was reported to be 1.9 × 10−4 s−1 at pH 7.4 and 37 °C (29). For the degradation of aminocarbinols, the following reactions are likely to have occurred.
For NacArg, an aminocarbinol can also form with the arginine δ-NH group and imidazolidines by further reaction of aminocarbinols with the arginine imino group (Scheme 1).
These results suggest that DJ-1 degrades aminocarbinol intermediates formed upon arginine (or lysine) glycation by methylglyoxal, with the quantitative release of arginine (or lysine) and l-lactate. They also suggest that DJ-1, by displacing the imidazolidine-aminocarbinol equilibrium, allows indirect degradation of imidazolidine intermediates before they convert into irreversible AGEs, such as MG-H1, MG-H2, and MG-H3. Thus, in contrast with known deglycases, which only deglycate lysines (27), DJ-1 deglycates cysteines, arginines, and lysines, the three major glycated amino acids.
Catalytic Constants of DJ-1 and Importance of Cys106
We measured the catalytic constants of the deglycation of glycated N-acetylcysteine, N-acetylarginine, and N-acetyllysine by DJ-1 (Fig. 1J and Table 1). The Km and kcat of the three reactions were similar (∼0.4 mm for the Km and 0.3 s−1 for the kcat at 22 °C), suggesting that DJ-1 principally recognizes the glycated portion of these molecules. Moreover, these kcat values were in the same range as those of other enzymes involved in protein folding or repair, such as GroEL and thioredoxins (16, 17).
The crystal structure of DJ-1 combined with phylogenetic analysis and physiological studies underscored the importance of cysteine 106 in its function (1–3, 5), whereas Cys53 and Cys46 appear to play secondary roles. We investigated N-acetylcysteine deglycation by C106S, C53S, and C46S DJ-1 mutants and found that the C106S mutant was inactive, whereas the two other mutants displayed activities similar to those of wild-type DJ-1 (Fig. 1K). Thus, Cys106 is the nucleophile crucial for the deglycase activity of DJ-1.
DJ-1 Deglycates Glutathione and Protein Cysteines
We incubated equimolar concentrations of methylglyoxal and glutathione for 15 min to form the hemithioacetal adduct, which was detectable by its absorbance at 288 nm. The hemithioacetal was stable in the absence of DJ-1 but disappeared with a half-time of 30 min in the presence of 4 μm DJ-1 (Fig. 1L). Thus, although glutathione is not required as a co-factor for DJ-1, glycated glutathione, like glycated cysteine, constitutes a DJ-1 substrate.
BSA contains a single exposed cysteine (Cys34, titratable by DTNB) involved in oxidative stress protection. DJ-1 can repair this cysteine from sulfenylation (6). After BSA treatment with methylglyoxal for 110 min at 37 °C, the number of BSA-titrated cysteines decreased from 0.62 to 0.28 (Fig. 2A). We separated BSA from MGO by gel permeation chromatography and incubated 300 μm BSA at 22 °C, either alone or in the presence of 3 μm DJ-1. After addition of DJ-1, the titratable cysteines of BSA increased from 0.28 to 0.52 with a half-time of 2 min; in contrast, they remained constant in the absence of DJ-1 or in the presence of 5 mm glutathione (Fig. 2A). Thus, DJ-1 deglycates the exposed cysteine of BSA with a kobs of 0.3 s−1.
GAPDH performs covalent catalysis with its active site cysteine 150 (30). GAPDH activity decreased by 80% in the presence of 5 mm MGO, whereas DTNB-titrated cysteines decreased from 1.9 to 1.1, reflecting the covalent reaction of the active site cysteine with MGO (30) (Fig. 2B). We then separated GAPDH from MGO by gel permeation chromatography and incubated 60 μm GAPDH, either alone or in the presence of 2 μm DJ-1. In the absence of DJ-1, GAPDH activity decreased further, to 10% of its initial activity, whereas in its presence, it increased to 50% of its initial activity, with a half-time of 2 min. DTNB-titrated cysteines increased from 1.1 to 1.6 with similar kinetics. Thus, DJ-1 reactivates GAPDH by deglycating its active site cysteine. When 2 μm DJ-1 was added to the initial glycation mixture, GAPDH activity did not decrease, suggesting that DJ-1 deglycates GAPDH as glycation occurs, thereby preventing formation of deglycation-resistant intermediates. Moreover, when added to the initial glycation mixture, 2 μm DJ-1 fully protected 300 μm GAPDH against glycation by 5 mm glyoxal (Fig. 2C).
Remarkably, compared with in vivo concentrations, the concentrations of MGO and GO are >1000-fold higher (5 mm versus 1–5 μm for MGO and 0.1–1 μm for GO (25)), substrate protein concentrations are 9-fold lower (11 mg/ml GAPDH versus 100 mg/ml total cytoplasmic protein (25)), and DJ-1 concentrations are similar (2 μm in our experiment versus ∼1 μm in skin, 10 μm in brain, and 40 μm in liver). Thus, DJ-1 efficiently deglycates proteins in vitro, even though the workload is markedly heavier than in vivo.
DJ-1 Prevents Schiff Base Formation between Serum Albumin Lysines and MGO, but Does Not Degrade Schiff Bases
When proteins react with methylglyoxal, they exhibit an increase in light absorption between 300 and 400 nm, which can be attributed to the formation of Schiff base linkages between lysine side chains and MGO. (The initially formed aminocarbinol Lys-NH-CHOH-CO-CH3 dehydrates in minutes to hours to form the Schiff base Lys-N=CH-CO-CH3 (31) (Scheme 1)). When 70 μm BSA was incubated with 6 mm MGO for 3 h, its absorption spectrum displayed a shoulder between 300 and 370 nm. Remarkably, the shoulder was considerably lower when 3 μm DJ-1 was present in the BSA/MGO mixture (Fig. 2D). In samples containing 70 μm BSA, 6 mm MGO, and 1.5 or 3 μm DJ-1, the rate of Schiff base formation was reduced by severalfold compared with samples without DJ-1 (Fig. 2E), whereas the concentration of MGO decreased by less than 12% in 60 min. This result suggests that the anti-glycation effect of DJ-1 does not result from MGO depletion but instead from its deglycase activity; moreover, in samples containing MGO and DJ-1 (or MGO and BSA), the MGO concentration did not decrease significantly, suggesting that MGO depletion correlates with BSA deglycation (see below).
In contrast with its ability to prevent Schiff base formation, DJ-1 did not degrade Schiff bases. We glycated 70 μm BSA by treatment with 6 mm MGO for 2 h and then incubated glycated BSA (separated from MGO by gel permeation chromatography) with 4 μm DJ-1. We observed no decrease in BSA absorbance at 333 nm over 90 min, suggesting that DJ-1 was unable to deglycate Schiff bases (not shown). The ability of DJ-1 to prevent Schiff base formation, but not to degrade them, is consistent with its ability to degrade the aminocarbinol (Schiff base precursor). Consequently, the designation of Schiff bases (which form in hours) and Amadori products (which form in days) as early glycation intermediates should be revisited, because for DJ-1 these compounds represent late intermediates, whereas hemithioacetals and aminocarbinols, which form in seconds to minutes, represent early intermediates.
DJ-1 Deglycates Serum Albumin Arginines
Arginine is a major target of glycation by dicarbonyl compounds including methylglyoxal, with the initial formation of arginine-methylglyoxal glycosylamine, followed by dihydroxyimidazolidine, which is slowly dehydrated to produce arginine-derived hydroimidazolone MG-H1 (Scheme 1), the major methylglyoxal-derived AGE (25, 29). When 500 μm BSA was incubated at 37 °C with 20 mm MGO for 2 h, its titratable arginines decreased from 18.8 to 13.2 per BSA molecule as a consequence of arginine glycation, whereas they remained constant when 5 μm DJ-1 was added to the glycation mixture (Fig. 2F). Thus, DJ-1 efficiently deglycates BSA cysteines, lysines, and arginines.
DJ-1 Deglycates FBP Aldolase and Aspartate Transaminase
The active site of rabbit muscle FBP contains three lysines (Lys42, Lys108, and Lys230) and three arginines (Arg43, Arg149, and Arg303). As previously reported (33), 15 μm FBP was rapidly inactivated by 10 mm MGO (Fig. 3A). DJ-1 (4 μm) prevented (when added to the initial glycation mixture), stopped (when added after 10 min), or partially reversed (when added after 20 min) this inactivation (Fig. 3A). FBP was also inactivated by 5 mm GO, and 4 μm DJ-1 completely prevented this inactivation (Fig. 3B). As shown in Fig. 3C, in which aldolase was revealed with anti-AGE antibodies, DJ-1 afforded full protection against glycation of aldolase by glyoxal.
Aldolase glycation was also analyzed by mass spectrometry. DJ-1 prevented glycation of Arg22, Lys28, Lys42, Arg43, Lys111, Cys202, Lys208, Lys230, Lys243, Arg259, Cys290, Lys318, Lys330, Arg331, Cys339, and Lys342 (Fig. 3D and Table 2); glycation ratios in the absence or presence of DJ-1 ranged from 1.9 for Cys290 and 2.6 for Lys230 (two buried residues) to 330 for Lys243 and 980 for Lys42. The median glycation ratio was 25, reflecting the efficiency of DJ-1 in the presence of high glyoxal concentrations. Lys42, Arg43, and Lys230 are located in the active site, with Lys42 and Arg43 being involved in substrate binding (mutation of Arg43 results in 14-fold decrease in activity) and Lys230 forming a Schiff base with the substrate (mutation of Lys230 results in complete loss of activity). These results confirm that DJ-1 prevents glycation of cysteines, arginines, and lysines.
TABLE 2.
Sequence of glycated peptide | Modification and position in peptide | Amino acid | Glycation ratio | Analysis of variance | Mascot score |
---|---|---|---|---|---|
IAHRIVAPGKGILAADE | Glyoxal (Arg4) | Arg22 | 102 | 3.70E-05 | 23.93 |
LSDIAHRIVAPGKGILAADE | Glyoxal (Lys13) | Lys28 | 22 | 1.71E-06 | 40.01 |
STGSIAKRLQSIGTENTEE | Glyoxal (Lys7) | Lys42 | 980 | 1.12E-05 | 43.52 |
STGSIAKRLQSIGTENTEE | Glyoxal (Arg8) | Arg43 | 11 | 2.73E-03 | 38.45 |
KGVVPLAGTNGE | Glyoxal (Lys1) | Lys111 | 7.7 | 0.000105 | 75.07 |
LKRCQYVTE | Glyoxal (Cys4) | Cys202 | 5.4 | 3.14E-05 | 22.75 |
KVLAAVYKALSD | Glyoxal (Lys1) | Lys208 | 56 | 0.00995 | 47.56 |
GTLLKPNMVTPGHACTQKYSHEE | Glyoxal (Lys5) | Lys230 | 2.6 | 7.51E-05 | 22.41 |
Glyoxal (Lys18) | Lys243 | 330 | 1.02E-02 | 27.07 | |
IAMATVTALRRTVPPAVTGVTFLSGGQSEEE | Glyoxal (Arg11) | Arg259 | 27 | 0.000572 | 27.79 |
ASINLNAINKCPLLKPWALTFSYGRAL | Glyoxal (Cys11) | Cys290 | 1.9 | 0.0286 | 21.28 |
YVKRALANSLACQGKYTPSGQAGAAASE | Glyoxal (Lys3) | Lys330 | 25 | 0.0016 | 45.9 |
Glyoxal (Arg4) | Arg331 | 43 | 5.41E-05 | 22.83 | |
Glyoxal (Cys12) | Cys339 | 40 | 0.00195 | 38.72 | |
Glyoxal (Lys15) | Lys342 | 23 | 2.43E-06 | 62.1 |
The active site of cytoplasmic aspartate aminotransferase contains two arginines involved in aspartate binding and a lysine that forms a transient covalent bond with pyridoxal phosphate. As reported previously (34), aspartate aminotransferase (10 μm) activity was decreased by 20–90% by 1–5 mm methylglyoxal at 37 °C (Fig. 3E). The addition of 2 μm DJ-1, 30 min after the addition of MGO, rapidly restored (in 2 min) up to 90–100% of aspartate aminotransferase activity following 1–2 mm methylglyoxal stress and up to 60% after 5 mm methylglyoxal stress (Fig. 3E). As shown in Fig. 3C, DJ-1 afforded full protection against glycation by 2 mm methylglyoxal.
DJ-1 Deglycation
We incubated seven proteins (β-casein, DnaK, BSA, DJ-1, GAPDH, fructose biphosphate aldolase, and aspartate aminotransferase; 0.8 μg each) separately with 5 mm MGO for 4 h at 37 °C and assessed their glycation status using anti-AGE antibodies. All proteins, except DJ-1, reacted with anti-AGE antibodies (Fig. 3F, top panel), suggesting that they were glycated, especially because they did not react with anti-AGE antibodies in the absence of MGO treatment (Fig. 3F, middle panel). The lack of reaction between DJ-1 and anti-AGE antibodies is likely a result of DJ-1 deglycase activity, especially because a DJ-1 preparation that had lost 85% of its deglycase activity reacted with anti-AGE antibodies (Fig. 3F, bottom panel).
The Previously Reported Glyoxalase Activity of DJ-1 Reflects Its Deglycase Activity
DJ-1 has been reported to function as a glutathione-independent glyoxalase, displaying a 1,000-fold lower activity than the glutathione-dependent glyoxalases Glo1 and Glo2 (10). We demonstrate below that the apparent glyoxalase activity of DJ-1 reflects its deglycase activity. First, the kinetics of MGO degradation (at micromolar DJ-1 concentrations) displayed a lag, which was likely required for spontaneous formation of the substrate, glycated DJ-1 or glycated BSA. Duration of the lag ranged from 40 min at 1 μm DJ-1 to 5 min at 8 μm DJ-1 and 1 min in the presence of 15 μm BSA (Fig. 4A). Second, the apparent glyoxalase activity of DJ-1 increased in a linear fashion with the square of DJ-1 concentration, in accordance with DJ-1 being both an enzyme (deglycase) and a substrate (glycated DJ-1) (Fig. 4B). DJ-1 was dimeric at all concentrations tested, suggesting that this did not result from a monomer-dimer equilibrium with an active dimer (not shown) (37). Third, the negligible levels of apparent glyoxalase activity of DJ-1 (1.5 μm) were strongly stimulated by BSA, with an apparent Ka of ∼5 μm BSA (Fig. 4C). Stimulation by BSA was also observed when glyoxal was used as a glycating agent (Fig. 4C), and the amounts of glycolate produced were similar to those of GO consumed (not shown). These results are consistent with DJ-1 substrates being glycated proteins (DJ-1 or BSA in this section) instead of glyoxals, in accordance with the results presented above.
DJ-1 Protects Cells against Protein Glycation and Loss of Viability in Glucose-containing Media
E. coli contains three DJ-1 homologs, YajL, YhbO, and HchA, which are involved in resistance to environmental stresses (7, 28, 38–41) including carbonyl stress. YajL is the closest DJ-1 homolog, with YajL and DJ-1 displaying 40% sequence identity and a similar three-dimensional structure (42). In addition, the yajL mutant displayed the highest sensitivity to carbonyl stress.3 Glycation affects bacteria under standard laboratory conditions, leading to a decline in viability during the stationary phase, and the addition of excess glucose or methylglyoxal results in increased loss of viability (43). The yajL mutant (but not the parental strain) suffered from a 100-fold decrease in viability after incubation for 48 h in LB medium containing 0.6% glucose, and the mutant was rescued by YajL- and DJ-1-overproducing plasmids (Fig. 4D).
We also investigated the glycation status of protein extracts by probing immunoblots with anti-AGE antibodies. The wild-type strain displayed a small quantity of glycated proteins after overnight culture in LB medium supplemented with 0.6% glucose, whereas the yajL mutant displayed much higher levels of glycated proteins (Fig. 4, E and F). Protein glycation in both the wild-type strain and the yajL mutant was reduced when DJ-1 was expressed in these strains (Fig. 4, E and F).
We investigated further the effect of DJ-1 expression on glycation of the yajL mutant under basal and methylglyoxal stress conditions by examining the fluorescent properties of total protein isolated from E. coli cells (glycated proteins display increased fluorescence (Ex350 nm) in the 400–500-nm range (44). DJ-1 expression resulted in decreased protein glycation of the yajL mutant (Fig. 4G), both in the absence of exogenous carbonyl stress (DJ-1 alleviated the increase in protein glycation observed during the transition to the stationary phase of growth (44) (Fig. 4H)) and after the induction of stress with 2 mm methylglyoxal (Fig. 4I).
DISCUSSION
The literature on DJ-1 should be reconsidered in view of its deglycase activity.
DJ-1 Deglycase
To execute its deglycase activity, DJ-1 recruits its previously reported biochemical functions: (i) chaperone activity (4, 5, 28) to interact with non-native glycated proteins and gain access to partially buried glycated sites; (ii) glyoxalase 1 activity (10, 21) to interact with glycated substrates and convert hemithioacetals into thioesters, and aminocarbinols into amides; (iii) reactive cysteine 106 with a depressed pKa of 5.4 (3, 7), to attack carbonyl groups of thioesters and amides; (iv) glyoxalase 2 activity (10, 21) to cut thioesters for cysteine deglycation; and (v) amidase/peptidase activity (9, 45) to cut amide bonds for lysine/arginine deglycation.
Glutathione and Electrophile Stress
Whereas glutathione performs multiple roles in electrophile stress resistance, acting as a co-enzyme of glyoxalases and glutathione-dependent aldehyde dehydrogenases, a covalent acceptor of carbonyl compounds, and a substrate of glutathione S-transferases and multidrug resistance transporters (as a glutathione-electrophile conjugate), it is surpassed by DJ-1 for protein deglycation: glutathione is rather inefficient at degrading glycosylamines (Schiff bases) by transglycating glucose to itself (47), and in our hands, it was unable to deglycate cysteine and BSA. DJ-1 does not require glutathione as a co-factor; however, glycated glutathione constitutes a DJ-1 substrate, suggesting that DJ-1 may be involved in sanitizing the glutathione pool.
Neurodegenerative Diseases
The deglycase activity of DJ-1 suggests that DJ-1-associated Parkinsonism results from excessive protein glycation, which affects dopaminergic transmission in the substantia nigra. It also strengthens the role of protein glycation in the etiology of neurodegenerative diseases (48). Protein glycation promotes the deposition of proteins, because of protein denaturation and formation of protease-resistant cross-links, and increases protein aggregation in Alzheimer, Parkinson, and Huntington diseases. The extent of Tau, β-amyloid, synuclein, and huntingtin glycation is correlated with the pathologies of the patients (48). Moreover, glycation is responsible, via the AGE receptor, for an increase in oxidative stress and inflammation through the formation of reactive oxygen species and activation of NF-κB (49). In Alzheimer disease, the AGE receptor also stimulates the transport of β-amyloid across the blood brain barrier into the brain (49).
Glycation/Deglycation
The discovery of the deglycase activity of DJ-1 is a major advance in glycation research. Whereas scavengers involved in degradation and export of electrophiles (aldoketoreductases, glyoxalases, glutathione/glutathione S-transferases/efflux pumps) are relatively efficient, FN3Ks display more moderate functions in electrophile stress resistance (21, 27). Compared with FN3Ks, DJ-1 appears to be an overachiever: (i) its specific activity is 20,000-fold higher (kobs expressed in s−1 instead of d−1); (ii) it deglycates cysteines, arginines, and lysines (instead of only lysines); (iii) it deglycates all proteins tested; (iv) it operates immediately after glycation onset (whereas FN3K acts after the Amadori rearrangement); (iv) it releases innocuous products (lactate and glycolate) instead of dicarbonyl 3-deoxyglucosone; (v) it does not require any co-factors (whereas FN3K requires ATP); and (vi) in accordance with its efficiency, DJ-1−/− mice display Parkinson disease-type abnormalities and metabolic defects (3), whereas Fn3k−/− mice are healthy (although they do display higher levels of free and protein-bound fructosamines (27). Nevertheless, fructosamine-3-kinases and related enzymes are involved in defense against glycation by glucose, ribose-5-phosphate and erythrose-4-phosphate, whereas DJ-1 reverses glycation by glyoxals, which suggests that these enzymes possess complementary functions in providing protection against carbonyl stress. However, because glyoxals are by-products of carbohydrate metabolism, DJ-1 is also involved in preventing sugar-dependent glycation. Both sugars and dicarbonyls cause important glycation damage, with sugars being more concentrated than dicarbonyls (millimolar range instead of micromolar range) but less active (methylglyoxal is 24,000-fold more potent as a glycating agent than glucose (21)). If we consider the clinical urinary excretion of glycation free adducts by type 1 diabetic subjects, fructoselysine represents 22 nmol/mg creatinine, whereas adducts mainly derived from glyoxals-dependent glycation (carboxymethyllysine, carboxyethyllysine, G-H1, and MG-H1) represent 42 nmol/mg creatinine (22).
Consideration of the characteristics of DJ-1 deglycase changes our views on glycation and deglycation. First, it shortens the time scale of deglycation. Because DJ-1 catches glycation in the act, it appears that everything is settled at the onset of glycation, when it is still time for DJ-1-catalyzed deglycation. Consequently, with respect to glycation by dicarbonyl compounds, “late” should describe minutes or hours after glycation onset (29, this work) rather than days, months, or years after, as is often assumed. Second, hemithioacetals and aminocarbinols (DJ-1 substrates) that form immediately upon glycation, which are tacitly evoked in many glycation reviews (however, see Ref. 29 for a description of their formation) could be upgraded from a merely implicit status to the rank of early glycation products. Schiff bases, which form in minutes to hours, and Amadori products, which form in ∼2 days and are often referred to as “early glycation products,” could be reclassified as “intermediate glycation products.” Schiff bases, Amadori products, and AGEs might represent inherently irreversible (or quasi-irreversible) damage because of their stability, diversity, and/or weak chemical reactivity. This may explain the moderate deglycating efficiencies of fructosamine-3-kinases (27) and AGE breakers (50).
Oxidative Stress Resistance
The involvement of DJ-1 in oxidative stress resistance could be explained by its ability to induce or protect oxidative stress resistance enzymes (3) and protect the thiol proteome against sulfenylation (6). It might also result from interrelations between electrophile and oxidative stresses, as follows: (i) major oxidative stress-resistance proteins, including superoxide dismutases, thioredoxins, glutaredoxins, and peroxidases are inactivated by electrophile stress; (ii) glutathione is hotly contested by proteins involved in electrophile and oxidative stress resistance; and (iii) glycated proteins increase the production of reactive oxygen species (51).
It is debated whether Cys106 oxidation to sulfenic or sulfinic acid is incidental, detrimental, or important for cytoprotection by DJ-1 (3). For the repair of sulfenylated and glycated proteins, the reduced form of Cys106 is the active form (Ref. 6 and this work), and its low pKa favors formation of the thiolate anion, which is a more powerful nucleophile than the protonated form. These important functions of DJ-1 in protein repair reduce the probability (although do not eliminate it) of an important role for cysteine 106 oxidation in signaling (3).
Cancer and Apoptosis
The relationship between DJ-1 and cancer is still unclear. A number of reports suggest that DJ-1 is overexpressed in lung, prostate, breast, and pancreatic carcinomas and could be used as a biomarker for tumor diagnosis. We suggest that increased DJ-1 expression in tumors may result from the increased aerobic glycolysis of cancer cells, necessary to meet the metabolic requirements of cell proliferation (52) (the Warburg effect, a characteristic trait of Ras and Myc cancers (53)). High glycolytic/HMP rates produce elevated amounts of methylglyoxal and glycated proteins (21), resulting in the overexpression of DJ-1 and avoidance of methylglyoxal-induced toxicity and growth arrest. Glyoxalase 1, thioredoxins, and Nrf2 are also overexpressed in many tumors, providing a growth advantage by increasing chemoresistance or enhancing tumor cell growth (46, 53–55). Such a role for DJ-1 in supporting the viability or proliferation of tumor cells would be sufficient reason to use it as a tumor marker and target for anticancer drug development.
However, several results suggest that DJ-1 may perform more specific functions in cancer or cellular apoptosis. DJ-1 has been described as an oncogene that cooperates with H-Ras or Myc, as a positive effector of the AKT pathway (via PTEN inhibition) and a negative regulator of p53 transcriptional activity (3). DJ-1 was also described as an apoptosis inhibitor, acting by binding the pro-apoptotic proteins Daxx, BCL-XL, or FADD and by forming a mixed disulfide with the apoptotic regulating kinase ASK1 (3). Several of these results could be explained by the global functions of DJ-1 as a chaperone, a covalent chaperone, a major deglycase, and an anti-stress protein enhancing cell growth. Moreover, the levels of the proapoptotic or tumor-suppressor proteins ASK, PTEN, and p53, which contain active site cysteines (Cys250 (ASK), Cys124 (PTEN), Cys176, Cys238, and Cys242 (p53, zinc binding)) that may physiologically or artifactually react with DJ-1, could also be modified when DJ-1 is overexpressed, consequently generating some of the reported results.
Miscellaneous
Numerous roles for DJ-1 in unrelated functions could be explained by its extensive involvement in protein repair because any protein constitutes a potential DJ-1 substrate. Moreover, the ability of DJ-1 to repair cysteines, lysines, and arginines (frequently encountered in active sites) and the greater sensitivity of active site amino acids to glycation because of their accessibility or shifted pKa likely increase the occurrence of glycation-induced cellular defects and their correction by DJ-1.
Considering the novel function of DJ-1 and the fact that deglycation obviously constitutes its primary function, we propose that it be renamed DJ-1 deglycase. Although aldoketoreductases, glyoxalases, and multidrug detoxification systems decrease electrophile stressor pools, DJ-1 is a major protein bodyguard, providing front line defense against protein glycation. Finally, the discovery of the deglycase function of DJ-1 may constitute a major advance in biotechnology and for medical research, including aging, neurodegenerative diseases, cancer, atherosclerosis, arterial hypertension, postdiabetic, renal, and autoimmune diseases.
Acknowledgments
We thank Dr. Valerie Gautier for help in the early course of this work, Dr. Sun-Sin Cha for the gift of plasmids coding for wild-type and mutant DJ-1, Dr. Dominique Thierry for critical reading of the manuscript, and Professor Giuseppe Baldacci (Director of the Institut Jacques Monod) for constant support.
G. Richarme, M. Mihoub, and V. Gautier, unpublished results.
- AGE
- advanced glycation end product
- MGO
- methylglyoxal
- GO
- glyoxal
- CML
- carboxymethyl lysine
- G-H1
- N-(5-hydro-4-imidazolon-2-yl)ornithine
- MG-H1
- N-(5-hydro-5-methyl-4-imidazolon-2-yl)ornithine
- FN3K
- fructosamine-3-kinase
- FBP
- fructose-1,6-biphosphate
- RP
- reverse phase
- DTNB
- 5,5′-dithiobis(nitrobenzoic acid).
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