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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2015 Feb 11;71(Pt 3):m59–m60. doi: 10.1107/S2056989015002467

Tetra­aqua­bis­[2-(2-nitro­phen­yl)acetato-κO]cobalt(II)

Muhammad Danish a, Muhammad Nawaz Tahir b,*, Sana Iftikhar a, Muhammad Asam Raza a, Muhammad Ashfaq a
PMCID: PMC4350698  PMID: 25844208

Abstract

The mol­ecule of the title compound, [Co(C8H6NO4)2(H2O)4], is centrosymmetric. It is a cobalt(II) complex, bearing two (2-nitro­phen­yl)acetate and four aqua ligands. The coordination around the CoII atom is distorted octa­hedral, defined by four O atoms of water mol­ecules in the equatorial plane and by two carboxyl­ate O atoms at axial positions. The dihedral angles between the benzene ring and the acetate and nitro groups are 61.90 (10) and 19.21 (11)°, respectively. The water mol­ecules form O—H⋯O hydrogen bonds with the nitro and carboxyl­ate groups, leading to a layered structural arrangement parallel to (001).

Keywords: crystal structure, cobalt(II) complex, hydrogen bonding

Related literature  

The title compound is structurally related to tetra­aqua­bis(acetato-κO)cobalt(II) (Sobolev et al., 2003), tetra­aqua­bis­(2-nitro­phen­oxy­ethano­ato-κO)cobalt(II) dihydrate (Kennard et al., 1985), tetra­aqua­bis­((2,4-di­chloro­phen­oxy)acetato-κO)cobalt(II) dihydrate (Tan et al., 2011), tetra­aqua­bis­[2-(6-amino-9H-purin-9-yl)acetato-κO]cobalt(II) (Mishra et al., 2011) and tetra­aqua­bis­(3,5-di­nitro­benzoato-κO)cobalt(II) tetra­hydrate (Tahir et al., 1996).graphic file with name e-71-00m59-scheme1.jpg

Experimental  

Crystal data  

  • [Co(C8H6NO4)2(H2O)4]

  • M r = 491.27

  • Monoclinic, Inline graphic

  • a = 5.4431 (3) Å

  • b = 6.4313 (4) Å

  • c = 28.5697 (15) Å

  • β = 92.762 (2)°

  • V = 998.96 (10) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.93 mm−1

  • T = 296 K

  • 0.32 × 0.24 × 0.20 mm

Data collection  

  • Bruker Kappa APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2007) T min = 0.758, T max = 0.835

  • 8913 measured reflections

  • 2156 independent reflections

  • 1937 reflections with I > 2σ(I)

  • R int = 0.026

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.028

  • wR(F 2) = 0.070

  • S = 1.04

  • 2156 reflections

  • 154 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.27 e Å−3

  • Δρmin = −0.28 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 2012) and PLATON.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015002467/wm5121sup1.cif

e-71-00m59-sup1.cif (20.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015002467/wm5121Isup2.hkl

e-71-00m59-Isup2.hkl (118.7KB, hkl)

. DOI: 10.1107/S2056989015002467/wm5121fig1.tif

View of the asymmetric unit of title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H-atoms are shown as small circles of arbitrary radius.

. DOI: 10.1107/S2056989015002467/wm5121fig2.tif

A partial packing diagram of the title compound showing the layered organisation of mol­ecules held together by O—H⋯O inter­actions (dashed lines). H atoms not involved in hydrogen bonding are omitted for clarity.

CCDC reference: 1047494

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (, ).

DHA DH HA D A DHA
O5H5AO1i 0.82(2) 2.00(2) 2.7984(16) 166(2)
O5H5BO2ii 0.82(2) 1.89(2) 2.6797(17) 161(2)
O6H6AO2iii 0.78(2) 1.93(2) 2.6979(17) 169(2)
O6H6BO3 0.81(2) 2.22(2) 2.988(2) 159(2)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

The authors acknowledge the provision of funds for the purchase of the diffractometer and encouragement by Dr Muhammad Akram Chaudhary, Vice Chancellor, University of Sargodha, Pakistan.

supplementary crystallographic information

S1. Experimental

The sodium salt of (2-nitrophenyl)acetic acid was prepared by mixing aqueous solutions of (2-nitrophenyl)acetic acid and Na(HCO3) in the molar ratio 1:1. To this solution a 0.5 molar equivalent of cobalt(II) acetate was added and the mixture refluxed for 4 h. The resulting solution was evaporated for crystal growth. Light-orange prisms suitable for X-ray data collection were obtained after one week.

S2. Refinement

The coordinates of water H-atoms were refined freely, with Uiso(H) = 1.2Ueq(O). The other H-atoms were positioned geometrically (C—H = 0.93—0.97 Å) and refined as riding with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

View of the asymmetric unit of title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H-atoms are shown as small circles of arbitrary radius.

Fig. 2.

Fig. 2.

A partial packing diagram of the title compound showing the layered organisation of molecules held together by O—H···O interactions (dashed lines). H atoms not involved in hydrogen bonding are omitted for clarity.

Crystal data

[Co(C8H6NO4)2(H2O)4] F(000) = 506
Mr = 491.27 Dx = 1.633 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
a = 5.4431 (3) Å Cell parameters from 2154 reflections
b = 6.4313 (4) Å θ = 2.9–27.0°
c = 28.5697 (15) Å µ = 0.93 mm1
β = 92.762 (2)° T = 296 K
V = 998.96 (10) Å3 Prism, light-orange
Z = 2 0.32 × 0.24 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer 2156 independent reflections
Radiation source: fine-focus sealed tube 1937 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.026
Detector resolution: 7.80 pixels mm-1 θmax = 27.0°, θmin = 2.9°
ω scans h = −6→5
Absorption correction: multi-scan (SADABS; Bruker, 2007) k = −8→8
Tmin = 0.758, Tmax = 0.835 l = −36→36
8913 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.070 H atoms treated by a mixture of independent and constrained refinement
S = 1.04 w = 1/[σ2(Fo2) + (0.0339P)2 + 0.3677P] where P = (Fo2 + 2Fc2)/3
2156 reflections (Δ/σ)max < 0.001
154 parameters Δρmax = 0.27 e Å3
0 restraints Δρmin = −0.28 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Co1 1.0000 0.0000 0.0000 0.02745 (10)
O1 0.78213 (19) 0.21130 (18) 0.03439 (4) 0.0354 (3)
O2 1.0428 (2) 0.45515 (17) 0.06128 (4) 0.0349 (3)
O3 0.9861 (3) 0.1663 (2) 0.13936 (6) 0.0656 (4)
O4 1.2715 (3) 0.2897 (3) 0.18485 (7) 0.0860 (6)
O5 0.7121 (2) −0.21593 (19) −0.00252 (5) 0.0367 (3)
H5A 0.572 (4) −0.193 (3) −0.0126 (7) 0.044*
H5B 0.761 (4) −0.309 (3) −0.0197 (7) 0.044*
O6 1.1243 (2) −0.1312 (2) 0.06473 (5) 0.0396 (3)
H6A 1.089 (4) −0.249 (4) 0.0668 (7) 0.047*
H6B 1.076 (4) −0.079 (4) 0.0883 (8) 0.047*
N1 1.0723 (3) 0.3042 (2) 0.16413 (5) 0.0449 (4)
C1 0.8429 (3) 0.3604 (2) 0.06134 (5) 0.0302 (3)
C2 0.6512 (3) 0.4255 (4) 0.09495 (7) 0.0465 (5)
H2A 0.5280 0.5076 0.0776 0.056*
H2B 0.5702 0.3010 0.1056 0.056*
C3 0.7378 (3) 0.5481 (3) 0.13750 (6) 0.0360 (4)
C4 0.6146 (4) 0.7320 (3) 0.14716 (7) 0.0477 (5)
H4 0.4881 0.7762 0.1265 0.057*
C5 0.6733 (4) 0.8505 (3) 0.18614 (7) 0.0501 (5)
H5 0.5823 0.9693 0.1920 0.060*
C6 0.8658 (4) 0.7945 (3) 0.21649 (7) 0.0478 (5)
H6 0.9062 0.8753 0.2427 0.057*
C7 0.9977 (3) 0.6180 (3) 0.20765 (6) 0.0419 (4)
H7 1.1312 0.5804 0.2274 0.050*
C8 0.9304 (3) 0.4964 (2) 0.16911 (6) 0.0340 (4)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Co1 0.01995 (16) 0.02718 (16) 0.03467 (18) 0.00213 (11) −0.00444 (11) −0.00896 (12)
O1 0.0242 (5) 0.0371 (6) 0.0445 (7) 0.0033 (5) −0.0030 (5) −0.0170 (5)
O2 0.0296 (6) 0.0312 (6) 0.0437 (7) 0.0001 (5) −0.0005 (5) −0.0103 (5)
O3 0.0995 (13) 0.0358 (8) 0.0613 (9) 0.0115 (8) 0.0019 (9) −0.0049 (7)
O4 0.0700 (11) 0.0865 (13) 0.0987 (14) 0.0409 (10) −0.0245 (10) −0.0129 (11)
O5 0.0227 (6) 0.0368 (6) 0.0501 (7) 0.0005 (5) −0.0034 (5) −0.0142 (6)
O6 0.0452 (7) 0.0307 (6) 0.0417 (7) 0.0038 (5) −0.0094 (6) −0.0072 (5)
N1 0.0545 (10) 0.0427 (9) 0.0380 (8) 0.0124 (7) 0.0064 (7) 0.0062 (7)
C1 0.0244 (8) 0.0328 (8) 0.0328 (8) 0.0075 (6) −0.0058 (6) −0.0059 (6)
C2 0.0287 (9) 0.0635 (12) 0.0468 (11) 0.0016 (8) −0.0009 (8) −0.0240 (9)
C3 0.0286 (9) 0.0451 (9) 0.0345 (9) 0.0011 (7) 0.0027 (7) −0.0089 (7)
C4 0.0394 (10) 0.0592 (12) 0.0439 (10) 0.0161 (9) −0.0047 (8) −0.0120 (9)
C5 0.0569 (12) 0.0461 (11) 0.0473 (11) 0.0134 (9) 0.0030 (9) −0.0123 (9)
C6 0.0560 (12) 0.0498 (11) 0.0374 (10) 0.0006 (9) 0.0010 (8) −0.0146 (8)
C7 0.0417 (10) 0.0530 (11) 0.0305 (8) 0.0021 (8) −0.0034 (7) −0.0011 (8)
C8 0.0351 (9) 0.0353 (9) 0.0319 (8) 0.0026 (7) 0.0054 (7) 0.0003 (7)

Geometric parameters (Å, º)

Co1—O1i 2.0810 (11) C1—C2 1.511 (2)
Co1—O1 2.0810 (11) C2—C3 1.505 (2)
Co1—O5 2.0925 (12) C2—H2A 0.9700
Co1—O5i 2.0925 (12) C2—H2B 0.9700
Co1—O6 2.1141 (13) C3—C8 1.391 (2)
Co1—O6i 2.1141 (13) C3—C4 1.394 (3)
O1—C1 1.2637 (18) C4—C5 1.374 (3)
O2—C1 1.2473 (19) C4—H4 0.9300
O3—N1 1.214 (2) C5—C6 1.376 (3)
O4—N1 1.213 (2) C5—H5 0.9300
O5—H5A 0.82 (2) C6—C7 1.373 (3)
O5—H5B 0.82 (2) C6—H6 0.9300
O6—H6A 0.78 (2) C7—C8 1.385 (2)
O6—H6B 0.81 (2) C7—H7 0.9300
N1—C8 1.468 (2)
O1i—Co1—O1 180.0 O2—C1—C2 119.65 (14)
O1i—Co1—O5 89.61 (5) O1—C1—C2 115.40 (14)
O1—Co1—O5 90.39 (5) C3—C2—C1 117.33 (14)
O1i—Co1—O5i 90.39 (5) C3—C2—H2A 108.0
O1—Co1—O5i 89.61 (5) C1—C2—H2A 108.0
O5—Co1—O5i 180.0 C3—C2—H2B 108.0
O1i—Co1—O6 89.23 (5) C1—C2—H2B 108.0
O1—Co1—O6 90.77 (5) H2A—C2—H2B 107.2
O5—Co1—O6 88.44 (5) C8—C3—C4 115.41 (16)
O5i—Co1—O6 91.56 (5) C8—C3—C2 126.60 (16)
O1i—Co1—O6i 90.77 (5) C4—C3—C2 117.98 (16)
O1—Co1—O6i 89.23 (5) C5—C4—C3 122.40 (18)
O5—Co1—O6i 91.56 (5) C5—C4—H4 118.8
O5i—Co1—O6i 88.44 (5) C3—C4—H4 118.8
O6—Co1—O6i 180.00 (6) C4—C5—C6 120.38 (18)
C1—O1—Co1 130.14 (10) C4—C5—H5 119.8
Co1—O5—H5A 125.5 (15) C6—C5—H5 119.8
Co1—O5—H5B 103.7 (14) C7—C6—C5 119.33 (17)
H5A—O5—H5B 104 (2) C7—C6—H6 120.3
Co1—O6—H6A 112.4 (16) C5—C6—H6 120.3
Co1—O6—H6B 117.5 (16) C6—C7—C8 119.51 (17)
H6A—O6—H6B 104 (2) C6—C7—H7 120.2
O4—N1—O3 122.64 (18) C8—C7—H7 120.2
O4—N1—C8 118.61 (17) C7—C8—C3 122.90 (16)
O3—N1—C8 118.75 (16) C7—C8—N1 115.63 (16)
O2—C1—O1 124.94 (15) C3—C8—N1 121.46 (15)
Co1—O1—C1—O2 25.0 (2) C6—C7—C8—C3 2.2 (3)
Co1—O1—C1—C2 −156.08 (13) C6—C7—C8—N1 −176.35 (17)
O2—C1—C2—C3 −20.9 (3) C4—C3—C8—C7 −0.1 (3)
O1—C1—C2—C3 160.19 (17) C2—C3—C8—C7 −179.68 (18)
C1—C2—C3—C8 −50.9 (3) C4—C3—C8—N1 178.29 (16)
C1—C2—C3—C4 129.5 (2) C2—C3—C8—N1 −1.3 (3)
C8—C3—C4—C5 −2.3 (3) O4—N1—C8—C7 −19.3 (3)
C2—C3—C4—C5 177.3 (2) O3—N1—C8—C7 160.92 (17)
C3—C4—C5—C6 2.6 (3) O4—N1—C8—C3 162.21 (19)
C4—C5—C6—C7 −0.5 (3) O3—N1—C8—C3 −17.6 (3)
C5—C6—C7—C8 −1.8 (3)

Symmetry code: (i) −x+2, −y, −z.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O5—H5A···O1ii 0.82 (2) 2.00 (2) 2.7984 (16) 166 (2)
O5—H5B···O2i 0.82 (2) 1.89 (2) 2.6797 (17) 161 (2)
O6—H6A···O2iii 0.78 (2) 1.93 (2) 2.6979 (17) 169 (2)
O6—H6B···O3 0.81 (2) 2.22 (2) 2.988 (2) 159 (2)

Symmetry codes: (i) −x+2, −y, −z; (ii) −x+1, −y, −z; (iii) x, y−1, z.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: WM5121).

References

  1. Bruker (2007). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  3. Kennard, C. H. L., Stewart, S. W., O’Reilly, E. J., Smith, G. & White, A. H. (1985). Polyhedron, 4, 697–705.
  4. Mishra, A. K., Kumar, J., Khanna, S. & Verma, S. (2011). Cryst. Growth Des. 11, 1623–1630.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Sobolev, A. N., Miminoshvili, E. B., Miminoshvili, K. E. & Sakvarelidze, T. N. (2003). Acta Cryst. E59, m836–m837. [DOI] [PubMed]
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015002467/wm5121sup1.cif

e-71-00m59-sup1.cif (20.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015002467/wm5121Isup2.hkl

e-71-00m59-Isup2.hkl (118.7KB, hkl)

. DOI: 10.1107/S2056989015002467/wm5121fig1.tif

View of the asymmetric unit of title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H-atoms are shown as small circles of arbitrary radius.

. DOI: 10.1107/S2056989015002467/wm5121fig2.tif

A partial packing diagram of the title compound showing the layered organisation of mol­ecules held together by O—H⋯O inter­actions (dashed lines). H atoms not involved in hydrogen bonding are omitted for clarity.

CCDC reference: 1047494

Additional supporting information: crystallographic information; 3D view; checkCIF report


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